BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg473938 Length=1709 Score E Sequences producing significant alignments: (Bits) Value AT1G48030.1 | Symbols: mtLPD1 | mitochondrial lipoamide dehydro... 2603 0.0 AT3G17240.1 | Symbols: mtLPD2 | lipoamide dehydrogenase 2 | chr... 1555 0.0 > AT1G48030.1 | Symbols: mtLPD1 | mitochondrial lipoamide dehydrogenase 1 | chr1:17717139-17719141 REVERSE LENGTH=1717 Length=1717 Score = 2603 bits (1409), Expect = 0.0 Identities = 1615/1715 (94%), Gaps = 12/1715 (1%) Strand=Plus/Plus Query 1 ATGGCGATGGCGAGCTTAGCTAGGAGGAAGGCGTACTTTCTCACCAGAAACTTATCCAAC 60 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 1 ATGGCGATGGCGAGTTTAGCTAGGAGGAAGGCGTATTTTCTCACCAGAAACTTATCAAAC 60 Query 61 TCTCCCACTGACGCTCTCAGATTCTCCTTCTCCCTCTCCCGTGGCTTCGCCTCATCAGGA 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 61 TCTCCCACTGACGCTCTCAGATTCTCCTTTTCCCTCTCCCGTGGCTTCGCCTCATCAGGA 120 Query 121 TCTGATGAAAACGACGTCGTCATCATCGGCGGCGGTCCCGGTGGTTACGTAGCCGCGATC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TCTGATGAAAACGACGTCGTCATCATCGGCGGCGGTCCCGGTGGTTACGTAGCCGCGATC 180 Query 181 AAAGCGGCTCAGCTTGGTCTCAAAACCACCTGTATCGAGAAACGCGGCGCTCTCGGTGGT 240 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 181 AAAGCCTCTCAGCTTGGTCTCAAAACCACTTGTATCGAGAAACGCGGCGCTCTCGGTGGT 240 Query 241 ACTTGTCTTAACGTCGGGTGCATTCCTTCGAAGGCTCTTCTTCACTCTTCACATATGTAC 300 |||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct 241 ACTTGTCTCAACGTCGGTTGCATTCCTTCCAAGGCTCTGCTTCACTCTTCACATATGTAC 300 Query 301 CATGAGGCGAAACATGCGTTCGCCAACCATGGTATTAAGGTCTCTTCGGTTGAGGTGGAT 360 ||||||||||| ||| | ||||| ||||||||||||||||||||||| |||||||| ||| Sbjct 301 CATGAGGCGAAGCATTCCTTCGCTAACCATGGTATTAAGGTCTCTTCTGTTGAGGTAGAT 360 Query 361 CTTCCTGCTATGTTAGCTCAGAAAGATAATGCGGTTAAGAACCTTACTCGTGGTATCGAA 420 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || Sbjct 361 CTTCCTGCTATGTTGGCTCAGAAAGATAATGCGGTTAAGAACCTCACTCGTGGTATTGAG 420 Query 421 GGTTTGTTCAAGAAGAATAAGGTGACTTATGTTAAGGGATATGGTAAGTTTATTTCACCA 480 |||||||||||||| ||||||||||||||||| || |||||||||||||||||||| ||| Sbjct 421 GGTTTGTTCAAGAAAAATAAGGTGACTTATGTCAAAGGATATGGTAAGTTTATTTCCCCA 480 Query 481 AATGAAGTCTCGGTGGAGACGATCGATGGAGGGAACACCGTTGTGAAAGGTAAACACATC 540 |||||||||||||||||||| || |||||||| ||||| |||||||||||||||| ||| Sbjct 481 AATGAAGTCTCGGTGGAGACTATTGATGGAGGAAACACTATTGTGAAAGGTAAACATATC 540 Query 541 ATTGTTGCTACTGGCTCGGATGTTAAGTCTTTGCCTGGTATTACGATTGATGAAAAGAAG 600 