BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473272 Length=2954 Score E Sequences producing significant alignments: (Bits) Value AT1G30470.1 | Symbols: | SIT4 phosphatase-associated family pr... 3969 0.0 > AT1G30470.1 | Symbols: | SIT4 phosphatase-associated family protein | chr1:10779171-10786666 FORWARD LENGTH=2939 Length=2939 Score = 3969 bits (2149), Expect = 0.0 Identities = 2398/2517 (95%), Gaps = 22/2517 (1%) Strand=Plus/Plus Query 1 AAGAAGCACTACCCCTCCCGCAATTGAAGGTTCTCTTCGTCGCTCACATTCC-ATCTCTT 59 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 11 AAGAAGCACTACCCCTCCCGCAATTGAAGGTTCTCTTCGTCGCTCACA-TCCAATCTCTA 69 Query 60 TCGATCTCAGATTCCAATTCCTGCGAATTTTTTCTTCCCATAGAGATTACAGATTCTAGG 119 ||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct 70 TCGATCTCAGATTCCAATTTCTGCGAATATTTTCTTCCCAGAGAGATTACAGATTCTAGG 129 Query 120 GTTTCG-ATAGCTTCTTTCCAATCGAGTTTTCTT-CTTTTATCTCT-GGGACGAAATTTC 176 |||||| |||| |||||||||||| ||| ||||| ||||| | ||| ||| ||||||||| Sbjct 130 GTTTCGAATAG-TTCTTTCCAATCTAGTCTTCTTCCTTTTGTTTCTCGGG-CGAAATTTC 187 Query 177 CCTTAGGGTTTCGAAGATCCGAATCTGTGGACGGAGGCAATTCGACGtttttttCTTTGA 236 |||||||||||||||||||||||||||||||||||| |||||||||| | ||| |||| Sbjct 188 CCTTAGGGTTTCGAAGATCCGAATCTGTGGACGGAGACAATTCGACG---TCTTC-TTGA 243 Query 237 GCTGCAAAGATGTTCTGGCGAATGGCGGGATTGTCAACGGCGTCTGCCGTTGAAGCAATT 296 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 244 GCTGCAAAGATGTTCTGGCGAATGGCTGGATTATCAACGGCGTCTGCCGTTGAAGCAATT 303 Query 297 TTGGATAAAGATAGTTTCACATTAGAGGACCTTCTTGACGAGGATGAAATTATTCAAGAA 356 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 304 TTGGATAAAGATAGTTTCACATTAGAGGATCTTCTTGACGAGGATGAAATTATTCAAGAA 363 Query 357 TGCAAAGCCCTGAACGGACGACTCTTAAATTTCTTGAGAGAAAGAGTGCAAGTGGAACAA 416 |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct 364 TGCAAAGCCCTGAATGGACGACTCTTAAATTTCTTGAGAGAAAAAGTGCAAGTGGAACAA 423 Query 417 CTTATTAGGTACATAATAGAGGAGCCTCTTGAGGATGTGGAAAAGAAGCGAACATTCAAG 476 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 424 CTTATTAGGTACATAATAGAGGAGCCTCTTGAGGACGTGGAAAAGAAGCGAACATTCAAG 483 Query 477 TTTCCTTTCATTGCCTGTGAAATTTTCACATGTGAGATTGAAATGATACTGAAAACACTA 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 484 TTTCCTTTCATTGCCTGTGAAATTTTCACATGTGAGATTGAAATGATACTGAAAACACTA 543 Query 537 GTAGAGGATGAGGAGTTGATGCTAGTGCTGTTTTCGTTCTTAGAAGCTAAAGAAACCCAT 596 ||||| ||||||||||||||| || | |||||||||| || |||||||||||||||||| Sbjct 544 GTAGAAGATGAGGAGTTGATGTTATTATTGTTTTCGTTTTTGGAAGCTAAAGAAACCCAT 603 Query 597 AACTCATTGCTTGCCGGGTACTTCAGTAAGGTTGTCATTTGTCTGCTGGTGCGGAAGACG 656 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 604 AACTCATTACTTGCCGGGTACTTCAGCAAGGTTGTCATTTGTCTGCTGGTGCGGAAGACG 663 Query 657 ATCCCTTTCATGCAATTTATAAAAGATCATCAAGAAATACTGAAGCAGCTTGTTGATTTG 716 