BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473611
Length=2970
Score E
Sequences producing significant alignments: (Bits) Value
AT1G31230.1 | Symbols: AK-HSDH I, AK-HSDH | aspartate kinase-ho... 4846 0.0
AT4G19710.2 | Symbols: AK-HSDH II, AK-HSDH | aspartate kinase-h... 1459 0.0
> AT1G31230.1 | Symbols: AK-HSDH I, AK-HSDH | aspartate kinase-homoserine
dehydrogenase i | chr1:11158618-11163274 REVERSE
LENGTH=2988
Length=2988
Score = 4846 bits (2624), Expect = 0.0
Identities = 2869/2986 (96%), Gaps = 22/2986 (1%)
Strand=Plus/Plus
Query 1 AAAATTTACTGAAATTGCCACTGTTTTCGAGTTTGTTGGTTCTCCGATCTC-GCCGGTGT 59
|||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||
Sbjct 4 AAAATTTACTGAAATTGCCACTGTTTTCGATTTTGTTGGTTCTCCGATCTCAG-TGGTGT 62
Query 60 CTTCTTCTCCGGTGGAT-A--------TTGAAAACCTCCGGTAGTGTTTTACTGAGCTAC 110
||||||||||||| ||| | ||||||| |||||||||||||| |||||| |||
Sbjct 63 CTTCTTCTCCGGTAGATAATTCTCGTGTTGAAAATCTCCGGTAGTGTTTGACTGAGTTAC 122
Query 111 GAATATGCCGGTGGTTTCTCTGGCTAAGGTTGCTACTTTC-CCGGCGGTGGCTGGAGATT 169
|||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||
Sbjct 123 GAATATGCCGGTGGTTTCTCTGGCTAAGGTTGTTAC-TTCTCCGGCGGTGGCCGGAGATT 181
Query 170 TAACGGTTCGTGTTCCGTTCGTTTATGGGAAACGACTCGTGACGAATCGTGTTTCTTTCG 229
|| ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||
Sbjct 182 TAGCGGTTCGTGTTCCGTTCATTTATGGGAAACGACTAGTGTCGAATCGTGTTTCTTTCG 241
Query 230 GGAAATTGAGGCGCCGGAGTTGTATAGGTCATTGCGTAAGAAGCGAATTGCAGAGTCCTC 289
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 242 GGAAATTGAGGCGCCGGAGTTGTATAGGTCAATGCGTAAGAAGCGAATTGCAAAGTCCTC 301
Query 290 GTGTTC-TAGGTTCGGTCACAGATTTAGCGTTGGATAATTCTGTGGAGAATGGTCATCTT 348
||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 GTG-TCTTAGGTTCCGTCACAGATTTAGCGTTGGATAATTCTGTGGAGAATGGTCATCTT 360
Query 349 CCCAAAGGAGATTCATGGGCTGTACACAAATTTGGAGGAACTTGTGTGGGAAATTCTGAG 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 CCCAAAGGAGATTCATGGGCTGTACACAAATTTGGAGGAACTTGTGTGGGAAATTCTGAG 420
Query 409 AGGATAAAGGATGTTGCTGATGTTGTTGTTAAGGATGACTCTGAGAGCAAGTTGGTGGTT 468
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 421 AGGATAAAGGATGTTGCTGCTGTTGTTGTTAAGGATGACTCTGAGAGGAAGTTGGTGGTT 480
Query 469 GTGTCAGCAATGGCGAAAGTCACTGATATGATGTATGATCTTATTCACAGAGCACAGTCT 528
|||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 481 GTGTCAGCAATGTCGAAAGTCACTGATATGATGTATGATCTCATTCACAGAGCAGAGTCT 540
Query 529 CGGGATGATTCATATCTGTCTGCTTTGAGCGGTGTTCTTGAAAAGCACCGAGCAACGGCT 588
|| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 541 CGTGATGATTCATATCTGTCTGCTTTGAGTGGTGTTCTTGAAAAGCACCGAGCAACTGCT 600
