BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473645
Length=3255
Score E
Sequences producing significant alignments: (Bits) Value
AT1G31280.1 | Symbols: AGO2 | Argonaute family protein | chr1:1... 4752 0.0
AT1G31290.1 | Symbols: AGO3 | ARGONAUTE 3 | chr1:11188293-11192... 2283 0.0
> AT1G31280.1 | Symbols: AGO2 | Argonaute family protein | chr1:11181711-11185344
FORWARD LENGTH=3343
Length=3343
Score = 4752 bits (2573), Expect = 0.0
Identities = 3048/3272 (93%), Gaps = 53/3272 (2%)
Strand=Plus/Plus
Query 1 ATGGAGAGAGGTGGTTATCGAGGTGGTCGTGGTGATGGCCGTGGTAgaggcggcggagga 60
||||||||||||||||||||||| ||||||||||||||||||||| | ||
Sbjct 67 ATGGAGAGAGGTGGTTATCGAGGAGGTCGTGGTGATGGCCGTGGT-----------A-GA 114
Query 61 ggaggccgtggctatggcggcggcggaggaggaggaggaggaggagAACAAGGTCGTGGT 120
|| |||||||| ||| ||| ||||| ||||||||||||||||||||||||| |
Sbjct 115 GGTGGCCGTGGTTAT------GGC---GGAGGCGGAGGAGGAGGAGAACAAGGTCGTGAT 165
Query 121 CGTGGCTATGGCGGCGGAGGCGGAGAACAAGGTCGTGGTCGTGGTTCAGATCGTGGCGGT 180
|||||||| |||| |||||||||||||||||||||||||| ||||| || |||||
Sbjct 166 CGTGGCTA---CGGC---GGCGGAGAACAAGGTCGTGGTCGTGGCTCAGAGCGAGGCGGC 219
Query 181 GGAAATCGTGGGCAGGGACGTGGTGAACAACAGGATTTTCGTAGCCAGAGTCAGTGGGGA 240
||||||||||| || || ||||||||||||||||||||||| |||||||||||| |||||
Sbjct 220 GGAAATCGTGGTCAAGGTCGTGGTGAACAACAGGATTTTCGAAGCCAGAGTCAGCGGGGA 279
Query 241 CCTCCGCCTGGTCACGGTGGTCGTGGGACG-C-C-G-TCGCAACAACCTCGACCACAGGT 296
|||||||| ||||||||||| ||||||||| | | | || ||||| ||||||||||||||
Sbjct 280 CCTCCGCCAGGTCACGGTGGCCGTGGGACGACGCAGTTC-CAACAGCCTCGACCACAGGT 338
Query 297 GGTTCCGCAGCCGTCGCAAGCTCCGGTTAGTTATGCCGGTTCGGTAGGAGGAGTCGCTGG 356
|| ||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||
Sbjct 339 GGCTCCGCAGCCGTCGCAGGCTCCGGCGAGTTATGCCGGTTCAGTAGGAGGAGTCGCTGG 398
Query 357 TAGAGGCGCGTGGGGTCGTAGGCCACAGGTTTCTTCTGATTCAGCTTCTCCGTCCA-C-- 413
|||||||||||||||||||| |||||||||| | |||||||| ||||||||||||| |
Sbjct 399 TAGAGGCGCGTGGGGTCGTAAGCCACAGGTTCCGTCTGATTCGGCTTCTCCGTCCACCAG 458
Query 414 CACCGTCGTGGTTTCTGAGCCCGTTCGTGTAGCTGAAGTTATGAATCCGAGGCCATCGGT 473
|||| |||||||||||| |||||||||||||||||||||||||||| || |||||||||
Sbjct 459 CACCACCGTGGTTTCTGAACCCGTTCGTGTAGCTGAAGTTATGAATCTGAAGCCATCGGT 518
Query 474 GCAAGTTGTGTCTTCTGATAGGAAAGAACCGATGAAGCGACCTGATAGAGGCGGTGTTGT 533
|||||||| | ||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 519 GCAAGTTGCGACTTCTGATAGGAAAGAACCAATGAAGCGACCTGATAGAGGCGGAGTTGT 578
Query 534 GGCTGTGCGGCGGGTTAATCTCTATGTGAATCATTTTAGAGTGAATTTCGATCCGGAAAG 593
|||||||||||| |||||||| ||||||||||||| || |||||||||| |||| |||||
Sbjct 579 GGCTGTGCGGCGTGTTAATCTATATGTGAATCATTATAAAGTGAATTTCAATCCTGAAAG 638
Query 594 TGTCATAAGACATTATGATGTTGAAATCAAAGGAGAAAATCCTACGAAGAAGATTTCGAG 653