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 664 ATCCCATTCATGCAATTTATAAAAGATCATCAAGAAATTCTGAAGCAGCTTGTTGATTTG 723 Query 717 ATTGGTATTACATCTATAATGGAGGTTTTAAAACGTCTGGTTGGTACTGATGAGCACCTA 776 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||| Sbjct 724 ATTGGTATTACATCTATTATGGAGGTTTTAAAACGCCTGGTTGGTACTGATGAACACCTA 783 Query 777 TATTCAAACTACACAAGTGCAATGCAGTGGGTAGAGGATACAGATGTGTTAGAGATGATT 836 ||||||||||| |||||||||||||||||| |||| ||||| ||||| |||||||||||| Sbjct 784 TATTCAAACTATACAAGTGCAATGCAGTGGATAGAAGATACGGATGTTTTAGAGATGATT 843 Query 837 GTGGACAAGTTTGGCTCCTCGGATTCTCCCGAGGTACATGCCAATGCAGCTGAAATTCTT 896 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 844 GTGGACAAGTTTGGCTCTTCGGAGTCTCCCGAGGTACATGCCAATGCAGCTGAAATTCTG 903 Query 897 TGTACTGTAGCAAGATACGCACCCCCTGGTCTTGCTACAAAACTTTCCAGCCCCAGTTGT 956 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 904 TGTACTGTTGCAAGATACGCACCCCCTGGTCTTGCTACAAAACTTTCCAGCCCCAGCTGC 963 Query 957 ACTGGAAGGTTGTTAAAACATACTTTAGAAGATTCACGGCCTAAGTCTGTTCTGGTTAAT 1016 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 964 ACTGGAAGGTTGTTAAAACATACTTTAGAAGATTCACGGCCTAAGTCTGTTCTGGTTAAT 1023 Query 1017 TCATTATCTGTATGCATATCTCTGCTGGATCCTAAGAGGTTTACATTGGGGACTTATCAT 1076 || |||||||||||||||||||| || |||||||||||||||||| |||| ||||||||| Sbjct 1024 TCGTTATCTGTATGCATATCTCTACTCGATCCTAAGAGGTTTACACTGGGCACTTATCAT 1083 Query 1077 ATATATGGCCGTCAA-TTAACCCATGGAAGCATGGTAACTAATCCTGAGACAGTGGAGGG 1135 |||||||| |||||| || |||||||||||||||||||||||||| |||||||| ||||| Sbjct 1084 ATATATGGTCGTCAACTT-ACCCATGGAAGCATGGTAACTAATCCCGAGACAGTTGAGGG 1142 Query 1136 AATGCTTGGAAGCCTAGGTGATTTACTTATGCTTTTGAATGTTTCATCTGCTGAGGATGT 1195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1143 AATGCTTGGAAGCCTAGGTGATTTACTTATGCTTTTGAATGTTTCATCTGCTGAGGGTGT 1202 Query 1196 TTTGTTGACAACGTATGGCAAGTTGCAACCACCTCTTGGAAAACACAGATTAAAGATTGT 1255 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1203 TTTGTTAACAACGTATGGCAAGTTGCAACCACCTCTTGGAAAACACAGATTAAAGATTGT 1262 Query 1256 AGAGTTTATTTCAGTCTTACTCACTGTCGGAAGTGAAGCAGCAGAGAAGGAAGTAATTCG 1315 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 1263 AGAGTTTATTTCAGTCTTGCTCACTGTCGGTAGTGAAGCAGCAGAGAAGGAAGTAATTCG 1322 Query 1316 ACTTGGAGCGGTGAAAAGAGTGTTGGACTTGTTCTTCGAGTATCCCTACAACAATTTTTT 1375 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1323 ACTTGGAGCGGTGAAAAGAGTGTTGGACTTGTTCTTTGAGTATCCCTACAACAATTTTTT 1382 Query 1376 GCATCACCATGTGGAGAATGTAATTCTCTCATGTTTGGAGAGCAAAAACTCTCAACTTGT 1435 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1383 GCATCACCATGTGGAGAATGTAATTCTCTCATGTATGGAGAGCAAAAACTCTCAACTTGT 1442 Query 1436 TGACCATCTTTTCAGTGAGTGCAATCTTATTGGGAGTATACTAGAGGCGGAAAAAGACTC 1495 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1443 TGACCATCTTCTCAGTGAGTGCAATCTTATTGGGAGTATACTAGAGGCGGAAAAGGACTC 