BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473564
Length=1931
Score E
Sequences producing significant alignments: (Bits) Value
AT1G34120.2 | Symbols: IP5PI, AT5P1, ATIP5PI | inositol polypho... 3018 0.0
> AT1G34120.2 | Symbols: IP5PI, AT5P1, ATIP5PI | inositol polyphosphate
5-phosphatase I | chr1:12426778-12429710 FORWARD LENGTH=2010
Length=2010
Score = 3018 bits (1634), Expect = 0.0
Identities = 1822/1914 (95%), Gaps = 7/1914 (0%)
Strand=Plus/Plus
Query 1 TCTTCCTCCTGCAACCTCTTCTT--CTCTCTCTGTTAGGTTTGACCGGAGTTTATGGCGG 58
||||||||||||||||||||||| ||||||| ||| | |||||||||||| ||||||||
Sbjct 1 TCTTCCTCCTGCAACCTCTTCTTCCCTCTCTCAGTTTGATTTGACCGGAGTATATGGCGG 60
Query 59 AAGTACGATCACGATCATCACGGCGAACCGAGAGCAATTGGGCTACAATATGTTGCTCAG 118
||||||||||||| ||||||| |||| ||||||||||||||||||||||| |||||||
Sbjct 61 AAGTACGATCACG---ATCACGGAGAACGGAGAGCAATTGGGCTACAATATGCTGCTCAG 117
Query 119 CTTTCTCATGTCTCCAGCTCTACTGGGCACGTCTTGTTCTCCGTAAATGGTTCAATGTTT 178
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 118 CTTTCTCGTGTCTCCAGCTCTACTGGGCACGTATTGTTCTCCGTAAATGGTTCAATGTTT 177
Query 179 CTGCCACTGAATCAGATTATAGCGCTGATAGTGACGATGACTACGAAGATAGAGCCCAAG 238
|||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||||
Sbjct 178 CTGCTTCTGAATCAGATTATAGTGCTGATAGTGACGATGACTACGAAGATAGATCACAAG 237
Query 239 AATTTGATCCAAGTAGCTCTGGAGTTACCAATCCTCGTGCTGATATTGACGGTAATGTGA 298
|||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 238 AATTTGATCCAATTAGCTCTGGAGTTACCAATCCTCGTGTTGATACTGACGGTAATGTGA 297
Query 299 TATATGGGCCTAAGCTTAGAAGACGAAATTCTGAAACTTTCAGGGTGCAGTATATGGATA 358
||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 298 TATATAGGCCTAAGCTTAGAAGACGAAATTCTGAAACTTTCAGGATGCAGTATATAGATA 357
Query 359 CCAAAGCAATCAGAATCTGTGCTGGGACATGGAATGTTGGAGGGAGAGTTCCTTCATCTG 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 CCAAAGCAATCAGAATCTGTGCTGGGACATGGAATGTTGGAGGGAGAGTTCCTTCATCTG 417
Query 419 ACTTGGATATTGATGGTTGGCTAGACACTGTTGAACCTGCTGACATTTATGTTCTTGGTC 478
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 418 ACTTGGATATTGATGGTTGGCTAGACACTCTTGAACCTGCTGACATTTATGTTCTTGGTC 477
Query 479 TTCAGGAAATTGTTCCCTTAAATGCTGGAAACATTTTTGGTATGGAGGATGACCAGCCTG 538
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 TTCAGGAAATCGTTCCCTTAAATGCTGGAAACATTTTTGGTATGGAGGATGACCAGCCTG 537
Query 539 CTTCT-GAATGGGAGAACTTGATACGAGATGCTTTAAACCAAGTTCGACCAAGAAAGCTG 597
||| | |||||||||||||||||||| ||||| ||||||| ||||| ||| |||||||||
Sbjct 538 CTT-TGGAATGGGAGAACTTGATACGTGATGCCTTAAACCGAGTTCAACCTAGAAAGCTG 596
Query 598 AAGATTGTAAGTCACAGTGATCCCCCTTCTCCATCAAAATTTAAGCAATCCGAAGAGGTT 657
|||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 597 AAGATTAAAAGTCACAGTGATCCCCCTTCTCCATCAAAGTTTAAGCAACCCGAAGAGGTT 656
Query 658 CCTTATAGTGTAGAAGATATGTTTGTTGAAACCAGTCATGATGCTTGCGATGCTATTAGT 717
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 657 CCTTATAGTGTAGAAGATATGTTTGTTGAAACCAGTCATGATGCTTGCGATGGAATTAGT 716
Query 718 TCAATGGATAACAAACTCAACTCTGTTGAAATCACAGACATACCAATCGTAAGCGAAGAT 777
||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||
Sbjct 717 TCAATGGATAACAAACTCAACTCTGTTGAAAGCACGGACGTACCAATCGTAAGCGAAGAT 776
Query 778 TCACTTACTAATATAGACGTTTTGGGTTCTGCCAATGACAATGCGTCTTGCTTGCCAATA 837
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 777 TCACTTACTAATATAGACGTTTTGGGTTCTACCAATGACAATGCGTCTTGCTTACCAATA 836
Query 838 CAAGAATATCTACAGAGGCAATTTTCATCACCAAATACGCCAGACCGCTCTCTTTCGATG 897
||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 837 CAAGAATATCTACAGAGACAATTTTCAACACCAAATACGCCAGACCGCTCTCTGTCGATG 896
Query 898 CAGATTAATAGTGATTCAAAAAGGGAAGAAAGATTTAGTTACACTAAAAGAGTAGGTTTG 957
