BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472808 Length=1624 Score E Sequences producing significant alignments: (Bits) Value AT1G26090.1 | Symbols: | P-loop containing nucleoside triphosp... 2518 0.0 AT1G26100.1 | Symbols: | Cytochrome b561/ferric reductase tran... 364 1e-99 > AT1G26090.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:9020380-9022769 FORWARD LENGTH=1647 Length=1647 Score = 2518 bits (1363), Expect = 0.0 Identities = 1548/1636 (95%), Gaps = 17/1636 (1%) Strand=Plus/Plus Query 1 GTAGAACGCAAACGTGAATTGTGT-T-AGCTCCGATCACTCCTTTTATCACAAGCGGCTC 58 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 16 GTAGAACGCAAACGTGAATTGTGTGTCAGCTCCGATCACTCCTTTTATCACAAGCGGCTC 75 Query 59 TAGTTAAGCTCCGGCCAATCTGATCTTTTGAATTTTACACCCaaaaa-aaaaaaaaTGGT 117 |||| ||||||||||||||||||||||||||||||||| ||||||| || || |||||| Sbjct 76 TAGTGGAGCTCCGGCCAATCTGATCTTTTGAATTTTACA-CCAAAAATAATAATAATGGT 134 Query 118 GGCTTTGGTC---GCTTCT-T--CATGCTCAAGCCTAACTCTGAATCTCCTTCCCATCCT 171 | |||||||| ||||| | ||||||||||||| |||||||||||||||||||| || Sbjct 135 GTCTTTGGTCAATTCTTCTCTAACATGCTCAAGCCTTACTCTGAATCTCCTTCCCATTCT 194 Query 172 TCGTACGGAAGCACCTTCACTCTCCAGGAAGCGTCGACCAGCTTCTGTGGTGGCAACATC 231 ||||||||| |||||||||||||||||||||||||| |||||| ||||| ||| ||||| Sbjct 195 GCGTACGGAAACACCTTCACTCTCCAGGAAGCGTCGAGCAGCTTATGTGGCGGCTACATC 254 Query 232 TTCTAGAGATGACAACGATACCGTCGCTGATTCTTCTCAGAAACCCACCAAATTCGTCAC 291 ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 255 TTCTAGAGATGTTAACGATACCGCCGCTGATTCTTCTCAGAAACTCACCAAATTCGTCAC 314 Query 292 ATTTCTCGGCAAAGGCGGCTCCGGAAAGACCACCGCCGCTGTTTTCGCCGCTCAGCATTA 351 |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 315 CTTTCTCGGAAAAGGCGGCTCCGGCAAGACCACCGCCGCTGTTTTCGCCGCTCAGCATTA 374 Query 352 CGCATTGGCTGGGCTCAGTACATGTTTAGTGGTACATAATCAAGACCCTTCTGCTGATTT 411 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || Sbjct 375 CGCATTGGCTGGGCTCAGTACATGTTTGGTGATACATAATCAAGACCCTTCTGCTGAATT 434 Query 412 CCTCCTTGGAAGCAAGATTGGGACTTCTCCTACCTTGATCAACGACAATCTCTCTGTGAT 471 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 435 CCTCCTTGGAAGCAAGATTGGGACTTCTCCTACCTTGATCAACGACAATCTCTCTGTCAT 494 Query 472 TAGGCTCGAAACCACAAAAATGCTTCTAGAACCTCTTAAACAGCTGAAGCAAGCAGATGC 531 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 495 TAGGCTAGAAACCACAAAAATGCTTCTAGAACCTCTTAAACAGCTGAAGCAAGCAGATGC 554 Query 532 TCGACTTAATATGACCCAAGGGGTTCTTGAAGGGGTGGTTGGAGAAGAGCTAGGAGTACT 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 555 TCGACTTAATATGACCCAAGGGGTTCTTGAAGGGGTGGTTGGAGAAGAGCTAGGAGTACT 614 Query 592 TCCAGGGATGGATTCCATCTTTTCAATGCTTGAACTTGAGAGGCTTGCTGGTTTCTTTAG 651 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 615 TCCAGGGATGGATTCCATCTTTTCAATGCTTGAACTCGAGAGGCTTGTTGGTTTCTTTAG 674 Query 652 GCAAGCAACCCGAATGAACCACAAGGGGGAA-CCTTTTGACGTTATCATTTACGATGGCA 710 |||||||||||||| ||| ||||||||| || |||||||||||||| ||||| ||||||| Sbjct 675 GCAAGCAACCCGAAAGAATCACAAGGGG-AAGCCTTTTGACGTTATAATTTATGATGGCA 733 Query 711 TTAGCTCTGAGGAAACTCTTCGGATGATAGGTCTAAGCAGTAAAACAAGATTGTATGTGA 770 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 734 TTAGCACTGAGGAAACTCTTCGGATGATAGGTCTAAGCAGTAAAACAAGATTGTATGCGA 793 Query 771 GATATCTGAGAAGTTTGGCCGAGAAGACAGATTTGGGGAGGCTAACAAGTCCTTCCATTA 830 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 794 AATATCTGAGAAGTTTGGCCGAGAAGACAGATTTGGGGAGGCTAACAAGTCCGTCCATTA 853 Query 831 TGAGATTTGTTGATGAGTCCATGAACATAAGCGGCAATAAGTCGCCTTTTGATGGTATGA 890 ||||||||||||||||||| |||||||||| | | |||||||||||||| |||||||||| Sbjct 854 TGAGATTTGTTGATGAGTCAATGAACATAAACAGTAATAAGTCGCCTTTCGATGGTATGA 913 Query 891 CAAGTCCTGCCATGTGGGATACTTTGGAACGTTTCTGGGAGACCGGTGCTTCTGCTTGGA 950 |||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||| Sbjct 914 CAAGTCCTGCCATGTGGGATACTTTGGAACGTTTCTTGGAGACTGGCGCTTCTGCTTGGA 973 Query 951 GAGATCCAGAGAGATTCAGGAGTTTTCTTGTAATGGACCCAAATAATCCTATGTCTGTTA 1010 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 974 GAGATCCAGAGAGATTCAGGAGTTTTCTTGTAATGGACCCAAACAATCCTATGTCTGTTA 1033 Query 1011 AAGCCGCATTACGGTATTGGGGATGTACAGTACAAGCAGGATCTCATGCTTCTGGGGTGT 1070 |||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||| || Sbjct 1034 AAGCTGCATTACGGTATTGGGGTTGTACAGTACAAGCAGGATCTCATGTTTCTGGGGCGT 1093 Query 1071 TTGCTATTTCTTCTTCTCATCCGACAAGCAAAATCCCAGAA-GAAGATTTTGTGCCGCTG 1129 ||||||||||||||||||||| ||| ||| ||||||| ||| | |||||||||||| ||| Sbjct 1094 TTGCTATTTCTTCTTCTCATCTGACCAGCCAAATCCC-GAAAGCAGATTTTGTGCCACTG 1152 Query 1130 CCCTTTGCATCTGCATCAGTTCCATTTACTATAACTGGTCTGGATTGGGACAAAATCCTG 1189 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1153 CCATTTGCTTCTGCATCAGTTCCATTTACTATAACTGGTCTGGATTGGGACAAAATTCTG 1212 Query 1190 CTGGACCAAGCGAATTCAAGTATCCGGGAACTTCTTTCTGAAACTGTTAGCCATGGAACC 1249 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct 1213 CTGGACCAAGCGAATTCAAGTATCCGGGAACTTCTCTCTGAAACTGTAAGCCATGGGACC 1272 Query 1250 AGCTTGACACAAACAGTAATGTTTGATTCAGCAAAGAAATTGGTGACTCTTTTCATGCCG 1309 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1273 AGCTTGACACAAACAGTAATGTTTGATACAGCAAAGAAATTGGTGACTCTTTTCATGCCG 1332 Query 1310 GGGTTTGAAAAATCGGAAATCAAACTGTATCAGTACAGAGGAGGTTCTGAGCTCTTAATA 1369 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1333 GGGTTTGAAAAATCAGAAATCAAACTGTATCAGTATAGAGGAGGTTCTGAGCTCTTAATA 1392 Query 1370 GAAGCTGGGGACCAAAGACGTGTGATTCATTTGCC-TCCTCAGATTCAAGGAAAAGTTGG 1428 |||||||||||||||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct 1393 GAAGCTGGGGACCAAAGACGAGTGATTCATTTACCGTC-TCAGATTCAAGGAAAAGTTGG 1451 Query 1429 TGGAGCAAAGTTTCTGGACAGAAGTCTCATCATCACAATGCGGTGATACATTTTCGAAGA 1488 |||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct 1452 AGGAGCAAAGTTTGTGGACAGAAGTCTCATCGTCACAATGCGGTAATACATTTTCGAAGA 1511 Query 1489 ACTAATTTGTTCTTTTTGTACACCAGAGATGTGTAGTTTGTCCCCAAAACCAATACAAAC 1548 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1512 ACTAATTTGTTCTTTTTGTACACCAGAGATGTGTAGTTTGTCCCCAAA-CCAATACAAAC 1570 Query 1549 TAAAAAGAATGAAGATTAAAAACTCAAGAAGACAAACATTTGGGACGATCTTGAGATGAA 1608 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1571 TAAAAAGAATGAAAATTAAAAACTCAAGAAGACAAACATTTAGGACGATCTTGAGATGAA 1630 Query 1609 TAAACGAGTTTCTCAT 1624 |||||||||||||||| Sbjct 1631 TAAACGAGTTTCTCAT 1646 > AT1G26100.1 | Symbols: | Cytochrome b561/ferric reductase transmembrane protein family | chr1:9022542-9024081 REVERSE LENGTH=885 Length=885 Score = 364 bits (197), Expect = 1e-99 Identities = 219/229 (96%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1397 CATTTGCC-TCCTCAGATTCAAGGAAAAGTTGGTGGAGCAAAGTTTCTGGACAGAAGTCT 1455 ||||| || | |||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 885 CATTTACCGT-CTCAGATTCAAGGAAAAGTTGGAGGAGCAAAGTTTGTGGACAGAAGTCT 827 Query 1456 CATCATCACAATGCGGTGATACATTTTCGAAGAACTAATTTGTTCTTTTTGTACACCAGA 1515 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 826 CATCGTCACAATGCGGTAATACATTTTCGAAGAACTAATTTGTTCTTTTTGTACACCAGA 767 Query 1516 GATGTGTAGTTTGTCCCCAAAACCAATACAAACTAAAAAGAATGAAGATTAAAAACTCAA 1575 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 766 GATGTGTAGTTTGTCCCCAAA-CCAATACAAACTAAAAAGAATGAAAATTAAAAACTCAA 708 Query 1576 GAAGACAAACATTTGGGACGATCTTGAGATGAATAAACGAGTTTCTCAT 1624 |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 707 GAAGACAAACATTTAGGACGATCTTGAGATGAATAAACGAGTTTCTCAT 659 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80220470910 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5