BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473442 Length=1779 Score E Sequences producing significant alignments: (Bits) Value AT1G32500.1 | Symbols: ATNAP6, NAP6 | non-intrinsic ABC protein... 2708 0.0 > AT1G32500.1 | Symbols: ATNAP6, NAP6 | non-intrinsic ABC protein 6 | chr1:11749823-11752106 REVERSE LENGTH=1808 Length=1808 Score = 2708 bits (1466), Expect = 0.0 Identities = 1686/1790 (94%), Gaps = 23/1790 (1%) Strand=Plus/Plus Query 1 aaaaaaaaaaaaCTCTATTGGAGAAAGTACTTGTCGG-ATCGCTGCGAAAAGCAAagaga 59 |||||||| | |||||||| |||||||||||||| || ||||| |||||||||||||||| Sbjct 31 AAAAAAAACACACTCTATTTGAGAAAGTACTTGTGGGAATCGCGGCGAAAAGCAAAGAGA 90 Query 60 gagag-agagaAGGAATCCATTAATGGCGGCTGCCACAGTTCTCGGTCGCTTATCACTGA 118 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 91 GAGAGAAG-GAAGGAATCCATTAATGGCGGCTGCCACAGTTCTCGGTCGCTTATCACTGA 149 Query 119 TACCAACTCTATCTTCTAAACCAAAGTTGAAATCAAACAGAAGAACAACTTCTACAAGTG 178 |||||| |||||| ||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct 150 TACCAAATCTATCATCTAAACCAAAATTGAAATCTAACAGAAGAACAACTTCCACAAGTG 209 Query 179 TTTCTATACGAGCACAAGCTTCGTTCTCTGACCCTTTTGTACTTCAATTAGCTGAATCTC 238 ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210 TTTCTGTTCGTGCACAAGCTTCGTTCTCTGACCCTTTTGTACTTCAATTAGCTGAATCTC 269 Query 239 TCGAAGATTCTCTGTCAGCTTCTCCTTCTTCGTCTTCTTTACCTCTCCAAAGAATCCGTG 298 ||||||||||||| |||||||||||||| | |||||||||||||| ||||||||||||| Sbjct 270 TCGAAGATTCTCTCTCAGCTTCTCCTTC-T--TCTTCTTTACCTCTTCAAAGAATCCGTG 326 Query 299 ATTCTTCCGCTGAGACTCTTTTATCTACACCATGGCCGTCACGAAAAGACGAGCCTTTCC 358 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 327 ATTCTTCCGCTGAGACTCTTTTATCTACGCCATGGCCGTCACGAAAAGACGAACCTTTCC 386 Query 359 GATTCACCGATACATCTTTCATCCGATTTTCTCAAATCGAACCCGTTTCGACCCATCAAC 418 ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||| Sbjct 387 GATTCACCGATACATCTTTAATCCGATCTTCTCAAATCGAACCAATTTCGACCCAGCAAC 446 Query 419 GAAATTCTGAAATTTTGGATAATCTGACGGAAACCCAGTTCCCAAACGCTGTGATTATTG 478 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 447 GAAATTCGGAAATTTTGGATAATCTGACGGAAACCCAGTTCACAAACGCTGTGATTATTG 506 Query 479 ATGGGTTCGTGTCGAGTTTGACGATTGGTCCATCGGATTTGCCTGATGGGGTTTACTTCG 538 ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct 507 ATGGGTTCGTGTCGAATTTGACGATTGGTCCATCGGATTTGCCCGATGGGGTTTACTTCG 566 Query 539 GGAGCT-TCTCTGGTTTACCGGATGAGTTAACGAACCGGGTTTCTGAGTTCATAGGGAAT 597 ||| | | |||||||||||||||||||||||||||||| |||||||||| || |||||| Sbjct 567 GGAAATAT-TCTGGTTTACCGGATGAGTTAACGAACCGGATTTCTGAGTTTATCGGGAAT 625 Query 598 TTCGATTCTGGTGATTTGTTTTGGTCGATTAATGGTATGGGAGCACCGGATTTGGTGGTG 657 || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 626 TTTGATTCTGGTGATTTGTTTTGGTCGATTAATGGTATGGGAGCACCGGATTTGATGGTG 685 Query 658 ATTTATGTTCCTGAAGGGTGTAAGGTGGAGAATCCAATCTATTTGAGGTACTTTTGTGGT 717 ||||||||||||||||| |||||||| |||||||| || |||||||||||||||| |||| Sbjct 686 ATTTATGTTCCTGAAGGATGTAAGGTCGAGAATCCGATTTATTTGAGGTACTTTTCTGGT 745 Query 718 GAAACTGGTGACCGGGAATCGAAACGGTTACCGGTATCGAATCCTAGGGTTTTTGTGTTA 777 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 746 GAAACTGGTGACCGGGAATCGAAACGGTTACCGGTATCGAATCCTAGGGTTTTTGTGTTA 805 Query 778 GTGGAGGAAGGAGGAGAGATTGGTATAGTTGAGGAATTTGTTGGTAAAGATGAAGAAGGG 837 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 806 GTGGAGGAAGGAGGAGAGATTGGTATCGTTGAGGAATTTGTTGGTAAAGATGAAGAAGGG 865 Query 838 TTTTATTGGACGAATCCGGTTTTGGAAGTTGTTGTTCAAAAGAATGGGAAATTGAAGCAT 