BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg473845
Length=1650
Score E
Sequences producing significant alignments: (Bits) Value
AT1G45201.1 | Symbols: ATTLL1, TLL1 | triacylglycerol lipase-li... 2577 0.0
> AT1G45201.1 | Symbols: ATTLL1, TLL1 | triacylglycerol lipase-like
1 | chr1:17123821-17128651 FORWARD LENGTH=1697
Length=1697
Score = 2577 bits (1395), Expect = 0.0
Identities = 1571/1655 (95%), Gaps = 16/1655 (1%)
Strand=Plus/Plus
Query 1 TTCTTCTTTCTTCTTATATT-TGAGCAAAGTTTGTTCTTCCTTTCATATTGTGAAAATGT 59
|||| |||||||||||| || |||||||||||| |||||||||||||||||||| ||||
Sbjct 14 TTCTCCTTTCTTCTTAT-TTCTGAGCAAAGTTTTTTCTTCCTTTCATATTGTGAGGATGT 72
Query 60 CCCAAACCAATATGAAATTTTGCAATAGTTATTTTCTGGTCGATCCGACCAAAGCAAGTT 119
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73 CCAAAACCAATATGAAATTTTGCAATAGTTATTTTCTGGTCGATCCGACCAAAGCAAGTT 132
Query 120 TTCTTGATCTCCTTCTGCTTTTGTTTTCCTTCAACCTGACCAGCGCAAGATTCATCGATT 179
|||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 133 TTCTTGATCTCCTTTTGCTTTTGTTTTCCTCCAACCTGACCAGTGCAAGATTCATCGATT 192
Query 180 CTCCTCCGGATACACTCAAAAGCTTCCGGAGAAGTTTTGCGAGTCGATGGATCCTTGCGT 239
||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 193 CTCCTCCGGATACGCTTAAAGGCTTCCGGAGAAGTTTCGCGAGTCGATGGATCCTTGCGT 252
Query 240 TGGCCATATTGCTTCAAAAAGTATTAATGCTCTTGAGTAAACCTTTTGCATTTC-TTGGT 298
||||||| || ||||||||||||||||||||||| ||||||||||||||| ||| |||||
Sbjct 253 TGGCCATCTTCCTTCAAAAAGTATTAATGCTCTTAAGTAAACCTTTTGCA-TTCATTGGT 311
Query 299 CGTTTGCTCACATATTGGCTCAACCTTCTTACGGCAAATGGAGGCTTCTTCAACTTGATA 358
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 312 CAAAAGCTCACATATTGGCTCAACCTTCTTACGGCAAATGGAGGCTTCTTCAACTTGATA 371
Query 359 CTTAACCTTTTGACAGGAAAGCTGGTGAAGCCTGACAAATCTTCGGCGACATATACTTCG 418
||||||||| || ||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 372 CTTAACCTTATGTCAGGAAAGCTGGTCAAGCCTGACAAATCTTCGGCGACGTATACTTCT 431
Query 419 TTTATAGGATGCTCGGATCGACGAATAGAGCTTGACGAGAAGATAAATGTTGGTAGCATC 478
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 432 TTTATAGGATGCTCAGATCGACGAATAGAGCTTGACGAGAAGATAAATGTTGGTAGCATC 491
Query 479 GAATACAAGTCGATGTTGTCAATAATGGCTTCTAAGATCGCTTATGAGAGCAAACCTTTC 538
|||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 492 GAATACAAATCGATGTTGTCAATAATGGCTTCTAAGATCTCTTATGAGAGCAAACCTTAC 551
Query 539 GTCAATTCCGTCGTCAAGAACACTTGGAAGATGGACTTGGTGGGTAACTACGACTTTTAC 598
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 552 ATCACTTCCGTCGTCAAAAACACTTGGAAGATGGACTTGGTGGGTAACTACGACTTTTAC 611
Query 599 AACGCTTTCCAAGAAAGTAAATTGACGCAAGCCTTCGTGTTCAAGACTTCGAGCACCAAT 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 612 AACGCTTTCCAAGAAAGTAAATTGACGCAAGCCTTCGTGTTCAAGACTTCGAGCACCAAT 671
Query 659 CCAGACCTCATCGTCGTTAGCTTCAGAGGAACCGAACCTTTCGAAGCTGCCGATTGGTGC 718
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 672 CCAGACCTCATCGTCGTTAGCTTCAGAGGAACCGAACCTTTCGAGGCTGCCGATTGGTGC 731
Query 719 ACTGATCTCGACCTCTCTTGGTACGAGTTGAAGAACGTTGGCAAAGTCCACGCTGGGTTC 778
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 732 ACTGATCTCGACCTCTCTTGGTACGAGATGAAGAACGTTGGCAAAGTCCACGCCGGGTTC 791
