BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472901 Length=1042 Score E Sequences producing significant alignments: (Bits) Value AT1G24470.1 | Symbols: KCR2, ATKCR2 | beta-ketoacyl reductase 2... 1600 0.0 > AT1G24470.1 | Symbols: KCR2, ATKCR2 | beta-ketoacyl reductase 2 | chr1:8674056-8676408 FORWARD LENGTH=1070 Length=1070 Score = 1600 bits (866), Expect = 0.0 Identities = 974/1024 (95%), Gaps = 16/1024 (2%) Strand=Plus/Plus Query 1 ATGCAGAGAGCATGCATCTCCGAGAGTCAGCCATGGCATCTCCATGTCGTATGCTTCATA 60 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 1 ATGCAGGGAGCATGCATCTCCGAGAGTCAGCCATGGTATCTCCATTTCGTATGCTTCATA 60 Query 61 GGCTTTCTCTCTCTCCTTAGATTACTATTCATTCCTCTCCTAAAATGGTTCATCACCAGA 120 |||||||||| |||||||||| |||||||||||||||||||||||||||||| ||| ||| Sbjct 61 GGCTTTCTCTTTCTCCTTAGAGTACTATTCATTCCTCTCCTAAAATGGTTCACCACAAGA 120 Query 121 TTCCTCCTCACAAACCCCAAGCGGCTCAAGCGGTACGGCTCATGGGCTATGGTCACTGGA 180 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TTCCTCCTCAC--A-CCCAAGCGGCTCAAGCGGTACGGCTCATGGGCTATGGTCACTGGA 177 Query 181 GCCACCGAGGGGATCGGACGTGCCTTTGCTTACGAGCTGGCCAAACACGGCCTTAACCTC 240 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 178 GCCACCGAGGGGATCGGACGCGCCTTTGCTCACGAGCTGGCCAAACACGGCCTTAACCTC 237 Query 241 ATCCTAGTCAGCAGAAACCTTTCGAAGCTCGAATATGTCTCTGATGATTTCCAACAAGAG 300 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 238 ATCCTAGTCAGCAGAAACCTTTCGAAGCTCGAATCTGTCTCTGATGATTTCCAACAAGAG 297 Query 301 TTTCCCCATATCAAGATCAAGATCATTCCATTTGACTTCTCCTCTGAAGGAGGATATGGA 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 298 TTTCCCCACATCAAGATCAAGATCATTCCATTTGACTTCTCCTCTGAAGGAGGATACGGA 357 Query 361 GCAATCGAGGAAGGGATAAAAGGCCTTGAAGTTGGGATTTTGATAAACAACGTCGGTATT 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 358 GCAATCGAGGAAGGGATAAAAGGCCTTGAAGTTGGGATTTTGATAAACAACGTTGGTATT 417 Query 421 ACTTATCCACGGGCCATGTTCTTCCACGAGGTTGACCAACTTACATGGACCAAAATCCTG 480 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 ACTTATCCACGCGCCATGTTCTTCCACGAGGTTGACCAACTTACATGGACCAAAATCCTG 477 Query 481 AGGGTTAATCTTGAAGCCACCACTTGGGTCACACGATCACTCATCGGGCCAATGCTTCAC 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 478 AGGGTTAATCTTGAAGCCACCACTTGGGTCACACGATCACTCATCGGACCAATGCTTCAC 537 Query 541 CGCCGCCGAGGAGCCATCGTCAATATTAGCTCCGGTGCTGCCGTTGTTGTCCCTTCTCAT 600 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 538 CGCCGCCGTGGAGCCATCGTCAATATTAGCTCCGGCGCTGCCGTTGTTGTCCCTTCTCAT 597 Query 601 CCTCTCTACGCCATCTACGCCGCCACCAAAGCTTATGTTGATGCACTATCAAGATCTCTA 660 || ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 598 CCCCTCTACGCCATCTACGCTGCCACCAAAGCTTATGTGGATGCACTATCAAGATCTCTA 657 Query 661 CATGTGGAATATAAGCAGTTTGGTATTGATGTCCAGTGCCAGGTGCCCTTATACGTAG-C 719 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | Sbjct 658 CATGTGGAATATAAGCAGTTTGGTATTGATGTCCAGTGCCAGGTTCCCTTATACGT-GTC 716 Query 720 AACAAGGATGGTGTCAGAAGTGGCAGCTATAGACAAACCAAGCTTCTTTGTACCGTCGCC 779 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 717 AACAAGGATGGTGTCAGAAGTGGCAGCTATAGACAAACCTAGCTTATTTGTACCGTCGCC 776 Query 780 TGAAGTCTACGCAAAAGCGGCGGTGGAACAGATCGGAATTGGATCTCGTTGCTCGCCGTT 839 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 777 TGAAGTCTACGCAAAAGCGGCGGTGGCGCAGATCGGAATTGGATCACGTTGCTCGCCGTT 836 Query 840 TTGGGCTCATTCCCTTCAGTGGTTTCTTGTCGGATTTGTGCCGGATAGCCTCGTTGATAC 899 |||||||||||| ||||||||||||||||| ||| |||| ||||||| ||| |||||||| Sbjct 837 TTGGGCTCATTCTCTTCAGTGGTTTCTTGTTGGACTTGTACCGGATAACCTTGTTGATAC 896 Query 900 TTGGCGTCTCTCTATCGGACTTCGCAGAAGAAGTTAATTATCTTAAAATGCTTATGATCA 959 ||||||||||||||||||||||||||||||||||| | ||||||| || || || | Sbjct 897 TTGGCGTCTCTCTATCGGACTTCGCAGAAGAAGTT--T-ATCTTAA--TG---ATCAT-A 947 Query 960 TATTTCAAGTTTTTATTTGCTCCTCCACCTTTCGTGGGATAAATATATGGCCCATTGGGC 1019 | |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 948 T-TTTCAAGTTTGTATTTGCTCCTCCACCTTTCGTGG-ATAAATATATGGCCCATTGGGC 1005 Query 1020 CTGA 1023 |||| Sbjct 1006 CTGA 1009 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51088127499 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5