Query 589 GTTGACTTGCTTGATGGAGATGAACTCGCGAGTTTCCTGGCTCGGTTAAATGATGATATA 648
||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||
Sbjct 601 GTTGACTTGCTTGATGGAGATGAACTCTCAAGTTTCTTGGCTCGGTTAAATGATGATATA 660
Query 649 AACAATCTCAAAGCAATGCTTCGTGCCATTTACATAGCTGGTCATGCAACCGAATCTTTC 708
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AATAATCTCAAAGCAATGCTTCGTGCCATTTACATAGCTGGTCATGCAACCGAATCTTTC 720
Query 709 TCAGACTTTGTTGTTGGCCACGGAGAGTTGTGGTCTGCTCAGATGTTAGCTGCTGTTGTG 768
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 TCAGACTTCGTTGTTGGCCACGGAGAGTTGTGGTCTGCTCAGATGTTAGCTGCTGTTGTG 780
Query 769 AGAAAGAGTGGATTGGACTGCACATGGATGGATGCAAGGGATGTGCTTGTTGTTAGTCCA 828
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 781 AGAAAGAGCGGATTGGACTGCACTTGGATGGATGCAAGGGATGTGCTTGTTGTTATTCCA 840
Query 829 ACAAGCTCTAATCAAGTCGACCCTGACTTTGTGGAATCAGAAAAGAGACTGGAAAAATGG 888
|| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 841 ACGAGCTCTAATCAAGTTGACCCTGACTTTGTGGAATCAGAAAAAAGACTGGAAAAATGG 900
Query 889 TTTACTCAGAACTCGGCAAAGATTATTATAGCAACTGGCTTCATAGCCAGTACACCACAG 948
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 901 TTTACTCAGAACTCGGCAAAGATTATTATAGCAACTGGTTTCATAGCCAGTACACCACAG 960
Query 949 AACATTCCAACGACTCTCAAGAGGGATGGGAGTGACTTCTCTGCAGCTATAATGGGTGCT 1008
||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||
Sbjct 961 AACATTCCAACGACTCTTAAAAGGGATGGGAGTGACTTCTCTGCAGCTATAATGAGTGCT 1020
Query 1009 CTGTTTAGATCTCACCAACTCACAATCTGGACAGATGTTGATGGTGTGTACAGTGCAGAT 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 CTGTTTAGATCTCACCAACTCACAATCTGGACAGATGTTGATGGTGTGTACAGTGCAGAT 1080
Query 1069 CCAAGGAAAGTTAGTGAAGCTGTTGTACTGAAGACTCTTTCTTACCAAGAGGCTTGGGAA 1128
|| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 1081 CCCAGGAAAGTTAGTGAAGCTGTTGTGCTGAAGACTCTTTCTTATCAAGAGGCTTGGGAA 1140
Query 1129 ATGTCTTACTTTGGGGCAAACGTTTTACATCCTCGGACCATTATTCCAGTGATGAAATAT 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 ATGTCTTACTTTGGGGCAAACGTTTTACATCCTCGGACCATTATTCCAGTGATGAAATAT 1200
Query 1189 GACATCCCAATTGTAATAAGGAATATTTTCAACCTCTCTGCCCCTGGAACAATGATATGT 1248
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 GACATTCCAATTGTAATAAGGAATATTTTCAACCTCTCTGCCCCTGGAACAATGATATGC 1260
Query 1249 CGGCAGATTGAAGATGAAGATGGATAT-AAATTAGACGCTCCTGTCAAAGGGTTTGCGAC 1307
||||||||||| ||||||||||||| | ||||||||||||||||| ||||| ||||||||
Sbjct 1261 CGGCAGATTGATGATGAAGATGGAT-TCAAATTAGACGCTCCTGTGAAAGGATTTGCGAC 1319
