BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473866 Length=1666 Score E Sequences producing significant alignments: (Bits) Value AT1G47128.1 | Symbols: RD21, RD21A | Granulin repeat cysteine p... 2634 0.0 AT5G43060.1 | Symbols: | Granulin repeat cysteine protease fam... 996 0.0 > AT1G47128.1 | Symbols: RD21, RD21A | Granulin repeat cysteine protease family protein | chr1:17282825-17285670 REVERSE LENGTH=1764 Length=1764 Score = 2634 bits (1426), Expect = 0.0 Identities = 1599/1681 (95%), Gaps = 18/1681 (1%) Strand=Plus/Plus Query 1 CATACAATCGTCTTCTTCATCATTTTCTCTTCTTCTTCTCCAAGAAAACAGTGAAGAAGA 60 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1 CATACAATCGTCTTCTTCATCATTTTCTCTTCTTCTTCTCCAAGAAAACACTGAAGAAG- 59 Query 61 AAATGGGGTTCCTTAAGCCAGCCATAGCGATCCTTTTCCTAGCGATGGTCGCCGTTGCAT 120 |||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||| ||| Sbjct 60 AAATGGGGTTCCTTAAGCCAACCATGGCGATTCTTTTTCTAGCGATGGTCGCCGTTTCAT 119 Query 121 CAGCCGTGGACATGTCAATCATCTCCTACGACGAGAAACACGGCGTCTCCACCACCGGTG 180 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 120 CAGCCGTGGACATGTCAATCATCTCCTACGACGAGAAACATGGCGTCTCCACCACCGGTG 179 Query 181 GCCGTAGCGACGCAGAGGTCATGAGTATCTACGAGGCGTGGTTGGTGAAACACGGGAAGG 240 |||||||||| || ||||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct 180 GCCGTAGCGAAGCCGAGGTTATGAGTATCTACGAGGCATGGTTGGTGAAACACGGCAAGG 239 Query 241 GTCAGAATCAGAACTCTCTTGTTGAGAAAGATCGACGTTTCGAGATCTTTAAAGATAATC 300 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 240 CTCAGAGCCAGAACTCTCTTGTTGAGAAAGATCGACGGTTCGAGATCTTTAAAGACAATC 299 Query 301 TTCGTTTCATCGACGATCATAACAAGAAGAATCTTAGTTATAGATTGGGTTTGACTCGGT 360 |||||||| |||| || |||||| |||||||||||||||||||||||||||||||||| | Sbjct 300 TTCGTTTCGTCGATGAACATAACGAGAAGAATCTTAGTTATAGATTGGGTTTGACTCGTT 359 Query 361 TTGCGGATCTTACTAACGATGAGTATAGATCCAAGTATCTTGGAGCTAAGATGGAGAAGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 TTGCGGATCTTACTAACGATGAGTATAGATCCAAGTATCTTGGAGCTAAGATGGAGAAGA 419 Query 421 AAGGTGAGAGAAGGACTAGCCAACGGTACGAGGCTCGTGTCGGTGATGAGCTACCAGAGT 480 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 420 AAGGTGAGAGAAGGACTAGCCTACGGTACGAGGCTCGTGTCGGTGATGAGCTACCGGAGT 479 Query 481 CTATTGACTGGAGGAAGAAAGGAGCCGTGGCTGAGGTCAAAGATCAGGGTAGTTGCGGGA 540 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 480 