Query 779 TCAAGAGCTTTAGGCCTCCAAAAAGATGGAGGATGGCCCAAGGAAAATATAAGTCTTCTA 838
|||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct 792 TCAAGAGCTTTAGGTCTCCAAAAAGATGGA---TGGCCCAAGGAAAATATTAGTCTACTA 848
Query 839 CACCAATATGCTTACTACACCATCAGACAGATGCTTAGGGACAAGCTTGCCAGAAACAAG 898
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 849 CACCAATATGCTTACTACACCATCAGACAGATGCTTAGAGACAAGCTTGGCAGAAACAAG 908
Query 899 AACCTTAAGTATATTCTAACAGGTCACAGCCTTGGCGGAGCACTAGCTGCTCTTTTTCCG 958
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 909 AACCTTAAATATATTCTAACAGGTCACAGCCTTGGCGGAGCACTAGCTGCTCTTTTCCCG 968
Query 959 GCGATTCTAGCGATTCATGGTGAGGATGAGCTGCTAGATAAGCTAGAGGGAATCTATACG 1018
|||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 969 GCGATTCTGGCCATTCACGGTGAGGATGAGCTGCTAGATAAGCTAGAGGGAATCTATACG 1028
Query 1019 TTTGGACAACCACGTGTAGGGGATGAGGATTTTGGTGAGTTTATGAAGGGTGTGGTGAAA 1078
|||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1029 TTTGGACAGCCACGTGTAGGAGATGAGGACTTTGGTGAGTTTATGAAGGGTGTGGTGAAA 1088
Query 1079 AAGCATGGAATAGAGTATGAGAGATTCGTCTATAACAATGATGTTGTGCCTAGAGTGCCT 1138
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1089 AAGCATGGAATAGAGTATGAGAGATTCGTCTATAACAATGATGTTGTGCCTAGAGTGCCC 1148
Query 1139 TTTGATGACAAGTTA-TTATTCTCATACAAGCACTATGGACCTTGCAATTCCTTCAACAG 1197
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149 TTTGATGACAAGT-ACTTATTCTCATACAAGCACTATGGACCTTGCAATTCCTTCAACAG 1207
Query 1198 TCTCTACAAAGGAAAGGTAAGAGAAGATGCACCAAATGCAAACTACTTCAACTTGTTGTG 1257
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1208 TCTCTACAAAGGAAAGGTAAGAGAAGATGCACCAAATGCGAACTACTTCAACTTGTTGTG 1267
Query 1258 GTTAATACCGCAGCTATTGACTGGTTTGTGGGAGTTTATAAGAAGTTTCATATTACAGTT 1317
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1268 GTTAATACCGCAGCTGTTGACTGGTTTGTGGGAGTTTATAAGGAGTTTCATATTACAGTT 1327
Query 1318 TTGGAAAGGCGAAGATTACAAAGAGAATTGGTTGATGAGATTTGTTAGGGTTGTGGGAAT 1377
|||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1328 TTGGAAAGGCGACGAGTACAAAGAGAATTGGTTAATGAGATTTGTTAGGGTTGTGGGAAT 1387
Query 1378 AGTGTTCCCTGGTGGCTCTAACCATTTCCCATTTGATTACGTCAATTCTACGCGCCTAGG 1437
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1388 AGTGTTCCCTGGTGGCTCTAACCATTTCCCATTTGATTACGTCAACTCTACTCGCCTAGG 1447
Query 1438 AGGCTTGGTTCGACCTCCTCCTAGTACTACTCCTGAAGATAAACTTGCCCTCATTGCTTG 1497
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 1448 AGGCTTGGTTCGACCTCCTCCTACTACTACTCCTGAGGATAAACTTGCCCTCATTGCTTG 1507
Query 1498 AACTCTCAATGTTTTATAATCCTATCCACTTTATCTGCCCTAATG-CGGTTAAATAATTG 1556
|||||||| | ||| |||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1508 AACTCTCATTATTTAATAATCATATCCACTTTATCTGCCCTAATGACGGTTAAATAATTG 1567
Query 1557 TACTTGAGCTTTAACT-TATTCTCTGTGTTATATGTCTTGTGTACGTGAGTTTTTATGTT 1615
||||||||||||| | ||||||||||||||| ||| || |||| |||||||||||||||
Sbjct 1568 CACTTGAGCTTTAA-TGTATTCTCTGTGTTATGTGTTTT-TGTATGTGAGTTTTTATGTT 1625
Query 1616 GGTAATAACACTATCTACTTTTTCTTATCTTCTGA 1650
||||| || ||||||| ||||||||||||||||
Sbjct 1626 GGTAACAA---TATCTACCTTTTCTTATCTTCTGA 1657
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81525685080
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5