||| |||||||||||||||||||||||||||||||||| |||||| |||||| |||||||
Sbjct 639 TGTTATAAGACATTATGATGTTGAAATCAAAGGAGAAATTCCTACCAAGAAGGTTTCGAG 698
Query 654 GTTTGAGCTAGCTATGGTTAGGGACAAGGTGTTCACTGATAATCCTGATGAGTTTCCCTT 713
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 699 GTTTGAGCTAGCTATGGTTAGGGACAAGGTGTTCACTGACAATCCCGATGAGTTTCCCTT 758
Query 714 CGCTATGACAGCTTATGATGGTCAGAAGAACATTTTCAGCGCAGCTGAATTGCCTACGGG 773
|||||||||||||||||||||||||||||||||||||| || | ||| || ||||||||
Sbjct 759 AGCTATGACAGCTTATGATGGTCAGAAGAACATTTTCAGTGCGGTTGAGTTACCTACGGG 818
Query 774 GTCATATAAGGTGGAGT-TCCCTAAAACTGAAGAGATGAGAGGTCGAAGCTATACATTCA 832
|||||| |||||||||| | ||||||||||||||||||||||||||||||||||| ||||
Sbjct 819 GTCATACAAGGTGGAGTAT-CCTAAAACTGAAGAGATGAGAGGTCGAAGCTATACGTTCA 877
Query 833 TTATCAAACAGGTGAATGAGCTTAAGCTACGCGACTTGAAAGAGTACATGACAGGGAGTT 892
||||||||||||||||| ||| |||||| | |||||||||||||||||||||||||| |
Sbjct 878 CTATCAAACAGGTGAATGTGCTGAAGCTAGGTGACTTGAAAGAGTACATGACAGGGAGAT 937
Query 893 CGTCTTGCAATCCGCGTGATGTGTTGCAAGCAATGGATGTTGTGATGAAGGAGCATCCTT 952
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 938 CGTCTTTCAATCCGCGTGATGTGTTGCAAGGAATGGATGTTGTGATGAAGGAGCATCCTT 997
Query 953 CAAAGTGTATGATCACTGTCGGTAAGAGCTTTTTCACTCGTGAAACTGAGCGAGATGAAG 1012
| ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct 998 CCAAGTGTATGATCACTGTTGGTAAAAGCTTTTTCACTCGTGAAACTGAGCCAGATGAAG 1057
Query 1013 ACTTTGGCTTCGGGGTTGCAGCTGCTAAAGGGTATCGCCACACTCTGAAGCCCACAGCAC 1072
| ||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 1058 ATTTTCGTTTCGGGGTTATAGCTGCGAAAGGGTATCGCCACACTCTGAAGCCCACAGCAC 1117
Query 1073 AAGGTTTGTCTTTGTGTTTGGACTACTCAGTGTTGGCGTTCCGCAAAGCAATGTCGGTCA 1132
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1118 AAGGTTTGTCTTTGTGTTTGGATTACTCGGTGTTGGCGTTCCGCAAAGCAATGTCGGTCA 1177
Query 1133 TTGAATACCTGAAGTTGTACTTTAACTGGCCCGATATGCGTCAGTTTAGGAATTGTAGGC 1192
||||||||||||||||||||||||||||| | |||||||||||||||| | | ||||
Sbjct 1178 TTGAATACCTGAAGTTGTACTTTAACTGGTCTGATATGCGTCAGTTTA-G----G-AGGC 1231
Query 1193 GTGATGTGGAAAAGGAACTGACTGGTTTGAAAGTCACTGTCAATCATCGGAAGAACAAGC 1252
||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1232 GTGATGTGGAAGAGGAATTGATTGGTTTGAAAGTCACTGTCAATCATCGGAAGAACAAGC 1291
Query 1253 AGAAACTCACCATTGTAGGGCTGAGTATGCAAGACACAAAAGACATCAAATTCGATCTTA 1312
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct 1292 AGAAACTCACCATTGTAGGGCTGAGTATGCAAAACACAAAAGACATCAAATTTGATCTTA 1351
Query 1313 TTGATCAAGAGGGAAACGAGCCACCAAGGAAAACGTCCATTGTTGAGTATTTCAGGATAA 1372
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1352 TTGATCAAGAGGGAAACGAGCCGCCAAGGAAGACGTCCATTGTTGAGTATTTCAGGATAA 1411
Query 1373 AGTATGGAAGAGACATTGTTCACAAAGATATTCCTTGCTTGGATTTGGGGAAAAACGGTA 1432
||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||