CTATTGACTGGAGGAAGAAAGGAGCCGTGGCTGAGGTCAAAGATCAGGGTGGTTGCGGGA 539 Query 541 GTTGTTGGGCATTCTCAACCACTGGAGCAGTGGAGGGGATTAACCAGATCGTAACCGGAG 600 |||||||||| || ||||||| ||||||||||||||| || ||||||||||||||||||| Sbjct 540 GTTGTTGGGCGTTTTCAACCATTGGAGCAGTGGAGGGAATAAACCAGATCGTAACCGGAG 599 Query 601 ACTTAATATCCTTGTCCGAACAAGAGTTGGTCGATTGTGACACTTCATACAACGAAGGTT 660 || ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 ACCTAATAACCTTGTCTGAACAAGAGTTGGTCGATTGTGACACTTCATACAACGAAGGTT 659 Query 661 GTAACGGAGGTCTCATGGACTATGCTTTTGAGTTCATTATCAAGAATGGTGGAATCGATA 720 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 GTAACGGAGGTCTTATGGACTATGCTTTTGAGTTCATTATCAAGAATGGTGGAATCGATA 719 Query 721 CAGAAAAAGATTATCCTTACAAGGGTGTCGATGGAACTTGTGACCAGATCAGGAAAAACG 780 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 720 CAGACAAAGATTATCCTTACAAGGGTGTTGATGGAACTTGTGACCAGATCAGGAAAAACG 779 Query 781 CTAAAGTTGTCACAATCGATTCATATGAGGATGTTCCCACTTACAGCGAGGAATCGTTGA 840 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 780 CTAAAGTTGTCACTATCGATTCATATGAGGATGTTCCAACTTACAGCGAGGAATCGTTGA 839 Query 841 AGAAAGCAGTTGCTCATCAACCCGTTAGCGTCGCCATTGAGGCTGGTGGTCGTGCGTTCC 900 ||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||| Sbjct 840 AGAAAGCAGTTGCTCATCAACCCATTAGCATTGCCATTGAGGCTGGTGGTCGTGCGTTCC 899 Query 901 AGCTCTATGATTCGGGTATATTTGATGGAACTTGTGGAACACAACTAGACCATGGAGTTG 960 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct 900 AGCTCTATGATTCGGGTATATTTGATGGAAGTTGTGGAACACAACTAGACCACGGAGTTG 959 Query 961 TGGCGGTCGGATACGGAACCGAGAACGGCAAAGACTACTGGATTGTGAGAAACTCATGGG 1020 ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 960 TGGCGGTTGGATACGGAACTGAGAACGGCAAAGATTACTGGATTGTGAGAAACTCATGGG 1019 Query 1021 GTAAAAGCTGGGGAGAGAGTGGATACTTAAAGATGGAGCGTAACATCGCGTCTTCATCCG 1080 |||||||||||||||||||||||||| ||| ||||| ||||||||| ||||||||||| | Sbjct 1020 GTAAAAGCTGGGGAGAGAGTGGATACCTAAGGATGGCGCGTAACATTGCGTCTTCATCAG 1079 Query 1081 GAAAATGTGGAATCGCGATTGAACCTTCATACCCGATCAAGAATGGCGAAAACCCGCCAA 1140 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1080 GAAAATGTGGAATCGCGATTGAACCTTCATACCCGATAAAGAATGGCGAAAACCCGCCAA 1139 Query 1141 ACCCGGGACCTTCACCTCCATCTCCCATCAAGCCTCCAACCCAATGTGACAGTTACTACA 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1140 ACCCGGGACCTTCACCTCCATCTCCCATCAAGCCTCCAACCCAATGTGACAGTTACTACA 1199 Query 1201 