BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473380 Length=1948 Score E Sequences producing significant alignments: (Bits) Value AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 3014 0.0 > AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:11461855-11463848 REVERSE LENGTH=1994 Length=1994 Score = 3014 bits (1632), Expect = 0.0 Identities = 1803/1886 (96%), Gaps = 10/1886 (1%) Strand=Plus/Plus Query 67 ACATTTTCGGACACC-AAATCCCTAGTTTCTTAATGGTTACGAGGAGAGGATGATCAAGG 125 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 115 ACATTTTCGGACACCAAAATCCCTAGTTTCTTAATGGTTATGAGGAGAGGATGATCAAGG 174 Query 126 CACCAACAATTCTACAGTCTCTATTGGCTTCTAGAGACGATTTAACACATAACCCAGAAG 185 || | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 175 CA-C--CAATTCTACAGTCTCTATTGGCTTCTAGAGACGATTTAACTCATAACCCAGAAG 231 Query 186 TCAACAACTGTGGAGGGAAAGAGCAAGAATGTTTATACCTCTTGAAGAGATGCAACAACA 245 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 232 TCAACAACTTTGGAGGGAAAGAGCAAGAATGTTTATACCTCTTGAAGAGATGCCACAACA 291 Query 246 TTGACGAGTTCAAGCAAGTTCACGCCAGATTCATCAAGCTAAGTTTGTTCTGCTCTTCTT 305 | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 292 TAGACGAGTTCAAGCAAGTTCACGCCAGATTCATCAAGCTAAGTTTGTTCTATTCTTCTT 351 Query 306 CATTCTCAGCTAGCAGCGTTCTCGCAAAATGCACTCACTCGAGG-TGGGAGAACAGTATG 364 |||||||||| ||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct 352 CATTCTCAGCCAGCAGCGTTCTCGCAAAATGCGCTCACTCG-GGATGGGAGAACAGTATG 410 Query 365 AATTACGCAGCTTCGATATTCAGAGGCATTGATGATCCGTGTACCTTTGATTTCAATACA 424 |||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 411 AATTACGCAGCTTCCATATTCAGAGGCATAGATGATCCTTGTACCTTTGATTTCAATACA 470 Query 425 ATGATTAGAGGGTATGTTAATGAAATGAGTTTCGAGGTAGCATTGTGTTTTTACAATGAG 484 |||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||| Sbjct 471 ATGATTAGAGGGTATGTTAACGTAATGAGTTTCGAGGAAGCATTGTGTTTTTACAATGAG 530 Query 485 ATGATGGAGAGAGGGATTGAGTCAGATAATTTCACGTACCCGTGTCTTCTCAAGGCTTGC 544 |||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct 531 ATGATGCAGAGAGGGAATGAGCCAGATAATTTCACGTACCCGTGTCTTCTCAAGGCTTGC 590 Query 545 ACTCGTTTGAAGGCGATTCGAGAAGGGAAGCAGATTCATGGGCACGTGTTTAAGCTCGGT 604 |||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 591 ACTCGTTTGAAGTCAATTCGAGAAGGGAAGCAGATTCATGGGCAAGTGTTTAAGCTCGGT 650 Query 605 CTTGAAGCGGATGTGTTTGTTCAGAATAGTTTGATCAATATGTATGGAAGATGTGGAGAG 664 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 651 CTTGAAGCTGACGTGTTTGTTCAGAATAGTTTGATCAATATGTATGGAAGATGTGGAGAG 710 Query 665 ATGGAACTTTCTTCTACAGTTTTTGAGAAACTGGAATTTAAATCTGCTGCGTCGTGGAGC 724 ||||||||||||||| | ||||||||||||||||||| |||| | ||||||||||||||| Sbjct 711 ATGGAACTTTCTTCTGCGGTTTTTGAGAAACTGGAATCTAAAACAGCTGCGTCGTGGAGC 770 Query 725 TCAATGGTTTCAGCTTGTGTAGGCATGGGATTGTGGAGCGAATGCTTGATGTTATTTCGT 784 || ||||| || ||| ||| |||||||||| ||||||||||||||||| | |||| ||| Sbjct 771 TCGATGGTCTCTGCTCGTGCAGGCATGGGAATGTGGAGCGAATGCTTGTTACTATTCCGT 830 Query 785 GAAATGTGTAGAGAAACGAATTTGAAGGCTGAGGAAAGCGGAATGGTTAGTGCTCTCTCA 844 | ||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||| | Sbjct 831 GGAATGTGTAGCGAAACGAATTTGAAGGCGGAAGAAAGTGGAATGGTTAGTGCTCTCTTA 890 Query 845 GCTTGTGCCAACACAGGTGCACTCAATCTAGGAATGAGCATCCATGGCTTCCTGTTGAGA 904 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 891 GCTTGTGCCAACACCGGTGCACTCAATCTAGGAATGAGCATCCATGGCTTCCTGTTGAGA 950 Query 905 AACATAAGCGAACTCAACATAATAGTCCAAACTTCACTTGTAGATATGTACGTTAAATGC 964 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 951 AACATAAGCGAACTCAACATAATAGTCCAAACTTCACTAGTAGATATGTACGTTAAATGC 1010 Query 965 GGGTG-TATAGACAAAGCGTTGCATATATTTCAGAAGATGGAAAAGAGGAATAATTTGAC 1023 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1011 