Sbjct 1412 AGTATGGAAGACACATTGTTCACAAGGATATACCTTGCTTGGATTTGGGAAAAAACGGTA 1471
Query 1433 GGCAAAATTTTGTCCCCATGGAGTTCTGCGACTTGGTTGAGGGACAGATTTATCCAAAGG 1492
||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||||
Sbjct 1472 GGCAAAATTTTGTGCCCATGGAATTCTGTGACTTGGTTGAGGGACAGATATATCCAAAGG 1531
Query 1493 ATGACTTGGATAAAGATTCAGCTTTGTGGTTAAAAAAGTTGTCGCTAGTCAATCCACAAC 1552
|| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||
Sbjct 1532 ATAACTTGGATAAAGATTCAGCTTTGTGGCTAAAAAAGTTGTCACTGGTCAATCCACAAC 1591
Query 1553 AAAGGCAGAGGAATATAGATAAGATGATAAAGTCTCGTAATGGACCGAGCGGTGGAGAAA 1612
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 1592 AAAGGCAGAGGAATATAGATAAGATGATAAAGGCTCGTAATGGACCGAGCGGTGGTGAAA 1651
Query 1613 TAATTGGAAACTTCGGATTGAAAGTGGATACAAACATGACACCGGTGGAAGGTCGTGTAC 1672
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1652 TCATTGGAAACTTTGGATTGAAAGTGGATACAAACATGACACCGGTGGAAGGTCGTGTAC 1711
Query 1673 TCAAGGCTCCAACATTGAAGTTGGCAGAGAGAGGGAGAGCTGTGCGTGAGGAACCCAACC 1732
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1712 TCAAGGCTCCATCATTGAAGTTGGCAGAGAGAGGGAGAGTTGTGCGTGAGGAACCCAACC 1771
Query 1733 CAAGACAGAACAACCAATGGAACCTTATGAAGAAGGGAGTCACAAGGGGATCTATAGTCA 1792
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1772 CGAGACAGAACAACCAATGGAACCTTATGAAGAAGGGAGTCACAAGGGGATCTATAGTCA 1831
Query 1793 AGCATTGGGCTGTACTTGACTTCACCGCATCCGAGAGATTTAACAAGATGCCTAATGACT 1852
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1832 AGCATTGGGCTGTACTTGACTTCACTGCATCCGAGAGATTTAACAAGATGCCTAATGACT 1891
Query 1853 TTGTGGATAACCTCATCGACCGTTGTTGGAGACTTGGGATGCAGATGGAGGCTCCTATAG 1912
||||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct 1892 TTGTGGATAACCTTATTGATCGTTGTTGGAGACTTGGGATGCAGATGGAGGCTCCTATCG 1951
Query 1913 TTTACAAAACATCGAAAATGGAAACACTTTCTAATGGTAATGCTCTTGAGGAATTGCTTC 1972
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1952 TTTACAAAACATCGAGAATGGAAACACTTTCTAATGGTAATGCTATTGAGGAATTGCTTC 2011
Query 1973 GATCTGTGATAGATGAGGCTTTTCGTAAGCATGGTGGGGCTCGTCCAACTCTTGTTCTGT 2032
|||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2012 GATCCGTGATAGATGAAGCTTCTCGTAAGCATGGTGGGGCTCGTCCAACTCTTGTTCTGT 2071
Query 2033 GTGCTATGTCTCGGAAGGACGATGGCTACAAGACTCTGAAATGGATAGCCGAGACCAAAC 2092
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2072 GTGCTATGTCTCGGAAAGACGATGGCTATAAGACTCTGAAATGGATAGCCGAGACCAAAC 2131
Query 2093 TTGGTCTTGTGACTCAGTGTTTCTTGACCGGTTCTGCCACTAAAGGAGGTGATCAGTACC 2152
||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 2132 TTGGTCTGGTGACTCAGTGTTTCTTGACTGGTCCTGCCACTAAAGGAGGTGATCAGTACC 2191
Query 2153 GGGCAAATCTTGCCCTCAAGATGAATGCAAAGGTTGGTGGAAGCAACGTTGAG-TTGATG 2211
||||||||||||||||||||||||| |||||||||||||||||||| || ||| || |||