Query 1308 GATTGACAATTTGGCTCTTGTAAATGTGGAAGGAACTGGAATGGCTGGTGTTCCTGGTAC 1367
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1320 GATTGACAATTTGGCTCTTGTCAATGTAGAAGGAACTGGAATGGCTGGTGTTCCTGGTAC 1379
Query 1368 TGCCAGTGCCATTTTTTCTGCTGTCAAGGAAGTTGGAGCTAATGTTATTATGATCTCACA 1427
||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||
Sbjct 1380 TGCCAGTGCCATTTTTTCTGCTGTCAAGGAAGTTGGAGCCAATGTGATTATGATATCGCA 1439
Query 1428 GGCTAGTAGCGAGCATTCTGTGTGCTTTGCTGTACCAGAGAAGGAAGTGAAAGCTGTTTC 1487
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1440 GGCTAGTAGCGAGCATTCTGTGTGCTTTGCTGTACCTGAGAAGGAAGTGAAAGCTGTTTC 1499
Query 1488 TGAAGCATTGAACTCACGATTTCGTCAAGCTTTGGCTGGTGGCCGCCTTTCCCAGATTGA 1547
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 TGAAGCATTGAACTCAAGATTTCGTCAAGCTTTGGCTGGTGGCCGCCTTTCCCAGATTGA 1559
Query 1548 AATCATCCCTAATTGTAGCATATTAGCAGCAGTTGGCCAGAAAATGGCGAGCACTCCTGG 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 AATCATCCCTAATTGTAGCATATTAGCAGCAGTTGGCCAGAAAATGGCGAGCACTCCTGG 1619
Query 1608 TGTTTCTGCCACTTTTTTCAATGCGTTAGCAAAGGCCAATATCAACATCCGTGCTATAGC 1667
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1620 TGTTTCTGCCACTTTTTTTAATGCATTAGCAAAGGCCAATATCAACATCCGTGCTATAGC 1679
Query 1668 TCAAGGTTGCTCCGAGTTCAATATTACAGTAGTCGTCAAGCGTGAAGATTGCATTAGGGC 1727
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 1680 CCAAGGTTGCTCCGAGTTCAATATTACAGTAGTCGTCAAGCGTGAAGACTGCATCAGGGC 1739
Query 1728 ATTAAGAGCTGTGCACTCAAGATTTTACCTTTCGAGAACCACTTTGGCAGTGGGAATTAT 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1740 ATTAAGAGCTGTGCACTCAAGATTTTACCTTTCGAGAACCACTTTGGCAGTGGGAATCAT 1799
Query 1788 AGGACCGGGATTAATTGGTGGAACCTTACTTGATCAGATTAGAGATCAGGCGGCAGTGCT 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1800 AGGACCGGGATTAATTGGTGGAACCTTACTTGATCAGATTAGAGATCAGGCGGCAGTGCT 1859
Query 1848 CAAAGAAGAATATAAAATTGACTTGCGTGTTATAGGGATCACAGGCTCAAGTAAAATGTT 1907
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1860 CAAAGAAGAATTTAAAATTGACTTGCGTGTTATAGGGATCACGGGCTCAAGTAAAATGTT 1919
Query 1908 GATGAGTGAATCGGGGATTGACTTATCAAGATGGAGAAAACTTATGAAAGAAGAAGGAGA 1967
||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct 1920 GATGAGTGAATCGGGGATTGACTTATCAAGATGGAGAGAGCTTATGAAAGAAGAGGGAGA 1979
Query 1968 AAAAGCTAACATGGAGAAGTTCACCCAATATGTGAAGGGAAATCATTTCATTCCAAACTC 2027
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1980 AAAAGCTGACATGGAGAAGTTCACCCAATATGTGAAGGGAAATCATTTCATCCCAAACTC 2039
Query 2028 TGTTATGGTTGATTGTACGGCCGATGCTGATATCGCTAGCTGTTACTACGACTGGTTGCT 2087