1502 Query 1496 CACATTAACTGCTAGTGATTCTAATAAGCTTCAGCCGACAGTCCCTGCAGAGGGTAGAAA 1555 ||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||| ||| Sbjct 1503 CACATTAACTGCTGGTGATTCTGATAAGCTTCAGCCTACAGTCCCTGCAGAGGGTAAAAA 1562 Query 1556 GCCACTCAGGATTGGAAACATTGGTCATATGACTCGTATCTCGAACAAACTTCTTCAGCT 1615 ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct 1563 GCCACTCAGGATTGGAAACATCGGTCATTTGACTCGTATCTCCAACAAACTTCTTCAGCT 1622 Query 1616 AGCTAATAGCAATGTCGAAATTCAGTCACATTTGCAGGAAAATAGCAAATGGGTGGACTG 1675 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1623 AGCTAATAGCAATGTCGAAATTCAGTCACATTTGCAGGAAAATAGCAAATGGGTGGACTG 1682 Query 1676 GCAGACAGATGTATTGTCAAAGCGTAATACATTGGAAAATGTCTACTCTTGGGCCTGCGG 1735 |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1683 GCAGACAGATGTCTTGTCGAAGCGTAATACATTGGAAAATGTCTACTCTTGGGCCTGCGG 1742 Query 1736 GAGGCCAACTTCACTCCATGATCGTAGTAGAGATAGTGATGATGATGATTACCACGATAG 1795 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1743 GAGGCCTACTTCACTCCATGATCGTAGTAGAGATAGTGATGATGATGATTACCACGATAG 1802 Query 1796 AGATTATGATGTGGCAGCCCTAGCAAACAATTTGAGCCAGGCCTTTCGGTATGGAATTTA 1855 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 1803 AGATTATGATGTGGCAGCCCTAGCAAACAATTTGAGCCAGGCTTTTCGATATGGAATTTA 1862 Query 1856 CAGCAATGATGACATGGATGAGGCCCAAGGCTCTATGGAACGTGATGATGAGGATGTCTA 1915 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1863 CAGCAATGATGACATGGATGAGGCCCAAGGCTCTATGGAACGCGATGATGAGGATGTCTA 1922 Query 1916 CTTTGATGATGAATCTGCAGAAGTCGTCATATCTTCCTTGCGCCTTGGAGATGATCAGGA 1975 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 1923 CTTTGATGATGAATCTGCAGAAGTCGTCATATCCTCCTTGCGCCTTGGAGATGACCAGGA 1982 Query 1976 GAGCGATTCTCTCTTCACAAATTCAAACTGGTTTGCATTCGATGATGATAAAGCTGCAAA 2035 ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 1983 GAGTGATTCTCTCTTCACAAATTCAAACTGGTTCGCATTCGATGATGATAAAGCTGCGAA 2042 Query 2036 TGAGCGCTCAATGAGCTCAGCTACTTCCCCTTCACCCAATGCTGATGGAGATGGTGACGA 2095 |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || Sbjct 2043 TGAGCGCTCAATGACCTCAGCTGCTTCCCCTTCACCCAATGCTGATGGAGATGGTGAAGA 2102 Query 2096 TGATGATG-T--CGTCATAGGCGAAGCCGATGAATTCAACGACACTGCAGCTTCTTCCCC 2152 |||||||| | ||||||||||||||||||||||||||||| ||||||||| ||||| || Sbjct 2103 TGATGATGATGTCGTCATAGGCGAAGCCGATGAATTCAACGCCACTGCAGCCTCTTCTCC 2162 Query 2153 ACCTGGTGATATGGAAACAGAAGATTCTACATCAAAGCATCCTTCTGAAAATCCGAGTGA 2212 ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 2163 ACCTGTTGATATGGAAACAGAGGATTCTACATCAAAGCATCCTTCTGAAAACCCGAGTGA 2222 Query 2213 ACCAGAACCTGAAAAATCACCTGCTTGGGTTGAGTGGAGAGAGACCTCTGAGTCCACTGC 2272 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 2223 ACCAGAACCTGAAAAGTCACCTGCTTGGGTTGAGTGGAGAGAGACCTCTGAGTCCACCGC 2282 Query 2273 ACC---TTCTTCCAACCCAGATGAAACTACCATATTGTCCAATGGTGATGTTCAAATTGA 