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 541 ATTGTTGCTACTGGCTCGGATGTTAAGTCCTTGCCTGGTATTACGATTGATGAAAAGAAG 600 Query 601 ATTGTTTCGTCGACTGGAGCGTTGTCTCTGTCGGAAGTCCCGAAGAAATTGATTGTGATT 660 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct 601 ATTGTTTCGTCGACTGGAGCGTTGTCTCTATCGGAAGTTCCGAAGAAATTGATTGTTATT 660 Query 661 GGTGCGGGGTATATTGGGCTTGAGATGGGTTCTGTTTGGGGTAGGCTTGGGGCAGAGGTT 720 |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 661 GGTGCGGGGTATATTGGGCTTGAGATGGGTTCTGTTTGGGGTAGGCTTGGATCTGAGGTT 720 Query 721 ACGGTAGTTGAGTTTGCTGGGGATATCGTTCCTTCGATGGATGGTGAAATCCGTAAGCAG 780 ||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct 721 ACGGTTGTTGAGTTTGCTGGAGATATTGTTCCTTCGATGGATGGTGAAATTCGTAAGCAG 780 Query 781 TTTCAACGTTCACTTGAGAAGCAAAAGATGAAGTTCATGCTCAAGACTAAAGTTGTATCT 840 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 781 TTTCAACGTTCTCTTGAGAAGCAGAAGATGAAGTTCATGCTCAAGACTAAAGTTGTTTCT 840 Query 841 GTGGATTCCTCCTCTGACGGTGTGAAGCTTACAGTGGAACCGGCAGAAGGAGGAGAGCAG 900 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 841 GTGGATTCCTCCTCTGATGGTGTGAAGCTTACAGTGGAACCGGCAGAAGGAGGAGAGCAG 900 Query 901 ACTATTCTGGAAGCCGATGTTGTGCTTGTCTCAGCAGGAAGAACACCGTTCACATCTGGA 960 ||||||||||||| ||||| || ||||||||||| ||||||||||||||||| |||||| Sbjct 901 TCTATTCTGGAAGCTGATGTGGTACTTGTCTCAGCGGGAAGAACACCGTTCACTTCTGGA 960 Query 961 CTTGATCTGGAGAAAATCGGAGTAGAAACTGACAAAGCTGGGAGGATTCTGGTGAATGAG 1020 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 961 CTTGATCTGGAGAAAATCGGAGTGGAAACTGACAAAGCCGGGAGGATTCTGGTGAATGAT 1020 Query 1021 AGATTCTTGAGCAATGTCCCAGGCGTGTATGCTATTGGAGATGTGATTCCAGGACCAATG 1080 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 AGATTCTTGAGTAATGTCCCAGGCGTGTATGCTATTGGAGATGTGATTCCAGGACCAATG 1080 Query 1081 CTTGCTCACAAAGCCGAAGAAGATGGTGTTGCTTGTGTGGAGTTCATAGCAGGCAAACAC 1140 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1081 CTTGCTCACAAAGCCGAAGAAGACGGTGTTGCTTGTGTGGAGTTCATAGCAGGCAAACAC 1140 Query 1141 GGCCATGTGGATTATGACAAGGTTCCTGGTGTTGTCTACACGCATCCTGAGGTTGCTTCG 1200 || ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 1141 GGTCATGTTGATTATGACAAGGTTCCTGGTGTTGTTTACACTCATCCTGAGGTTGCTTCG 1200 Query 1201 GTTGGTAAAACCGAAGAACAGCTGAAGAAAGAAGGTGTGAGTTACCGGGCTGGAAAATTC 1260 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 1201 GTTGGTAAAACCGAAGAACAGCTGAAGAAAGAAGGTGTGAGTTACCGGGTTGGGAAATTC 1260 Query 1261 CCATTTATGGCAAATAGCAGAGCGAAGGCCATTGATAATGCAGAAGGATTGGTTAAGATT 1320 || |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 1261 CCGTTTATGGCGAATAGCAGAGCTAAGGCTATTGATAATGCAGAAGGATTGGTTAAGATT 1320 Query 1321 CTGGCTGATAAGGAGACCGATAAGATCTTGGGCGTTCACATTATGTCTCCAAACGCTGGA 1380 ||||| ||||||||||| ||||||||||||||||||||||||||| | |||||||||||| Sbjct 1321 CTGGCCGATAAGGAGACTGATAAGATCTTGGGCGTTCACATTATGGCGCCAAACGCTGGA 1380 Query 1381 GAGCTGATTCATGAGGCGGTTCTTGCGATTAACTACGATGCATCAAGTGAAGACATTGCT 1440 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1381 GAGCTGATTCATGAGGCTGTTCTTGCGATTAACTACGATGCATCAAGTGAAGACATTGCT 1440 Query 1441 CGAGTCTGTCACGCTCATCCCACTATGAGCGAGGCTCTGAAGGAAGCCGCCATGGCCACA 1500 |||||||| || |||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 1441 CGAGTCTGCCATGCTCATCCCACTATGAGCGAGGCTCTTAAGGAAGCTGCCATGGCCACC 1500 Query 1501 TATGACAAGCCCATTCACATCTAAA-GGGAA---G-AAGACCTTAAAGGAGAGAGCCACC 1555 ||||||||||| ||||||||||||| ||||| | ||||||||||||||| |||||||| Sbjct 1501 TATGACAAGCCTATTCACATCTAAAAGGGAACAAGGAAGACCTTAAAGGAGTGAGCCACC 1560 Query 1556 TACGACAAGCCAAATCGATATCTTAAACGGGTTGGATTTTGGTTTGGTTTTCTGTGGTTT 1615 || ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| Sbjct 1561 TATGACAAGCCAAATCGATATCTTAACCTGGTTGGATTTTGGTTCGGTTTTCTGTGGTTT 1620 Query 1616 AGCCTTCAATTTGTCCTTTATTACTAGTAGTGTTC-TTCAT-A-TGTTCAGATTCGTGTT 1672 ||||||||||||||||||||| ||| || || || ||| | | ||||||||| |||||| Sbjct 1621 AGCCTTCAATTTGTCCTTTAT-ACT-GT-GTTTTTATTCGTTAATGTTCAGATACGTGTT 1677 Query 1673 AAGCCTGATCCTTAATAAA-TATTCAACATTCACT 1706 |||||||||| |||||||| ||||||||||||||| Sbjct 1678 AAGCCTGATCTTTAATAAAATATTCAACATTCACT 1712 > AT3G17240.1 | Symbols: mtLPD2 | lipoamide dehydrogenase 2 | chr3:5889872-5892252 REVERSE LENGTH=1919 Length=1919 Score = 1555 bits (842), Expect = 0.0 Identities = 1312/1540 (85%), Gaps = 27/1540 (2%) Strand=Plus/Plus Query 1 ATGGCGATGGCGAGCTTAGCTAGGAGGAAGGCGTACTTTCTCACCAGAAACTTATCCAAC 60 |||||||||||||||||||||||||| || ||||||||||||||||||||| | || || Sbjct 87 ATGGCGATGGCGAGCTTAGCTAGGAGAAAAGCGTACTTTCTCACCAGAAACATCTCTAAT 146 Query 61 TCTCCCACTGACGCTCTCAGATTCTCCTTCTCCCTCTCCCGTGGCTTCGCCTCATCAGGA 120 ||||||||||| ||| |||||||||| ||||||||| | || |||||||| || |||||| Sbjct 147 TCTCCCACTGATGCTTTCAGATTCTCTTTCTCCCTCACTCGCGGCTTCGCTTCGTCAGGA 206 Query 121 TCTGATGAAAACGACGTCGTCATCATCGGCGGCGGTCCCGGTGGTTACGTAGCCGCGATC 180 || || || ||||||||||||||||||||||||||||| || ||||| || || ||||| Sbjct 207 TCCGACGACAACGACGTCGTCATCATCGGCGGCGGTCCTGGAGGTTATGTGGCGGCGATT 266 Query 181 AAAGCGGCTCAGCTTGGTCTCAAAACCACCTGTATCGAGAAA-CGCGGCGCTCTCGGTGG 