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 2040 TGTTATGGTTGATTGTACAGCCGATGCTGACATCGCTAGCTGTTACTACGACTGGTTGCT 2099
Query 2088 ACGAGGAATTCATGTGGTCACTCCGAACAAAAAGGCCAACTCTGGACCACTTGATCAGTA 2147
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2100 ACGAGGAATTCATGTGGTCACTCCGAACAAAAAGGCTAACTCTGGACCACTTGATCAGTA 2159
Query 2148 TCTAAAGATCAGAGATCTTCAAAGAAAATCGTACACACATTACTTTTATGAAGCAACCGT 2207
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 2160 TCTAAAGATCAGAGATCTTCAACGAAAATCGTACACACATTACTTTTATGAAGCCACCGT 2219
Query 2208 TGGAGCTGGTCTTCCAATTATCAGCACCTTACGTGGTCTCCTCGAAACAGGGGATAAAAT 2267
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2220 TGGAGCTGGTCTTCCAATTATTAGCACCTTACGTGGTCTCCTCGAAACAGGGGATAAAAT 2279
Query 2268 ACTGCGAATTGAGGGAATTTTCAGTGGTACTTTAAGTTACCTCTTCAACAACTTTGTCGG 2327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2280 ACTGCGAATTGAGGGAATTTTCAGTGGTACTTTAAGTTACCTCTTCAACAACTTTGTCGG 2339
Query 2328 CACCAGAAGCTTCAGTGAAGTTGTAGCAGAAGCAAAGCAAGCAGGTTTCACAGAACCAGA 2387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 CACCAGAAGCTTCAGTGAAGTTGTAGCAGAAGCAAAGCAAGCAGGTTTCACAGAACCAGA 2399
Query 2388 TCCACGAGATGATCTATCTGGAACAGATGTTGCTAGAAAAGTAACAATCCTTGCCAGAGA 2447
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2400 TCCACGAGATGATCTATCTGGAACAGATGTTGCCAGAAAAGTAACAATCCTTGCCAGAGA 2459
Query 2448 ATCAGGCTTGAAATTGGATCTTGAGGGCCTTCCAGTCCAGAATCTTGTGCCAAAGCC-TC 2506
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2460 ATCAGGCTTAAAATTGGATCTTGAGGGCCTTCCAGTCCAGAATCTTGTGCCAAAGCCGT- 2518
Query 2507 TACAAGCTTGTGCATCAGCAGAAGAGTTTATGGAGAAGCTACCTCAGTTTGATGAAGAAT 2566
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 2519 TACAAGCTTGTGCATCAGCAGAAGAGTTCATGGAGAAGCTTCCTCAGTTTGATGAAGAAT 2578
Query 2567 TATCCAAACAAAGAGAAGAGGCTGAAGCGGCAGGAGAAGTCTTGAGATACGTAGGAGTTG 2626
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2579 TATCCAAACAAAGAGAAGAGGCTGAAGCAGCAGGAGAAGTCTTGAGATACGTAGGAGTTG 2638
Query 2627 TAGACGCAGTAGAGAAAAAGGGAACAGTCGAGTTGAAACGGTACAAAAAAGATCATCCGT 2686
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2639 TAGATGCAGTAGAGAAAAAGGGAACAGTCGAGTTGAAACGGTACAAAAAAGATCATCCGT 2698
Query 2687 TTGCTCAGCTCTCGGGCGCTGATAACATCATCGCTTTCACAACCAAACGGTACAAAGATC 2746
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2699 TTGCTCAGCTATCGGGTGCTGATAACATCATCGCTTTCACAACCAAACGGTACAAAGAAC 2758
Query 2747 AGCCTCTAATTGTTCGTGGACCTGGTGCTGGTGCTCAAGTTACAGCCGGTGGAATCTTCA 2806
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2759 AGCCTCTGATTGTTCGTGGACCTGGTGCTGGTGCTCAAGTCACAGCCGGTGGAATCTTCA 2818