Sbjct 2192 GGGCAAATCTTGCCCTCAAGATGAACGCAAAGGTTGGTGGAAGCAATGTCGAGCTT-ATG 2250
Query 2212 GATACGTTCTCTTTTTTCCAAAAAGAGGATGAGGTCATGTTCATTGGTGCCGATGTCAAT 2271
||||| |||||||| ||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 2251 GATACTTTCTCTTTCTTCAAAAAAGAGGATGAGGTCATGTTCATTGGTGCTGATGTCAAT 2310
Query 2272 CATCCTGCTGCTCGGGACAAGATGAGCCCGTCTATTGTTGCTGTTGTGGGTACTCTAAAC 2331
||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct 2311 CATCCCGCTGCTCGGGACAAGATGAGCCCGTCCATTGTTGCTGTTGTGGGAACTCTTAAC 2370
Query 2332 TGGCCTGCAGCTAACCGTTATGCAGCTAGAGTCATTGCCCAGCCTCACCGTAAAGAGGAG 2391
||||||| ||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct 2371 TGGCCTGAAGCAAATCGCTATGCAGCTAGAGTCATTGCCCAGCCTCACCGCAAAGAGGAA 2430
Query 2392 ATACAAGGATTTGGCGATGCTTGCCTGGAGCTTGTCAAAGCTCATGTTCAGGCCACCGGG 2451
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||
Sbjct 2431 ATACAAGGATTTGGCGACGCTTGTTTGGAGCTTGTCAAAGCTCATGTTCAGGCCACAGGG 2490
Query 2452 AAACGACCTAACAAGATTGTGATATTCCGTGATGGTGTCAGCGACGCTCAGTTCGATATG 2511
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2491 AAACGGCCTAACAAGATTGTGATATTCCGTGATGGTGTCAGCGATGCTCAGTTCGATATG 2550
Query 2512 GTTCTCAATGTGGAGTTGCTTGATGTTAAGCTGACTTTTGAGAAGAATGGTTACAATCCA 2571
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2551 GTTCTCAATGTGGAGTTGCTTGATGTTAAGCTAACTTTTGAGAAGAATGGTTACAATCCA 2610
Query 2572 AAGATAACGGTAATCGTAGCCCAGAAACGCCATCAAACCCGTTTCTTCCCTGCCACAAGC 2631
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 2611 AAGATAACGGTAATCGTAGCCCAGAAACGTCATCAAACCCGTTTCTTCCCAGCCACAAAT 2670
Query 2632 AATGATGGAAGTGATAAAGGCAATGTGCCTTCAGGTACGGTCGTTGATACTAAAGTCATT 2691
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct 2671 AATGATGGAAGTGATAAGGGCAATGTGCCTTCAGGTACGGTTGTTGATACTAAAGTTATT 2730
Query 2692 CACCCGTATGAGTATGATTTCTACATCTGCAGTCACCATGGAGGGATCGGGACAAGCAAA 2751
|||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||
Sbjct 2731 CACCCGTATGAGTATGATTTCTACCTCTGCAGTCACCACGGAGGGATAGGGACAAGCAAA 2790
Query 2752 CCGACTCATTACTACACCCTTTGGGACGAACTTGGATTCACTTCAGATCAGGTTCAGAAG 2811
||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct 2791 CCGACTCATTACTACACTCTTTGGGACGAACTTGGATTCACTTCGGATCAGGTGCAGAAG 2850
Query 2812 CTCATCTTTGAGATGTGCTTCACTTTCACTCGCTGCACCAAACCTGTCTCTCTTGTTCCT 2871
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2851 CTCATCTTCGAGATGTGCTTCACTTTCACTCGCTGCACCAAACCCGTCTCTCTTGTTCCG 2910
Query 2872 CCGGTGTATTATGCTGACATGGTTGCCTTTAGAGGAAGGATGTACTACGAGGCAAGCTCT 2931
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 2911 CCGGTGTATTATGCTGACATGGTTGCTTTTAGAGGAAGGATGTACCACGAGGCAAGCTCT 2970
Query 2932 CGAGAGAAGAACTTTAGGCAGCCGCGGGGAGCGTCTACCTCAGCTGCTTCGCTTGCCTCT 2991
|| ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 2971 CGTGAGAAGAACTTTAAGCAGCCGCGGGGAGCGTCAACCTCTGCTGCTTCGCTTGCCTCT 3030
Query 2992 TCATTATCTTCTCTTACAGTTGAGGACAAAGCGATATTCAAGCTGCATGCAGAGCTTGAG 3051
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 3031 TCATTATCTTCTCTTACAATTGAGGACAAAGCGATTTTCAAGCTGCATGCAGAGCTTGAG 3090
Query 3052 AACGTTATGTTCTTTGTCTGAAGAAGAGAGTAAGttt-ttttGTGTTTTGGGTCTCAAGC 3110
|| ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 3091 AATGTTATGTTCTTCGTCTGAAGAAGAGAGTGAGTTTCTTTTGTGTTTTGGGTCTCAAGC 3150
Query 3111 TGAACTT--A---ATATTCGAAATCGGAACGCCCCAATAACGCAGTTTTAACTCCTTTTT 3165
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3151 TGAACTTAAACCTATATTCGAAATCGGAACGCCCCAATAACGCAGTTTTAACTCCTTTTT 3210
Query 3166 TCTGGTAGAAAGGAGTTTGTGCGTGAATCTAATTGGGTTTTTCGCAGTGTGTTTATTTCT 3225
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 3211 TCTGGTAGAAAGGAGTTTGTGCGTGAATCTAATTGGGTTTTTCGTAGTGTGTTTCTTTCT 3270
Query 3226 TTTTGGTT--GGTGTGTTGAAACGAATTTGTA 3255
|||||||| ||||||||||||||||||||||
Sbjct 3271 TTTTGGTTTTGGTGTGTTGAAACGAATTTGTA 3302
> AT1G31290.1 | Symbols: AGO3 | ARGONAUTE 3 | chr1:11188293-11192317
FORWARD LENGTH=3585
Length=3585
Score = 2283 bits (1236), Expect = 0.0
Identities = 2201/2655 (83%), Gaps = 114/2655 (4%)
Strand=Plus/Plus
Query 484 TCTTCTGATAGGAAAGAACCGA-TGAAGCGACCTGATAGAGGCGGTGTTGTGGCTGTG-- 540
|||||||||| ||||||||| | | ||||| ||||||| ||| ||| | | |||
Sbjct 979 TCTTCTGATAAGAAAGAACC-AGTAAAGCGTCCTGATAAAGGTGGTAATATAAAAGTGAA 1037
Query 541 CGGCG-GGTTAATCTCTATGTGAATCATTTTAGAGTGAATTTCGATC--CGGAAAGTGTC 597
|||| ||||||||| || |||||||||||||||| |||| || | |||||||||
Sbjct 1038 AGGCGTAATTAATCTCTCCGTCAATCATTTTAGAGTGAGTTTC--TCAACAGAAAGTGTC 1095
Query 598 ATAAGACATTATGATGTTGAAATCAAAGGAGAAAATCCTACGAAGAAGATTTCGAGGTTT 657
||||| || || |||||||| ||||||||||||||| || | || ||||| || || |||
Sbjct 1096 ATAAGGCACTACGATGTTGATATCAAAGGAGAAAATTCTTCAAAAAAGATATCAAGATTT 1155
Query 658 GAGCTAGCTATGGTTAGGGACAAGGTGTTCACTGATAATCCTGATGAGTTTCCCT-TCGC 716
|||||||||||||| | || ||| |||||| || || | |||| ||| ||| |||
Sbjct 1156 GAGCTAGCTATGGTCAAAGAAAAGCTGTTCAAGGACAA---TAATGACTTT-CCTAACGC 1211
Query 717 TATGACAGCTTATGATGGTCAGAAGAACATTTTCAGCGCAGCTGAATTGCCTACGGGGTC 776
|||||||| || |||||||||||||||||||||||||| | |||||| |||||||| ||
Sbjct 1212 CATGACAGCGTACGATGGTCAGAAGAACATTTTCAGCGCTGTTGAATTACCTACGGGATC 1271
Query 777 ATATAAGGTGGAGTTCCCTA-AAACTGA--AGA-GATGAGAGGTCGAAGCTATACATTCA 832
|| ||| || || ||| | | |||| || ||| ||||||||| |||||||||| ||||
Sbjct 1272 ATTTAAAGTTGATTTCTC-AGAAACCGAGGAGATCATGAGAGGTAGAAGCTATACGTTCA 1330
Query 833 TTATCAAACAGGTGAATGAGCTTAAGCTACGCGACTTGAAAGAGTACATGACAGGGA-GT 891
| |||||||| ||||| ||||| ||| ||| |||||| ||| ||||| | | ||| ||
Sbjct 1331 TCATCAAACAAGTGAAAGAGCTAAAGTTACTTGACTTGCAAGCCTACAT-AGATGGACGT 1389