GGGTGCT-TAGACAAAGCGTTGCATATATTTCAGAAGATGGAAAAGAGGAATAATTTGAC 1069 Query 1024 TTACAGTGCAATGATCTCAGGACTTGCGTTGCACGGAGAAGGAGAATCAGCTTTAAGAAT 1083 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1070 TTACAGTGCAATGATCTCAGGACTTGCGTTGCACGGAGAAGGAGAATCAGCTTTAAGAAT 1129 Query 1084 GTTCTCTGAGATGATCAAAGAAGGCTTAGAACCAGATCATGTTGTGTATGTCAGTGTTCT 1143 ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1130 GTTCTCTAAGATGATCAAAGAAGGTTTAGAACCAGATCATGTTGTGTATGTCAGTGTTCT 1189 Query 1144 CAATGCCTGTAGCCACTCTGGTCTTGTTAAAGAAGGTCGTCGAGTCTTCGAAGAAATGTT 1203 |||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1190 CAATGCATGTAGTCACTCTGGTCTTGTTAAAGAAGGTCGTCGAGTCTTCGCAGAAATGTT 1249 Query 1204 AAAGGAAGGTAAGGTGGAGCCAACGGCTGAGCATTATGGCTGTCTTGTAGATCTTCTGGG 1263 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1250 AAAGGAAGGTAAGGTGGAGCCAACGGCTGAGCATTACGGCTGTCTTGTAGATCTTCTGGG 1309 Query 1264 AAGAGCCGGATTGCTCGAGGAAGCATTGGAGACTATCCAAAGCATGTCC-ATTGAGCAAA 1322 ||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||| Sbjct 1310 AAGAGCCGGATTGCTCGAGGAAGCATTGGAGACTATCCAAAGCAT-ACCAATTGAGAAAA 1368 Query 1323 ATGATGTTGTCTGGAGAAGCTTCTTAAGCCAATGCAGAGTTCATCAGAACATTGAGCTAG 1382 |||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||| Sbjct 1369 ATGATGTTATCTGGAGAACCTTCTTAAGTCAATGCAGAGTTCGTCAGAACATTGAGCTAG 1428 Query 1383 GTCAAATAGCAGCTCAAGAACTGCTTAAGCTAAGCTCACACAACCCAGGTGACTATTTGC 1442 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1429 GCCAAATAGCAGCTCAAGAACTGCTTAAGCTAAGCTCACACAACCCAGGTGACTATTTGC 1488 Query 1443 TAATCTCTAACATGTATTCACAAGCTCAAATGTGGGATGATGTAGCCAGAGCTCGAACAG 1502 | ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 1489 TGATCTCTAACTTGTATTCACAAGGTCAAATGTGGGATGATGTAGCCAGAACTCGAACAG 1548 Query 1503 AAATCGCTATCAAGGGTTTGAAGCAAACCCCGGGTTTTAGTATTGTCGAGGTAAAAGGTA 1562 |||||||||||||||||||||| ||||||||||||||||| || |||||| ||||||||| Sbjct 1549 AAATCGCTATCAAGGGTTTGAAACAAACCCCGGGTTTTAGCATCGTCGAGCTAAAAGGTA 1608 Query 1563 AAACCCACAGGTTTGTTTCACAAGATCGATCGCACCCACAATGCAAAGAAATCTACAAGA 1622 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1609 AAACCCACAGGTTCGTTTCACAAGATCGATCGCACCCAAAATGCAAAGAAATCTACAAGA 1668 Query 1623 TGCTACACCAGATGGAATGGCAACTAAAGTTCGAAGGATATTCACCAGACTTGACACAGA 1682 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1669 TGCTACACCAGATGGAATGGCAACTAAAATTCGAAGGATATTCACCAGACTTGACACAGA 1728 Query 1683 TATTGCTAAACGTAGATGAAGAAGAAAAGAAAGAGAGACTAAAAGGACACAGCCAAAAGG 1742 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1729 TATTGCTAAACGTAGATGAAGAAGAAAAGAAAGAGAGATTAAAAGGACACAGCCAAAAGG 1788 Query 1743 TGGCTATTGCCTTTGCACTATTGTATACACCTCCAGGGTCTATCATTAAAATAGCTAGAA 1802 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1789 TGGCTATTGCCTTTGGACTATTGTATACACCTCCAGGGTCTATCATTAAAATAGCTAGAA 1848 Query 1803 ACCTGAGGATGTGTAGTGACTGTCACACATATACAAAGAAAATCTCCATGATCTACGAAA 1862 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1849 ACCTGAGGATGTGTAGTGACTGTCACACATATACAAAGAAAATCTCCATGATCTACGAAA 1908 Query 1863 GAGAGATTGTTGTAAGAGACAGAAATAGGTTTCACCTGTTTAAAGGTGGAACTTGTTCTT 1922 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1909 GAGAGATTGTTGTAAGAGACAGAAACAGGTTTCACCTGTTTAAAGGTGGAACTTGTTCTT 1968 Query 1923 GTAAAGATTATTGGTAGGTTTAAATC 1948 |||||||||||||||||||||||||| Sbjct 1969 GTAAAGATTATTGGTAGGTTTAAATC 1994 Score = 93.5 bits (50), Expect = 7e-18 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 1 ACTTGTGGCTCTTATTTTCCATGAAAATCTCGAGGGATGAGATTCAAAACCCCTCA 56 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 11 ACTTGTGGCTCATATTTTCCATGAAAATCTCGAGGGATGAGATTCAAAAACCCTCA 66 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 96485447490 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5