Query 2807 GTGACATTCTTCGCCTTGCATTCTATCTCGGGGCTCCGTCTTAAGGCACAATCTACATGC 2866
||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct 2819 GTGACATTCTTCGCCTTGCTTTCTATCTCGGGGCTCCGTCTTAAAGCACACTCTACATGC 2878
Query 2867 TAG-ATCTGTAATTTGGATTCCAGAGATTTTGATT-CTTATAGATGAAACCAAACGTCAT 2924
||| || |||| |||||||| |||||||||||||| || |||||||| ||||||| |||
Sbjct 2879 TAGCATATGTATTTTGGATTTCAGAGATTTTGATTTCT-ATAGATGATACCAAACTTCAA 2937
Query 2925 GGTAATAAAACACTCTAGGAAAAAATTGAATAAAGGCTGTTGGTAT 2970
|||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 2938 GGTAATAAAACATTCTAGGAAAAAATTGAATAAAGACTGTTGGTAT 2983
> AT4G19710.2 | Symbols: AK-HSDH II, AK-HSDH | aspartate kinase-homoserine
dehydrogenase ii | chr4:10724855-10729768 FORWARD
LENGTH=3160
Length=3160
Score = 1459 bits (790), Expect = 0.0
Identities = 1977/2541 (78%), Gaps = 118/2541 (5%)
Strand=Plus/Plus
Query 369 TGTACACAAATTTGGAGGAACTTGTGTGGGAAATTCTGAGAGGATAAAG-GATGTTGCTG 427
||| ||||| ||||| || |||||||||||||| ||| ||||||| || |||| || |
Sbjct 447 TGTTCACAAGTTTGGTGGGACTTGTGTGGGAAACTCTCAGAGGAT-CAGAAATGTAGCAG 505
Query 428 ATGTTGTTGTTAAGGATGACTCTGAGAG-CAAGTTGGTGGTTGTGTCAGCAATGGCGAAA 486
| ||| | | || ||| | || || || || || |||||||| || || ||| ||||
Sbjct 506 AGGTTATAATCAATGATAATTCCGAAAGAAAACTT-GTGGTTGTCTCGGCGATGTCGAAG 564
Query 487 GTCACTGATATGATGTATGATCTT-ATTCAC-AGAGCACAGTCTCGGGATGATTCATATC 544
|| || || ||||||||||| ||| || | | || ||||| || || |||||||| |||
Sbjct 565 GTTACGGACATGATGTATGA-CTTAATCCGCAAG-GCACAATCACGAGATGATTCTTATT 622
Query 545 TGTCTGC-TTTG-AGCGGTGTTCTT-GAAAAGCACCGAGCAACGGCT-GTTGA-CTTGCT 599
| || || || | ||| || |||| |||||||| || ||| ||| | ||| ||| ||
Sbjct 623 TATCCGCGTTGGAAGC--TG-TCTTGGAAAAGCATCGTTTAACAGCTCG-TGACCTT-CT 677
Query 600 TGATGGAGATGAACTCGCGAGTTTCCTGGCTCGGTTAAATGATGATATAAACAATCTCAA 659
||||||||||| ||||| |||||| || | | || || ||||||| | ||||| ||
Sbjct 678 CGATGGAGATGATCTCGCTAGTTTCTTGTCACATTTGCATAATGATATTAGTAATCTTAA 737
Query 660 AGCAATGCTTCGTGCCATTTACATAGCTGGTCATGCAACCGAATC-TTTCTCAGACTTTG 718
||||||||||||||| || ||||||||||| |||||| | || || ||| ||||| ||||
Sbjct 738 AGCAATGCTTCGTGCTATATACATAGCTGGCCATGCATCAGAGTCGTTT-TCAGATTTTG 796
Query 719 TTGTTGGCCACGGAGAG-TTGTGGTCTGCTCAGATGTTAGC-TGCTGTTGTGAGAAAGAG 776
||| || || || ||| || ||||||||||||||| || | | |||||| |||||||
Sbjct 797 TTGCAGGACATGGGGAGCTT-TGGTCTGCTCAGATGCTATCAT-ATGTTGTCAGAAAGAC 854
Query 777 T-GGATTGGACTGCACA-TGGATGGATGCAAGGGATGTGCTTGTTGTTAGTCCAACAAGC 834
| || || || |||| | ||||||||| | || || ||||| |||||| ||| || |||
Sbjct 855 TGGGCTT-GAGTGCA-AGTGGATGGATACTAGAGACGTGCTCATTGTTAATCCCACCAGC 912