897 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 866 TTTTATTGGACGAATCCTGTTTTGGAAGTTGTTGTTCAAAAGAATGCGAAATTGAAGCAT 925 Query 898 TCATATTTGCAGAAAGAGTCCATGGCTTCTGCTCATGTCAAGTGGACTTTCGTCCGACAG 957 || |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||| Sbjct 926 TCTTATTTGCAGAAAGAATCCATGGCTTCTGCTCATATCAAGTGGACTTTTGTCCGACAG 985 Query 958 GAGGCAGAGAGTGAATATGAGCTTGTGGAAGTGAGTACTGGTGGGAAA-TTGGGGAGGCA 1016 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 986 GAGGCAGAGAGTGAATATGAGCTTGTGGAAGTGAGTACTGGTGGGAAACTTGGG-AGGCA 1044 Query 1017 CAATGTTCATGTGCAGCAGCTTGGGCCTGATACGCTCACTGAGTTAACCACGTTTCATAT 1076 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 1045 CAATGTTCATGTGCAGCAGCTTGGGCCTGATACGCTCACAGAGCTAACCACGTTTCATAT 1104 Query 1077 GTGTGTCAACGAGCAGACTCTTGATCTCCATAGCAGAATTGTCTTAGACCATCCACGAGG 1136 ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 1105 GTGTGTCAACGAGCAGACTCTTGATCTCCATAGCAAAATTATCTTAGACCATCCACGAGG 1164 Query 1137 CTCTTCGCGACAGCTTCACAAGTGTATTGTTGCTCATTCCTCTGGTCAAGCTGTTTTCGA 1196 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1165 CGCTTCACGACAGCTTCACAAGTGTATTGTTGCTCATTCCTCTGGTCAAGCTGTTTTCGA 1224 Query 1197 TGGCAATGTCCGAGTTAACAGATTAGCTCAACAGACCAATGCGGGGCAACTAACACGGAG 1256 |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct 1225 TGGCAATGTCCGAGTTAACAGATTCGCTCAACAGACCAACGCGGGACAACTAACACGGAG 1284 Query 1257 CCTCCTTCTGAAACCCCGAGCCACCGTGAACATAAAACCGAATCTTCAGATCATTGCAGA 1316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1285 CCTCCTTCTGAAACCCCGAGCCACCGTGAACATAAAACCGAATCTTCAGATCATTGCAGA 1344 Query 1317 CGATGTCAAATGCTCGCATGGAGCTGCTATCAGTGATCTCGAAGAAGACCAGCTCTTCTA 1376 |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1345 TGATGTCAAATGCTCTCATGGAGCTGCTATCAGTGATCTTGAAGAAGACCAGCTCTTCTA 1404 Query 1377 TTTCCAAGCTCGTGGGATCGACTTGGAGACTGCAAGAAGAGCTCTCATATCTTCTTTTGG 1436 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1405 TTTCCAAGCTCGTGGGATCGACTTGGAGACTGCAAGAAGAGCTCTCATATCGTCTTTTGG 1464 Query 1437 ATCAGAGGTTATCGAGAAGTTTCCAAATCGGGAAATCCGAGACCAAGCCAGGAATCATGT 1496 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 1465 ATCAGAGGTTATCGAGAAGTTTCCAAATCGGGAAATCAGAGACCAAGCCAGGAATCACGT 1524 Query 1497 CAAAGGCTTGCTCTGATGA-TTATCCCAAAGAGAAC-G--CGTGGTGCTCACGTGCCGGT 1552 |||||||||||||||||| || || || || ||| | |||| | |||||| |||||| Sbjct 1525 CAAAGGCTTGCTCTGATGTGTT-TCACA--GA-AACCGATCGTGATACTCACGCGCCGGT 1580 Query 1553 ATTGCACTTACGATTCATCAATTTATCCTCTGTTCATTACTGTTTAA-GGCTTGCGAGGC 1611 |||| |||||||||| |||||| ||||| |||||||||||| | || |||||| ||||| Sbjct 1581 TTTGCGCTTACGATTCGTCAATT-ATCCTTTGTTCATTACTGCTCAAAGGCTTGGGAGGC 1639 Query 1612 CCATCTAGTCCAGTTTGGCCCATATAATTAAAAT-TAAGAAGAACAACAAACAGTTGGCT 1670 |||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct 1640 CCATATAGTCCAGTTTGGCCCATTTAATTAAAAACTAAGAAGAACAACAAACAGTTGGCT 1699 Query 1671 TCTATATGAGTTAAATAGCGTGCAGCT-CTATTTTAAATTTGGGAAAAGGTTTCTATTGG 1729 ||||||||||||||||||||||||| | || ||| ||||||||||||||||||||||| | Sbjct 1700 TCTATATGAGTTAAATAGCGTGCAGTTTCTCTTT-AAATTTGGGAAAAGGTTTCTATTCG 1758 Query 1730 CATCTGTATAAGTAAAACGACACGATTTTTATGGATTTAAGTGAAACTTG 1779 ||||||||||||||||||||| |||| ||||||||||||||| ||||||| Sbjct 1759 CATCTGTATAAGTAAAACGACGCGATGTTTATGGATTTAAGTAAAACTTG 1808 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 88001555385 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5