Query 892 TCGTCTTGCAATCCGCGTGATGTGTTGCAAGCAATGGATGTTGTGATGAAGGAGCATCCT 951
|| ||| | |||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 1390 TCCACTTTTATTCCGCGTGATGTGTTGCAAGGAATGGATGTTGTGATGAAGGAACATCCT 1449
Query 952 TCAAAGTGTATGATCACTGTCGGTAAGAGCTT-TTTCACTCGTGAAACT-GAGCGAGATG 1009
||||| ||||||||||||| ||||| || || ||| | || ||| | || ||| |
Sbjct 1450 TCAAAACGTATGATCACTGTTGGTAAAAGATTCTTT-A---GT---ACTCG-GCTAGA-G 1500
Query 1010 A-AGACTTTGGCTTCGGGGTTGCAGCTGCTAAAGGGTATCGCCACACTCTGAAGCCCACA 1068
| |||||||| | ||| |||| |||||| ||||||| || ||||||||| |||||||||
Sbjct 1501 ATTGACTTTGGATACGGAGTTGGAGCTGCGAAAGGGTTTCACCACACTCTCAAGCCCACA 1560
Query 1069 GCACAAGGTTTGTCTTTGTGTTTGGACTACTCAGTGTTGGCGTTCCGCAAAGCAATGTCG 1128
| ||||||||| || || |||||| ||| ||| |||||||||||||||||||||| ||
Sbjct 1561 GTACAAGGTTTATCATTATGTTTGAACTCCTCTTTGTTGGCGTTCCGCAAAGCAATTTCA 1620
Query 1129 GTCATTGAATACCTGAAGTTGTACTTTAACTGGCCCGATATGCGTCAGTTTAGGAATTGT 1188
||||| ||||||||||||||||||||| ||| |||| |||||||||| |||||||
Sbjct 1621 GTCATCGAATACCTGAAGTTGTACTTTGGGTGGAGAAATATACGTCAGTTTAAGAATTGT 1680
Query 1189 AGG-C-G-TGATGTGG-AAAAGGAACTGACTGGTTTGAAAGTCACTGTCAATCATCGGAA 1244
||| | | ||| |||| | || ||| ||| |||||||||||||||||| ||||||| ||
Sbjct 1681 AGGCCTGATGACGTGGTACAA-GAATTGATTGGTTTGAAAGTCACTGTTGATCATCGAAA 1739
Query 1245 GAACAAGCAGAAACTCACCATTGTAGGGCTGAGTATGCAAGACACAAAAGACATCAAATT 1304
|| ||| |||||| ||| |||| | ||| |||||| | | ||||||||||| ||||||||
Sbjct 1740 GACCAAACAGAAATTCATCATTATGGGGTTGAGTAAGGACGACACAAAAGATATCAAATT 1799
Query 1305 CGATCTTATTGATCAAGAGGGAAACGAGCCACCAAGGAAAACGTCCATTGTTGAGTATTT 1364
|||| |||||||||| | |||||| |||| |||||||||| |||||||||||||||||
Sbjct 1800 CGATTTTATTGATCATGCTGGAAACCAGCCTCCAAGGAAAATATCCATTGTTGAGTATTT 1859
Query 1365 C-AGGATAAAGTATGGAAGAGACATTGTTCACAAAGATATTCCTTGCTTGGATTTGGGGA 1423
| |||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct 1860 CAAGGA-AAAGTATGGAAGAGACATTGATCACAAGGATATTCCTTGCTTGAATTTGGGGA 1918
Query 1424 AAAACGGTAGGCAAAATTTTGTCCCCATGGAGTTCTGCGACTTGGTTGAGGGACAGATTT 1483
|||| ||| || |||||||||| |||||||||||||| |||| || ||||| |||||||
Sbjct 1919 AAAAGGGTCGGGAAAATTTTGTACCCATGGAGTTCTGTAACTTAGTCGAGGGGCAGATTT 1978
Query 1484 ATCCAAAGGATG-ACTTGGATAAAGATTCAGCTTTGTGGTTAAAAAAG-TTGTCGCTAGT 1541
|||||| || | | ||| ||| ||||||||| ||||||||| || || || |||||
Sbjct 1979 TTCCAAAAGA-GAAATTGTATAGAGATTCAGCCGCGTGGTTAAAGGAGCTT-TCACTAGT 2036
Query 1542 CAATCCACAACAAAGGC-AGAGGAATATAGATAAGATGATAAAGTCTCGTAATGGACCGA 1600
|| |||||||||||| | || ||||||| ||||||||||||||||| || ||||||| |
Sbjct 2037 CACTCCACAACAAAGACTGGA-GAATATAAATAAGATGATAAAGTCTAGTGATGGACCTA 2095
Query 1601 GCGGTGGAGAAATAATTGGAAACTTCGGATTGAAAGTGGATACAAACATGACACCGGTGG 1660
| |||||||| || ||||||||||||||||||| ||||||| ||||||||||| ||||||