CTTGTCCAGAGAGCAACACTTGTTGTTGTCTGTTTGAGTATGGAAAGTATTGCTTTGCTT 1260 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1200 CTTGTCCTGAGAGCAACACTTGTTGTTGTCTGTTTGAGTATGGCAAGTATTGCTTTGCTT 1259 Query 1261 GGGGATGTTGCCCACTAGAAGCTGCCACTTGCTGTGATGACAACTATAGTTGCTGCCCGC 1320 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 1260 GGGGATGTTGCCCACTAGAAGCAGCCACTTGCTGTGATGACAACTATAGTTGCTGCCCTC 1319 Query 1321 ACGAGTACCCGGTTTGTGACCTTGATCAGGGAACCTGTTTATTGAGCAAGAACAGTCCAT 1380 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1320 ACGAGTACCCGGTTTGTGACCTTGATCAAGGAACCTGTTTATTGAGCAAGAACAGTCCAT 1379 Query 1381 TTAGTGTTAAGGCCTTAAAGCGTAAACCCGCAACGCCATTCTGGTCACAAGGCAGAAAGA 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1380 TTAGTGTTAAGGCCTTAAAGCGTAAACCCGCAACGCCATTCTGGTCACAAGGCAGAAAGA 1439 Query 1441 ACATTGCCTAAAACATTGCTTCTTCA------C--------ATGAGAGAAGAGATCTCTC 1486 |||||||||||| ||||||||||||| | ||||||||||||||||||| Sbjct 1440 ACATTGCCTAAA-CATTGCTTCTTCAAGAGGACTCTGGCTCATGAGAGAAGAGATCTCTC 1498 Query 1487 TGAAGGGATTTATCAGATGCTTTTTAATGTTGTTGTTTATGCCATAACTAGATACATAAA 1546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1499 TGAAGGGATTTATCAGATGCTTTTTAATGTTGTTGTTTATGCCATAACTAGATACATAAA 1558 Query 1547 AA-TGCAGCTTTTGGGGTTTCGTGTGTATTAAAAAAGCACCCTAAGTTTCATTCAGTTTC 1605 || ||||||| ||||| |||||||| ||| ||||||| |||||| ||||||||||||||| Sbjct 1559 AAATGCAGCTGTTGGG-TTTCGTGTATATAAAAAAAGGACCCTATGTTTCATTCAGTTTC 1617 Query 1606 ATAGTTGGGTTTCATTGATACAGTAAATTTATTGTTAATTCAAGAAAATTTAATATTTAT 1665 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 1618 ATAGTTGGGTTTCATTGATACAGTACATTTATTGTTAATTCAAGAAAATTGAATATTTAT 1677 Query 1666 G 1666 | Sbjct 1678 G 1678 > AT5G43060.1 | Symbols: | Granulin repeat cysteine protease family protein | chr5:17269507-17272164 REVERSE LENGTH=1716 Length=1716 Score = 996 bits (539), Expect = 0.0 Identities = 1125/1400 (80%), Gaps = 71/1400 (5%) Strand=Plus/Plus Query 89 GATCCTTTTCCTAGCGATGGTCGCCGTTGCATCA-GCCGTGGACATGTCAATCATCTCCT 147 ||||||| ||||||| ||| ||| |||| ||| | ||| ||||||||||||||||||||| Sbjct 74 GATCCTTCTCCTAGCAATGATCGGCGTTTCAT-ATGCCATGGACATGTCAATCATCTCCT 132 Query 148 ACGACGAGAAA-CACGGCGTC-TCCACCACCG-G--TGGCCGTAGCGACGCAGAGG-TCA 201 ||||||| ||| ||| | | | |||||||| | ||||||||||| | |||| | | Sbjct 133 ACGACGA-AAACCAC--C-ACAT-CACCACCGAGACCAGCCGTAGCGACTCGGAGGTTGA 187 Query 202 