Query 835 TCTAATCAAGTCGACCCTGACTTT-GTGGAATCAGAAAAGAGACTGGAAAAATGGTT-TA 892
|||||||| || || ||||| ||| || ||||| || |||||||| || |||||||| |
Sbjct 913 TCTAATCAGGTTGATCCTGATTTTGGT-GAATCTGAGAAGAGACTCGATAAATGGTTCTC 971
Query 893 CTCAGAACT-CGGC-AAAGATTATTATAGCAACTGGCTTCATAGCCAGTACACCACAGAA 950
|| | || | || | ||| |||||||| || ||||| || || || || || || || ||
Sbjct 972 CTTA-AA-TCCGTCGAAA-ATTATTATTGCGACTGGGTTTATTGCTAGCACTCCGCAAAA 1028
Query 951 CATTCCAACGACTCTCAAGAGGGATGGGAGTGACTTCTCTGCAGCTATAATGGGTGCTCT 1010
|||||||| ||| | || || ||||||||||| ||||| |||||||| ||||||||| |
Sbjct 1029 TATTCCAACAACTTTGAAAAGAGATGGGAGTGATTTCTCAGCAGCTATTATGGGTGCTTT 1088
Query 1011 GTTTAGATCTCACCAACTCACAATCTGGACAGATGTTGATGGTGTGTACAGTGCAGATCC 1070
|| ||| ||| ||| | || || |||||||||||||||||||| |||||||| |||||
Sbjct 1089 ATTGAGAGCTCGTCAAGTAACCATTTGGACAGATGTTGATGGTGTATACAGTGCGGATCC 1148
Query 1071 AAGGAAAGTTAGTGAAGCTGTTG-TACTGAAGACTCTTTCTTACCAAGAGGCTTGGGAAA 1129
| ||||||| ||| || | || |||| |||| |||||||| |||||||| |||||||
Sbjct 1149 TCGTAAAGTTAATGAGGCAG-TGATACTCCAGACACTTTCTTATCAAGAGGCCTGGGAAA 1207
Query 1130 TGTCTTACTTTGGGGCAAACGTTTTACATCCTCGGACCATTATTCCAGTGATGAAATATG 1189
||||||| ||||| ||||| || ||||||||||| ||||| ||||| |||||| ||||
Sbjct 1208 TGTCTTATTTTGGAGCAAATGTGTTACATCCTCGCACCATCATTCCTGTGATGCGATATA 1267
Query 1190 ACATCCCAATTGTAATAAGGAATATTTTCAACCTCTCTGCCCCTGGAACAATGATATGTC 1249
| || || ||||| || || ||||||||||| |||||||| || |||||||| || ||||
Sbjct 1268 ATATTCCGATTGTGATTAGAAATATTTTCAATCTCTCTGCACCGGGAACAATAATCTGTC 1327
Query 1250 GGCAGATTGAAGATGAAGATGGA--TATAAATTAGAC-GCTCCTGTCAAAGGGTTTGCGA 1306
| ||||||||| || || | |||| | ||| ||||||||||||||||||| |
Sbjct 1328 AACCTCCTGAAGATGATTAT-GACCT-TAAACT-GACAACTCCTGTCAAAGGGTTTGCAA 1384
Query 1307 CGATTGACAATTTGGCTCTTGTAAATGTGGAAGGAACTGGAATGGCTGGTGTTCCTGGTA 1366
| |||||||||||||| || ||||||| ||||| ||||||||||||||||| || ||||
Sbjct 1385 CTATTGACAATTTGGCCCTCATAAATGTTGAAGGTACTGGAATGGCTGGTGTACCCGGTA 1444
Query 1367 CTGCCAGTGCCATTTTT-TCTGCTGTCAAGGAAGTTGGAGCTAATGTTATTATGATCTCA 1425
|||| |||| ||||||| ||| ||| || || |||||||||||||| |||||||| |||
Sbjct 1445 CTGCAAGTGACATTTTTGGCTG-TGTAAAAGATGTTGGAGCTAATGTGATTATGATATCA 1503
Query 1426 CAGGCTAGTAGCGAGCATTCTGTGTGCTTTGCTGTACCAGAGAAGGAAGTGAAA-GCTGT 1484
|||||||| || ||||||||||||||||||||||| || ||||||||||| ||| || ||
Sbjct 1504 CAGGCTAGCAGTGAGCATTCTGTGTGCTTTGCTGTGCCTGAGAAGGAAGT-AAACGCAGT 1562
Query 1485 TTCTGAAGCATTGAACTC-ACGATTTCGTCAAGCTTTGGC-TG-GTGGCCGCCTTTCCCA 1541
||||| |||||| || | ||||| || ||||||| | | | || || ||||| ||