Sbjct 2096 GAGGTGGAGATATCATTGGAAACTTCGGATTGAGAGTGGATCCAAACATGACAACGGTGG 2155
Query 1661 AAGGTCGTGTACTCAAGGCTCCAACATTGAAGTTGGCAGA---GAGAGGGAGA-GCTGTG 1716
|||||||||||||| ||||||| ||| |||| ||| | || |||||| | | || |
Sbjct 2156 AAGGTCGTGTACTCGAGGCTCCTACACTGAAATTGACTGATCGGAGAGGCA-ATCCTATC 2214
Query 1717 CGTGAGGAACCCAACCCAAGA-C-AGAACAACCAATGGAACCTTATGA-AGAAGGGAGTC 1773
| ||| | | ||| || || | ||| ||| ||||||||||||| || | |||||||||
Sbjct 2215 CATGA-G-A---AACTCATGAGCGAGAGCAATCAATGGAACCTTACGACA-AAGGGAGTC 2268
Query 1774 ACAAGGGGATCTATAGTCAAGCATTGGGCTGTACTTGACTTCACCGCATCCGAGAGATTT 1833
|||| ||| || ||| |||||||||||||||| ||||||||||| ||||||||||| |||
Sbjct 2269 ACAAAGGGTTCAATAATCAAGCATTGGGCTGTTCTTGACTTCACTGCATCCGAGAG-TTT 2327
Query 1834 ----AACAAGATGCCTAATGACTTTGTGGATAACCTCATCGACCGTTGT-TGGAGACTTG 1888
|| ||||||||| | ||||||| |||| |||||||| |||||| || ||||||
Sbjct 2328 GAAAAAAAAGATGCCTGGTTACTTTGTAAATAAACTCATCGAACGTTGTAAGG-GACTTG 2386
Query 1889 GGATGCAGATGGAGGCTCCTATAGTTTACAAAACATCGAAAATGGAAACACTTTCTAATG 1948
|||||||||||||||||||||| |||| ||||||||||| ||||||||||||| | |||
Sbjct 2387 GGATGCAGATGGAGGCTCCTATCGTTTGCAAAACATCGAGTATGGAAACACTTTATGATG 2446
Query 1949 GTAATGCTCTTGAGGAATTGCTTCGATCTGTGATAGATGAGGCTTTTCGTAAGCATGGTG 2008
|||||||||||||||||||||||||||| |||||||||||||||| || ||| |||||||
Sbjct 2447 GTAATGCTCTTGAGGAATTGCTTCGATCCGTGATAGATGAGGCTTCTCATAACCATGGTG 2506
Query 2009 GGGCTCGTCCAACTCTTGTTCTGTGTGCTATGTCTCGGAAGGACGATGGCTACAAGACTC 2068
||||| |||||||||||||||||||||||||| || ||||| ||||||| ||||||||||
Sbjct 2507 GGGCTTGTCCAACTCTTGTTCTGTGTGCTATGACTGGGAAGCACGATGGATACAAGACTC 2566
Query 2069 TGAAATGGATAGCCGAGACCAAACTTGGTCTTGTGACTCAGTGTTTCTTGACCGGT-TCT 2127
||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||
Sbjct 2567 TGAAATGGATAGCCGAGACCAAACTTGGTCTAGTGACTCAGTGTTTCTTGACC-ATATCT 2625
Query 2128 GCCACTAAAGGAG-----G----TGATCAGTACCGGGCAAATCTTGCCCTCAAGATGAAT 2178
|||| |||||||| | |||||||||| ||||||||| ||||||||||| ||
Sbjct 2626 GCCATTAAAGGAGAAACCGTTTCTGATCAGTACTTGGCAAATCTCGCCCTCAAGATAAAC 2685
Query 2179 GCAAAGGTTGGTGGAAGC-AACGTTGAGTTGATGG---ATACGTTCTCTTTTTTCCAAAA 2234
|||||||||||||||| | ||||| |||||| ||| ||| |||||||| ||| ||||
Sbjct 2686 GCAAAGGTTGGTGGAA-CGAACGTGGAGTTGGTGGATAATATTTTCTCTTTCTTCAAAAA 2744
Query 2235 AGAGGATGAGGTCATGTTCATTGGTGCCGATGTCAATCATCCTGCTGCTCGGGACAAGAT 2294
||| ||| ||||||||||||||||||| |||||||||||||| ||||||| ||||| ||
Sbjct 2745 AGAAGATAAGGTCATGTTCATTGGTGCTGATGTCAATCATCCCGCTGCTCACGACAATAT 2804
Query 2295 GAGCCCGTCTATTGTTGCTGTTGTGGGTACTCTAAACTGGCCTGCAGCTAACCGTTATGC 2354
||| || || |||||||||||||| || ||||| |||||||||| ||||||||| || ||
Sbjct 2805 GAGTCCATCCATTGTTGCTGTTGTAGGCACTCTTAACTGGCCTGAAGCTAACCGCTACGC 2864
Query 2355 AGCTAGAGTCATTGCCCAGCCTCACCGTAAAGAGGAGATACAAGGATTTGGCGATGCTTG 2414