TGAGTATCTACGAGGCGTGGTTGGTGAAACACGGGAAG--GGTCA-GAATCAGAACTCTC 258 ||| |||||||| |||||| ||||| ||||||||||| | | |||||| ||| || Sbjct 188 -GAGAATCTACGAAGCGTGGATGGTGGAACACGGGAAGAAGAAGATGAATCAAAACGGTC 246 Query 259 TT-GT--TGAGAAAGATCGACGTTTCGAGATCTTTAAAGATAATCTTCGTTTCATCGACG 315 || || |||||||||| | | ||||||||||||||||||||||||||||||||||| | Sbjct 247 TTGGTGCAGAGAAAGATCAAAGATTCGAGATCTTTAAAGATAATCTTCGTTTCATCGATG 306 Query 316 ATCATAACAAGAAGAATCTTAGTTATAGA-TTGGGTTTGACTCGGTTTGCGGATCTT-AC 373 | ||||||| || || || ||||||| | || ||||| || |||||||| ||| || || Sbjct 307 AACATAACACCAAAAACCTCAGTTATAAACTT-GGTTTAACCCGGTTTGCTGAT-TTAAC 364 Query 374 TAACGATGAGTATAGATCCAAGTATCTTGGAGCTAAGATGGA-GAAGAAAGG-TGAGAGA 431 || || ||||| |||| | ||| ||||| ||||| | || ||| | || | || | Sbjct 365 CAATGAGGAGTACCGATCTATGTACCTTGGTGCTAA-ACCGACCAAG-AGGGTTTTGA-A 421 Query 432 AGGACTAGCCAACGGTA-CGAGGCTCGTGTCGGTGATGAGCTACCAGAGTCTATTGACTG 490 | || || | ||||| | |||| ||||| ||||| | ||| || || || ||||||| Sbjct 422 A--ACCAGTGATCGGTATC-AGGCGCGTGTTGGTGACGCGCTTCCTGATTCGGTTGACTG 478 Query 491 GAGGAAGA-AAGGAGCCGTGGCTGAGGTCAAAGATCAGGGTAGTTGCGGGAGTTGTTGGG 549 || ||| | |||| ||||| ||||| || |||||||| || || || ||||||||||||| Sbjct 479 GA-GAAAAGAAGGTGCCGTCGCTGATGTTAAAGATCAAGGAAGCTGTGGGAGTTGTTGGG 537 Query 550 CATTCTCAACCACTGGAGCAGTGGAGGGGATTAACCAGATCGTAACCGGAGACTTAATAT 609 |||||||||| | |||||||||||| || || ||| |||| || || ||||| ||||||| Sbjct 538 CATTCTCAACTATTGGAGCAGTGGAAGGAATAAACAAGATTGTGACAGGAGATTTAATAT 597 Query 610 CCTTGTCCGAACAAGAGTTGGTCGATTGTGACACTTCATACAACGAAGGTTGTAACGGAG 669 | ||||| |||||||| ||||| ||||||||||| || || ||| |||| ||||| || | Sbjct 598 CTTTGTCTGAACAAGAATTGGTTGATTGTGACACATCTTATAACCAAGGATGTAATGGTG 657 Query 670 GTCTCATGGACTATGCTTTTGAGTTCATTATCAAGAATGGTGGAATCGATACAGAAAAAG 729 || | ||||||||||| |||||||| |||||||| |||||||| || ||||| ||| | Sbjct 658 GTTTAATGGACTATGCGTTTGAGTTTATTATCAAAAATGGTGGTATTGATACCGAAGCGG 717 Query 730 ATTATCCTTACAAGGGTGTC-GATGGAAC-TTGTGACCAGATCAGGAAAAACGCTAAAGT 787 ||||||||||||||| || | ||||| | ||||||||||| ||||||||| ||||| || Sbjct 718 ATTATCCTTACAAGGCTG-CTGATGG-TCGTTGTGACCAGAACAGGAAAAATGCTAAGGT 775 Query 788 TGTCACAATCGATTCATATGAGGATGTTCCC--ACTTACAGCGAGGAATCGT-TGAAGAA 844 ||| || || ||||||||||| |||| |||| | ||||||||| || | | ||||| Sbjct 776 TGTTACCATTGATTCATATGAAGATG-TCCCTGA-GAACAGCGAGGCGTC-TCTAAAGAA 832 Query 845 