239 |||||||| ||||| ||||| || || ||||||||||| ||| || |||||||||||||| Sbjct 267 AAAGCGGCACAGCTCGGTCTTAAGACTACCTGTATCGA-AAAGCGAGGCGCTCTCGGTGG 325 Query 240 TACTTGTCTTAACGTCGGGTGCATTCCTTCGAAGGCTCTTCTTCACTCTTCACATATGTA 299 |||||||||||||||||| || |||||||| ||||| |||||||||||||| || ||||| Sbjct 326 TACTTGTCTTAACGTCGGCTGTATTCCTTCAAAGGCCCTTCTTCACTCTTCTCACATGTA 385 Query 300 CCATGAGGCGAAA-CATGCGTTCGCCAACCATGGTATTAAGGTCTCTTCGGTTGAGGTGG 358 |||||| || ||| || | || || ||||||||| |||||||||||||||||||||| | Sbjct 386 CCATGAAGC-AAAGCACGTTTTTGCTAACCATGGTGTTAAGGTCTCTTCGGTTGAGGTAG 444 Query 359 ATCTTCCTGCTATGTTAGCTCAGAAAGATA-ATGCGGTTAAGAACCTT-ACTCGTGGTA- 415 |||||||||||||||| || |||||||| | | || || ||||| || || ||||| | Sbjct 445 ATCTTCCTGCTATGTTGGCGCAGAAAGACACA-GCCGTCAAGAA-TTTAACCCGTGG-AG 501 Query 416 TCGAAGGTTTGTTCAAGAAGAATAAGGT-GACTTATGTTAAGGGATATGGTAAGTTTATT 474 |||||||| ||||||||||||| ||||| || ||||||||||| |||||||||||| | Sbjct 502 TCGAAGGTCTGTTCAAGAAGAACAAGGTAAAC-TATGTTAAGGGCTATGGTAAGTTTCTG 560 Query 475 TCACCAAATGAAGTCTCGGTGGAGACGATCGATGGAGGGAACACCGTTGTGAAAGGTAAA 534 || ||| |||||||| ||||| || |||||||||| ||| ||||||||||| ||| Sbjct 561 TCCCCATCGGAAGTCTCTGTGGACACAATCGATGGAGAAAACGTGGTTGTGAAAGGCAAA 620 Query 535 CACATCATTGTTGCTACTGGCTCGGATGTTAAGTCTTTGCCTGGTATTACGATTGATGAA 594 || ||||| ||||| |||||||||||||| |||||||||||||| || || || |||||| Sbjct 621 CATATCATAGTTGCAACTGGCTCGGATGTCAAGTCTTTGCCTGGAATCACCATCGATGAA 680 Query 595 AAGAAGATTGTTTCGTCGACTGGAGCGTTGTCTCTGTCGGAAG-TCCCGAAGAAATTGAT 653 ||||||||||| || || || || || |||||||| | | || |||| |||||| | || Sbjct 681 AAGAAGATTGTCTCATCAACCGGGGCACTGTCTCTGACAG-AGATCCCAAAGAAACTCAT 739 Query 654 TGTGATTGGTGCGGGGTATATTGGGCTTGAGATGGGTTCTGTTTGGGGTA-GGCTTGGGG 712 ||| |||||||| || ||||||||||| |||||||||||||| ||||| | |||| || Sbjct 740 TGTCATTGGTGCTGGCTATATTGGGCTAGAGATGGGTTCTGTATGGGG-ACGGCTAGGAT 798 Query 713 CAGAGGTTACGGTAGTTGAGTTTGCTGGGGATATCGTTCCTTCGATGGATGGTGAAATCC 772 ||||||| || || ||||||||||| | ||||||||| || | |||||||||||||||| Sbjct 799 CAGAGGTCACAGTTGTTGAGTTTGCAGCGGATATCGTACCAGCAATGGATGGTGAAATCC 858 Query 773 GTAAGCAGTTTCAACGTTCACTTGAGAAGCAAAAGATGAAGTTCATGCTCAAGACTAAAG 832 | |||||||||||||| ||||| |||||||| |||||||| || |||||||| ||||||| Sbjct 859 GCAAGCAGTTTCAACGCTCACTAGAGAAGCAGAAGATGAAATTTATGCTCAAAACTAAAG 918 Query 833 TTGTAT-CTGTGGATTCCTCCT-CTGACGGTGTGAAGCTTACAGTGGAACCGGCAGAAGG 890 | || | || ||||| | || || ||||| || || | ||||||||| || ||||| Sbjct 919 TCGT-TGGGGTAGATTCAT-CTGGAGATGGTGTTAAACTCATAGTGGAACCTGCTGAAGG 