||||||||||| || ||| |||||||||||| ||||||||||| ||||| || ||||
Sbjct 2865 AGCTAGAGTCAAAGCTCAGAGTCACCGTAAAGAAGAGATACAAGGGTTTGGTGAAACTTG 2924
Query 2415 CCT-GGAGCTTGTCAAAGCTCATGT-TCAGGCCACCGGGAAACGACCTAACAAGATTGTG 2472
|| ||||||| || |||||||| | ||||||| ||| ||||||||||||||||||||||
Sbjct 2925 -CTGGGAGCTTATCGAAGCTCAT-TCTCAGGCCCCCGAGAAACGACCTAACAAGATTGTG 2982
Query 2473 ATATTCCGTGATGGTGTCAGCGACGCTCAGTTCGATATGGTTCTCAATGTGGAGTTGCTT 2532
||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
Sbjct 2983 ATATTCCGTGATGGTGTCAGCGATGGTCAGTTCGATATGGTTCTCAATGTGGAGTTACA- 3041
Query 2533 GA-TGTTAAGCTGAC-TTTT-GAGAAGAATGGTTACAATCCAAAGATAACGGTAATCGTA 2589
|| ||||||| ||| |||| | ||| ||| || ||||| ||||||| ||||| ||
Sbjct 3042 GAATGTTAAG--GACGTTTTTGCCAAGGTTGGCTATAATCCGCAGATAACTGTAATTGTG 3099
Query 2590 GCCCAGAAACGCCATCAAACCCGTTTCTTCCCTGCCACAA---GCAATGATGGAAGTGAT 2646
|| |||||||| |||||||||||||||||||| ||||||| |||| |||||||| | |
Sbjct 3100 GCACAGAAACGTCATCAAACCCGTTTCTTCCCCGCCACAACTAGCAAAGATGGAAGGGCT 3159
Query 2647 AAAGGCAATGTGCCTTCAGGTACGGTCGTTGATACTAA-AGTCATTCACCCGTATGAGTA 2705
|| |||||||||||||||||||||||||||||||| | | |||||||||||| ||||||
Sbjct 3160 AAGGGCAATGTGCCTTCAGGTACGGTCGTTGATACCACGA-TCATTCACCCGTTTGAGTA 3218
Query 2706 TGATTTCTACATCTGCAGTCACCATGGAGGGATCGGGACAAGCAAACCGACTCATTACTA 2765
|||||||||| |||| ||||| ||||||| ||| || ||||||||||| |||||||| ||
Sbjct 3219 TGATTTCTACCTCTGTAGTCAACATGGAGCGATAGGTACAAGCAAACCAACTCATTATTA 3278
Query 2766 CACCCTTTGGGACGAACTTGGATTCA-CTTCAGA-TCAGGTTCAGAAGCTCATCTTTGAG 2823
|||| ||||||| | || |||| || | || |||| ||||||| |||||||||||
Sbjct 3279 TGTTCTTTCGGACGAAATCGGGTTCAACT-C-GAATCAGATTCAGAAACTCATCTTTGAC 3336
Query 2824 ATGTGCTTCAC-TTTCACTCGCTGCACCAAACCTGTCTCTCTTGTTCCTCCGGTGTATTA 2882
|||||||||| ||| ||||||||||||||||| ||| |||| ||||||||||| | |||
Sbjct 3337 TTGTGCTTCACGTTT-ACTCGCTGCACCAAACCGGTCGCTCTGGTTCCTCCGGTTTCTTA 3395
Query 2883 TGCTGACATGGTTGCCTT-TAGAGGAAGGATGTACTACGAGGCAAGCTCTCGA-GA-GAA 2939
|||||||| || ||| || |||||||||| |||||||||||||||||| | | || |||
Sbjct 3396 TGCTGACAAGGCTGC-TTCTAGAGGAAGGGTGTACTACGAGGCAAGCT-TA-ATGAAGAA 3452
Query 2940 GAACTT-TAGGCAGCCGCGGGGAGCGTCTACCTCAGCTGCTTCGCTTGCCTCTTCATTAT 2998
||| || || |||| |||| ||||||||| | || |||| ||| |||||||||||| |
Sbjct 3453 GAA-TTCTAAGCAGTCGCGTGGAGCGTCTTCGTCTTCTGCCTCGGTTGCCTCTTCATCCT 3511
Query 2999 CTTCTCTTACAGTTGAGGACAAAGCGATATTCAAGCTGCATGCAGAGCTT-GAGAACGTT 3057
||||| | ||| | |||||||||| ||| |||||| | || |||| || | |||||| ||
Sbjct 3512 CTTCTGTCACAATGGAGGACAAAGAGATCTTCAAGGTTCACGCAG-GCATCGAGAACTTT 3570
Query 3058 ATGTTCTTTGTCTGA 3072
|||||||||||||||
Sbjct 3571 ATGTTCTTTGTCTGA 3585
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 161938892004
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5