AGCAGTT-GCTCATCAACCCGTTAGCGTCGCCATTGAGGCTGGTGGTCGTGCGTTCCAGC 903 ||| || ||||| || || |||| ||||||||||| || |||||||| || ||||||| Sbjct 833 AGC-TTTGGCTCACCAGCCTATTAGTGTCGCCATTGAAGCGGGTGGTCGCGCTTTCCAGC 891 Query 904 TCTATGATTCGGGTATATTTGATGGAAC-TTGTGGAACACAACTAGACCATGGAGTTGTG 962 ||||| ||||||| |||||||||| || |||||| || | ||||||| || |||||| Sbjct 892 TCTATTCTTCGGGTGTATTTGATGG-ACTTTGTGGGACGGAGTTAGACCACGGTGTTGTG 950 Query 963 GCGGTCGGATACGGAACCGAGAACGGCAAA-GACTACTGGATTGTGAGAAACTCATGGGG 1021 || || || || |||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 951 GCTGTGGGTTATGGAACCGAGAACGG-AAAGGACTACTGGATTGTGAGAAACTCATGGGG 1009 Query 1022 TAAA-AGCTGGGGAGAGAGTGGATACTTAAAGATGG-AGCGTAACATCGC-GTCTTCATC 1078 ||| || ||||||||||| |||||| ||||||||| | |||||||| | | | || | Sbjct 1010 -AAACAGATGGGGAGAGAGCGGATACATAAAGATGGCA-CGTAACATTGAAG-CGCCAAC 1066 Query 1079 CGGAAAATGTGGAATCGCGATTGAACCTTCATACCCGATCAAGAATGG-CGAAAACCCGC 1137 ||||| ||||||||||| || || |||| || ||||||||||| || | | ||||| | Sbjct 1067 AGGAAAGTGTGGAATCGCTATGGAGGCTTCGTATCCGATCAAGAAAGGTC-AGAACCCAC 1125 Query 1138 CAAACCCGGGACCTTCACCTCCATCTCCCATCAAGCCTCCAACC-CAATGTGACA-GTTA 1195 ||||||| || || ||||| ||||||||||| ||||| |||||| || ||||||| || | Sbjct 1126 CAAACCCTGGCCCGTCACCACCATCTCCCATTAAGCCACCAACCACA-TGTGACAAGT-A 1183 Query 1196 CTACACTTGTCCAGAGAGCAACACTTGTTGTTGTCTGTTTGAGTATGGAAAGTATTGCTT 1255 || | |||| || ||||||||||||||||||||||| | ||||||| ||||| ||||| Sbjct 1184 CTTCTCTTGCCCTGAGAGCAACACTTGTTGTTGTCTCTACAAGTATGGTAAGTACTGCTT 1243 Query 1256 TGCTTGGGGATGTTGCCCACTAGAAGCTGCCACTTGCTGTGATGACAACT-ATAGTTGCT 1314 | |||||||||||||| || |||||||| |||||||| ||||| |||| | ||||||| Sbjct 1244 CGGATGGGGATGTTGCCCGCTCGAAGCTGCTACTTGCTGCGATGATAACTCA-AGTTGCT 1302 Query 1315 GCCCGCACGAGTACCCGGTTTGTGACCTTGATCAG-GGAACCTGTTT-ATTGAGCAAGAA 1372 | || || |||||||||||||||||| || | | | ||||||||||| || ||||||||| Sbjct 1303 GTCCTCATGAGTACCCGGTTTGTGACGTTAACC-GCGGAACCTGTTTGAT-GAGCAAGAA 1360 Query 1373 CAGTCCATTTAGTGTTAAGGCCTTAAAGCGTAAACCCGCAACGCCATTCTGGTCACAAG- 1431 |||||| ||||| || ||||| |||||||||| |||||||| || |||||| || ||| Sbjct 1361 CAGTCCGTTTAGCGTGAAGGCTTTAAAGCGTACACCCGCAATACCGTTCTGGGCA-AAGA 1419 Query 1432 GCAGAAAGAACATTGCCTAA 1451 |||||||| ||||||| ||| Sbjct 1420 GCAGAAAGCACATTGCGTAA 1439 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82328893800 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5