976 Query 891 AGGAGAGCAGACTATTCTGGAAGCCGATGTTGTGCTTGTCTCAGCAGGAAGAACACCGTT 950 ||||| ||||| | ||| ||||| ||||| || || |||||||| || ||||| ||||| Sbjct 977 TGGAGAACAGACCACTCTAGAAGCTGATGTGGTCCTCGTCTCAGCTGGTAGAACTCCGTT 1036 Query 951 CACATCTGGACTTGATCTGGAGAAAATCGGAGTAGAAACTGACAAA-GCTGGGAGGATTC 1009 |||||||||||||||||| |||||||||||||| || || |||||| || ||||| |||| Sbjct 1037 CACATCTGGACTTGATCTAGAGAAAATCGGAGTTGAGACAGACAAAGGC-GGGAGAATTC 1095 Query 1010 TGGTGAATGAGAGATTCTTGAGC-AATGTCCCAGGCGTGTATGCTATTGGAGATGTGATT 1068 ||||||| |||||||||| || | ||||| ||||||| ||||| ||||||||||||||| Sbjct 1096 TGGTGAACGAGAGATTCTCGA-CAAATGTTTCAGGCGTTTATGCAATTGGAGATGTGATT 1154 Query 1069 CCAGGACCAATGCTTGCTCACAAAGCCGAAGAAGATGGTGTTGCTTGTGTGGAGTTCATA 1128 |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct 1155 CCAGGACCAATGCTGGCTCACAAAGCCGAAGAAGATGGTGTTGCATGTGTTGAGTTTATA 1214 Query 1129 GCAGGCAAACACGGCCATGTGGATTATGACAAGGTTCCTGGTGTTGTCTACACGCATCCT 1188 |||||||||||||| ||||||||||| ||||| || ||||| |||||||||||| | ||| Sbjct 1215 GCAGGCAAACACGGGCATGTGGATTACGACAAAGTCCCTGGGGTTGTCTACACGTACCCT 1274 Query 1189 GAGGTTGCTTCGGTTGGTAAAACCGAAGAACAGCTGAAGAAAGAAGGTGTGAGTTACCGG 1248 || ||||| ||||||||||||||||| || |||||||||||||||||||| || ||| Sbjct 1275 GAAGTTGCGTCGGTTGGTAAAACCGAGGAGCAGCTGAAGAAAGAAGGTGTAAGCTACAAT 1334 Query 1249 GCTGGAAAATTCCCATTTATGGCAAATAGCAGAGCGAAGGCCATTGATA-ATGCAGAAGG 1307 | ||||||||||||||| ||||| ||||||||||| |||||||| || | | ||||| || Sbjct 1335 GTTGGAAAATTCCCATTCATGGCCAATAGCAGAGCCAAGGCCATAGACACA-GCAGAGGG 1393 Query 1308 ATTGGTTAAGATTCTGGCTGATAAGGAGACCGATAAGATCTTGGGCGTTCACATTATGTC 1367 | |||| |||||| |||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct 1394 AATGGTCAAGATTTTGGCTGATAAAGAGACAGACAAGATCTTGGGAGTTCACATTATGTC 1453 Query 1368 TCCAAACGCTGGAGAGCTGATTCATGAGGCGGTTCTTGCGATTAACTACGATGCATCAAG 1427 |||||||| ||||| |||| |||||||||||||| || || ||||| ||||||||||| Sbjct 1454 ACCAAACGCAGGAGAATTGATCCATGAGGCGGTTCTAGCTATCAACTATGATGCATCAAG 1513 Query 1428 TGAAGACATTGCTCGAGTCTGTCACGCTCATCCCACTATGAGCGAGGCTCTGAAGGAAGC 1487 |||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||| Sbjct 1514 TGAAGACATTGCTCGAGTCTGTCACGCTCATCCCACCATGAGTGAGGCTATCAAGGAAGC 1573 Query 1488 CGCCATGGCCACATATGACAAGCCCATTCACATCTA-AAG 1526 |||||||| || |||||||||||||||||||| || ||| Sbjct 1574 TGCCATGGCTACCTATGACAAGCCCATTCACATGTAGAAG 1613 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84487517235 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5