Sbjct 1563 CTCTGAGGCATTGCGGTCGA-GATTTAGTGAAGCTTT-ACAAGCG-GGACGTCTTTCTCA 1619
Query 1542 GATTGAAATCATCCCTAATTGTAGCATATTAGCAGCAGTTGGCCAGAAAATGGCGAGCAC 1601
|||||| | || || || |||||||| ||||| ||||| |||||||||||||| || ||
Sbjct 1620 GATTGAGGTGATACCAAACTGTAGCATCTTAGCTGCAGTCGGCCAGAAAATGGCTAGTAC 1679
Query 1602 TCCTGGTGTT--TCTGCCACTTTTTTCAATGCGTTAGCAAAGGCCAATATCAACATCCGT 1659
||||| ||| | || || |||||| ||| || || ||||| ||||| || ||||
Sbjct 1680 ACCTGGAGTTAGT-TG-TACACTTTTCAGTGCTTTGGCGAAGGCTAATATTAATGTCCGA 1737
Query 1660 GCTATAGCTCAAGGTTGCTCCGAGTTCAATATTACAGTAGTCGTCAAGCGTGAAGATTGC 1719
|||||| |||||||||| || |||| |||| |||| || || | || ||||||||| ||
Sbjct 1738 GCTATATCTCAAGGTTGTTCTGAGTACAATGTTACTGTCGTTATTAAACGTGAAGATAGC 1797
Query 1720 ATTAGGGCATTAAGAGCTGTGCACTCAAGATTTTACCTT-TCGAGAACCACTTTGGCAGT 1778
||| ||| ||||||||||| ||||| || |||| ||| || ||||| || || ||| |
Sbjct 1798 GTTAAGGCGTTAAGAGCTGTACACTCGAGGTTTT-TCTTGTCAAGAACAACATTAGCAAT 1856
Query 1779 GGGAATTATAGGACCGGGATTAATTGGTGGAACCTTACTTGATCAGATTAGAGATCAGGC 1838
|||||| |||||||||| || ||||||| ||| |||||||| ||| | | ||||||||
Sbjct 1857 GGGAATCGTAGGACCGGGCTTGATTGGTGCAACATTACTTGACCAGCTGCGGGATCAGGC 1916
Query 1839 GGCAGTGCTCAAAGAAGAATATAAAATTGACT-TGCGTGTTATAGGG-ATCACAGGCTC- 1895
|| || |||||| |||||| ||| ||||| | |||||||| | ||| ||||| || ||
Sbjct 1917 TGCTGTTCTCAAACAAGAATTTAACATTGA-TCTGCGTGTT-TTGGGAATCACTGGTTCA 1974
Query 1896 AAGTAAAATGTTGA-TGAGTGA-ATCGGGGATTGACTTATCAAGATGGAGAAAACTTATG 1953
||| || ||||| | ||||||| || || ||||| || || ||||||||| ||||| |
Sbjct 1975 AAG-AAGATGTT-ATTGAGTGACAT-TGGTATTGATTTGTCGAGATGGAGAGAACTTCT- 2030
Query 1954 AAA-GAAGAAGGAGAA-A-AAGCTAACATGGAGAAGTTCACCCAATATGTGAAGGGAAAT 2010
||| | |||||| ||| | | || | |||| || ||||| ||| | ||| | ||||||
Sbjct 2031 AAACG-AGAAGG-GAACAGAGGCGGATTTGGATAAATTCACTCAACAAGTGCATGGAAAT 2088
Query 2011 CATTTCATTCCAAACTCTGTTA-TGGTTGATTGTACGGCCGA-TGCTGATATCGCTAGCT 2068
||||| || || ||||||| || ||||||||||||| || || | ||| ||| || |||
Sbjct 2089 CATTTTATCCCCAACTCTG-TAGTGGTTGATTGTACAGCAGACT-CTGCTATTGCAAGCC 2146
Query 2069 GTTACTACGACTGGTTGC-TACGAGGAATTCATGTGGTCACTCCGAACAAAAAGGCCAAC 2127
||||||| || ||||| | | | ||||||||||| | || || || |||||||| |||
Sbjct 2147 GTTACTATGATTGGTTACGAAAG-GGAATTCATGTCATTACCCCAAATAAAAAGGCTAAC 2205
Query 2128 TCTGGACCACTTGATCAGTATC-T-AAAGATCAGAGATCTTCAAAGAAAATCGTACACAC 2185
|| || || || |||||||| | | ||| | |||||||||||||| ||||| ||||| |
Sbjct 2206 TCAGGTCCCCTCGATCAGTA-CTTGAAA-CTGAGAGATCTTCAAAGGAAATCCTACACTC 2263
Query 2186 ATTACTTTTATGAAGCAACCGTTGGAGCTGGTCTTCCAATTATCAGCACCTTACGTGGTC 2245