||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||
Sbjct 897 CAGATTAATAGTGATTCCAAAAGGGAAGAAAGATTTAGTTACACTGAAAGGGTAGGTTTG 956
Query 958 AGCTGGCCAGAGCCTCCATTGAGGCTGCTAAATCAATATGTTTCCGAAAGACGTGGTTCC 1017
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 957 AGCTGGCCAGAGCCTCCATTAAGGCTCCTAAATCAATATGTTTCCGAAAGACGTGGTTCC 1016
Query 1018 TTCAAGTCAGTGAATCTGACTATCACGCATCTGAGAAAACCATCGTATGTAAGGATTGTG 1077
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 1017 TTCAAGTCAGTGAATCTGACTATCACGAATCTGAGAAAACCATCGTATGTTCGGATTGTG 1076
Query 1078 AGCAAACAGATGGTTGGAGTGTTTCTCACCATCTGGGTTCGGAGGAACTTGCGCAAGCAC 1137
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1077 AGCAAACAGATGGTTGGAGTGTTTCTCACCATTTGGGTTCGGAGGAACTTGCGCAAGCAC 1136
Query 1138 ATAAGCAACCTTTGTGTATCTACTGTTGGTGTTGGTATTATGGGCTACATTGGTAACAAG 1197
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 ATAAGCAACCTTTGTGTGTCTACTGTTGGTGTTGGTATTATGGGCTACATTGGTAACAAG 1196
Query 1198 GGATCTGTATCTGTGAGCATGTCAATCTATCAAACACCATTTTGTTTCTTGTGCTCGCAT 1257
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1197 GGGTCTGTATCTGTGAGCATGTCAATCTATCAAACACCATTTTGTTTCTTGTGCACGCAT 1256
Query 1258 CTGTCATCTGGGGAAAAGGATACAGATCAAGAGAAAAGAAACGATGATGTACGTGAAATT 1317
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 CTGTCATCTGGAGAAAAGGATACAGATCAAGAGAAAAGAAACGATGATGTACGTGAAATC 1316
Query 1318 CACAGAAGAACGCAGTTTCTTCCGCATTCTTTAAATGCCAACGGGATTCCAAGAAGCATC 1377
||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||||
Sbjct 1317 CACAGAAGAACGCAGTTTCTTCCTCATTCTTTAAATGCCAATGAGCTTCCAAGAAGCATC 1376
Query 1378 CGCGATCATGAAAGAATAATCTGGCTGGGAGATCTGAACTATCGGATTAACTTGTCGTAT 1437
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 TGTAATCATGAAAGAATAATCTGGCTGGGAGATCTGAACTATCGGATTAACTTGTCGTAT 1436
Query 1438 GAGAAGACACATGAACTTATTGCAAGAAAGGAATGGCAGAGGTTGGTAGAGTATGATCAG 1497
|||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||
Sbjct 1437 GAGAAGACACATGAACTTATTGCAAGAAAGGAATGGCAAAGGTTGGTAGAGTACGACCAG 1496
Query 1498 CTTTCAAGAGAAATGACAAAAGGGAACGTATTCGAGGGATGGTCAGAGGGAACTTTAGAT 1557
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1497 CTTTCAAGAGAAATGACAAAAGGGAACCTATTCGAGGGATGGTCAGAGGGAACTTTAGAT 1556
Query 1558 TTTCCACCAACATACAAATACGAAATCAATTCAGAAAACTACATCGGAGATGACCCGGAA 1617
||| |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 1557 TTTGCACCAACATATAAATACGAAATCGATTCAGAAAATTACATCGGAGATGACCCGGAA 1616
Query 1618 TCCGGGAAACGTAGACCAGCCTGGTGTGACCGCATCATTTGGAATGGAAAGGGAATGAAG 1677
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1617 TCCGGGAAACGTAGACCGGCCTGGTGTGACCGCATCATTTGGAACGGAAAGGGAATGAAG 1676
Query 1678 CTTTTTAATTACAGAAGAAACGAGATTAAACTATCGGATCACCGGCCTGTCACAGCCACG 1737
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1677 CTCTTCAATTACAGAAGAAACGAGATTAAACTATCGGATCACCGGCCTGTCACAGCCACG 1736
Query 1738 TTCTTGGCCAAGGTCGAGGTTTTGTCTCCACGGAAACTTCAGCATGCGCTTACACTCACA 1797
||||||||| |||| |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1737 TTCTTGGCCGAGGTTGAGGTTTTGTCTCCACGGAAACTTCAACATGCGCTTACACTTACA 1796
Query 1798 TATGCCGAGATTCAAGGCCTTGACGCCTAAATACCCTCTTCTGTCAGATCCCATTTGTGT 1857
||||| ||||||||||||||||||||||||| | || |||| ||||||||||||||||||
Sbjct 1797 TATGCTGAGATTCAAGGCCTTGACGCCTAAACAACCACTTCCGTCAGATCCCATTTGTGT 1856
Query 1858 ATAGTAATTTAACAATTTATATGCCCTTCATGTATAATAGTGTTCACGTACACA 1911
||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 1857 ATAGTAATTTAACGATTTGTATGCCCTTCATGTATAATAGTGTTCACGTACACA 1910
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95632038225
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5