2329 ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 2283 ACCACCTTCTTCCAACCCAGAGGAGACTACCATATTGTCCAATGGTGATGTTCAAATTGA 2342 Query 2330 GAAAGAGGATAATGATGATGATGAT-AC-C-GATAACAAAAGTGCAGTGAAAACACCAGG 2386 ||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| Sbjct 2343 GAAAGAGGATAATGATGATGATGATGATACTGATAACAAAAGTGCAGTGAAAACACCAGG 2402 Query 2387 TGTATCTGGCGATGAAACCACAGAGAAGTTACCAGATGAGAGTGGTGTTGAACCCACTGA 2446 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2403 TGTACCTGGCGATGAAACCACAGAGAAGTTACCAGATGAGAGTGGTGTTGAACCCACTGA 2462 Query 2447 GAGCTCATCAAAAGCGAGTGGCATTGAACCCACTGAGATCTCACCCAAAGCTAGTGG 2503 || |||| ||||||| ||||||||||||||||| |||| |||||| ||||| ||||| Sbjct 2463 GAACTCACCAAAAGCTAGTGGCATTGAACCCACAGAGAGCTCACCAAAAGCGAGTGG 2519 Score = 760 bits (411), Expect = 0.0 Identities = 471/499 (94%), Gaps = 7/499 (1%) Strand=Plus/Plus Query 2462 GAGTGGCATTGAACCCACTGAGATCTCACCCAAAGCTAGTGGCATTGAACCCACGGAGAC 2521 |||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||| Sbjct 2442 GAGTGGTGTTGAACCCACTGAGAACTCACCAAAAGCTAGTGGCATTGAACCCACAGAGAG 2501 Query 2522 CTCACCTAAAGCTAGTGGAGCTGAAGTAACT-GAGAACTTGAGAGATTACGATCCTGCTG 2580 |||||| ||||| |||||||||||||||||| || ||||||||||||| ||||||||||| Sbjct 2502 CTCACCAAAAGCGAGTGGAGCTGAAGTAACTGGA-AACTTGAGAGATTCCGATCCTGCTG 2560 Query 2581 AATCGCATGCAGATGCGAAAAGCTCTGAACCTGAAAGCCCCCATGAGACAAAAGAAACAG 2640 |||| ||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||| Sbjct 2561 AATCTCATGCGGATGCTAAAAGCTCTGAACCTGAAAGCCCTCATGGGACAAAAGAAACAG 2620 Query 2641 AGGTTGCAGCAGAAGCAGATACCAAAGAGAAAGAAGAAGCTGTGAAGGAACCAGAGAAGG 2700 |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 2621 AGGTTGCAGCAGAAGCAGATACCAAAGAGACCGAAGAGGCTGTGAAGGAACCAGAGAAGG 2680 Query 2701 TAGTGTGAGCTTTTTACTTAACCGGGGGTCTCTTTGACTGATAAAACAAAATTTCTTCTG 2760 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2681 TAGTGTGAGCTTTTTACTTAACCGGGGGTCTCTTTGACTGATAAAACAAAATTTCTTCTG 2740 Query 2761 GTTTAGTTTGATTAAGGGCTTTGTCTGTTTTGGGTACAATTTATTATTCt-tttttt-CT 2818 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct 2741 GTTTAGTTTGATTAAGGGCTTTGTCTGTTTTGGGTACAATTTATTATTCTATTTTTTTCT 2800 Query 2819 TTTCCTTGTTTGTTTACTTCATTGTATCATCTCCAAATCCGGTATTTTTTATTCAACATT 2878 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2801 TTTCCTTGTTTGTTTACTTCATTGTATCATCTCCAAATCCGGTATTTTTTATTCAACATT 2860 Query 2879 ATTGTCGTCCAAAAT--GTTAGTAGCTTTTCATATCT-ATCAGTATAATCTTTTACCTCA 2935 ||||||| ||||||| |||| ||||||||||||| | || ||||||||||||||||||| Sbjct 2861 ATTGTCGACCAAAATTTGTTACTAGCTTTTCATATTTTATTAGTATAATCTTTTACCTCA 2920 Query 2936 GCTAGACTCATCAAGTGTC 2954 ||||||||||||||||||| Sbjct 2921 GCTAGACTCATCAAGTGTC 2939 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 146838642161 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5