||||||| || ||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct 2264 ATTACTTCTACGAAGCCACTGTTGGAGCTGGTCTTCCAATTATCAGCACTTTACGTGGTC 2323
Query 2246 TCCTCGAAACAGGGGATAAAATACTGCGAATTGAGGGAATTTTCAGTGGTACTTTAAGTT 2305
|||| || ||||| ||||| ||||| || || ||||| |||| |||||| ||||| ||||
Sbjct 2324 TCCTTGAGACAGGAGATAAGATACTACGCATAGAGGGCATTTGCAGTGGAACTTTGAGTT 2383
Query 2306 ACCTCTTCAACAACTTTGTCGGC-ACCAGAAGCTTCAGTGAAGTTGT-AGCAGAAGCAAA 2363
| || |||||||| ||||| || | | |||| ||||| || ||||| | | ||||||||
Sbjct 2384 ATCTATTCAACAATTTTGTTGGAGATC-GAAGTTTCAGCGAGGTTGTCA-CTGAAGCAAA 2441
Query 2364 GCAA-GCAGGTTTCACAGAACCAGATCCACGAGATGATCTATCTGGAACAGATGTTGCTA 2422
| || ||||||||||| || || |||||| |||||||| |||||||||| |||||||| |
Sbjct 2442 G-AACGCAGGTTTCACTGAGCCTGATCCAAGAGATGATTTATCTGGAACTGATGTTGCAA 2500
Query 2423 GAAAAGTAACAATCCTTGC-CAGAGAATCAGG-CTTGAAATTGGATCTTGAGGGCCTTCC 2480
| || || | ||||| || | ||||||| || || ||||||||| || | | || ||
Sbjct 2501 GGAAGGTGATTATCCTCGCTC-GAGAATCTGGACT-GAAATTGGACCTCGCTGATCTCCC 2558
Query 2481 -AGTCCAGAA-TCTTGTGCCA-AAGCCTCTACAAGCTTGTGCATCAGCAGAAGAGTTTAT 2537
| | |||| ||| || ||| || |||||| ||| || | || | ||||| || ||
Sbjct 2559 CATT--AGAAGTCTCGTACCAGAA-CCTCTAAAAGGATGCACTTCTGTTGAAGAATTCAT 2615
Query 2538 GGAGAAGCTACCTCAGTTTGATGAAGAATTATCCAAACAAAGAGA-AGAGGCTGAAG-CG 2595
|||||| || || |||| |||| ||| || | ||| |||| | ||| |||||| |
Sbjct 2616 GGAGAAACTCCCACAGTACGATGGAGACCTAGCAAAAGAAAG-GCTAGATGCTGAAAACT 2674
Query 2596 GCAGGAGAAGT-CTTGAGATACGTAGGAGTTGTAGACGCAGT-AGAGAAAAAGGGAACAG 2653
| || ||||| || |||||| || ||||| || ||||| || | | ||||||||||||
Sbjct 2675 -CTGGGGAAGTTCT-GAGATATGTTGGAGTGGTGGACGCTGTTA-ACCAAAAGGGAACAG 2731
Query 2654 TCGAG-TT-GAAACGGTACAAAAAAGATCATCCGTTTGCTCAGCTCTCGGGCGCTGATAA 2711
| || || ||| | ||||| ||||| ||||| ||||| |||||| | || | || ||
Sbjct 2732 TTGAACTTCGAA--GATACAAGAAAGAACATCCATTTGCGCAGCTCGCAGGTTCAGACAA 2789
Query 2712 CATCATCGCTTTCACAACCA-AACGGTACAAAGATCAGCCTCTAATTGTTCGTGGACCTG 2770
||| || || |||||||| | || ||||||| ||||| || || || || || |||||||
Sbjct 2790 CATAATAGCCTTCACAACGACAA-GGTACAAGGATCATCCACTTATAGTCCGAGGACCTG 2848
Query 2771 GTGCTGGTGCTCAAGTTACAGCCGGTGGAATCTTCAGTGACATTCTTCGCCTTGCATTCT 2830
| |||||||||||||| || |||||||| || ||||| ||||| || | ||||||| ||
Sbjct 2849 GAGCTGGTGCTCAAGTCACGGCCGGTGGTATATTCAGCGACATACTAAGGCTTGCAT-CT 2907
Query 2831 -ATCTCGGGGCTCCGTCTTAA 2850
||||||| || |||||||||
Sbjct 2908 TATCTCGGTGCACCGTCTTAA 2928
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 147641313249
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5