BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg474021
Length=2402
Score E
Sequences producing significant alignments: (Bits) Value
AT1G48840.1 | Symbols: | Plant protein of unknown function (DU... 3489 0.0
AT3G18350.1 | Symbols: | Plant protein of unknown function (DU... 1690 0.0
AT1G48850.1 | Symbols: EMB1144 | chorismate synthase, putative ... 91.6 3e-17
> AT1G48840.1 | Symbols: | Plant protein of unknown function (DUF639)
| chr1:18061521-18065031 FORWARD LENGTH=2473
Length=2473
Score = 3489 bits (1889), Expect = 0.0
Identities = 2146/2270 (95%), Gaps = 17/2270 (1%)
Strand=Plus/Plus
Query 1 ACACCGGAGAGATCCTTATTACCACCGTCTCACTTTCTCCGCTTCTCTTGTTTGTCACTT 60
||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1 ACACCGGAGAGATCC---TT---ACCGTCTCACTTTCTCCGCTTCTCTTGTTTGTCACTT 54
Query 61 TTCGATAAACCCCAATTCACGGCAGAATCTTGATAATTGGAGAAAACG-AAGCTTTTATG 119
|||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 55 TTCGTTAAACCCCAATTCACGGCAGAATCTTGATAATTGGAGAAAACGAAAGCGTTTATG 114
Query 120 GTGTTGTAGGAGAACAATTCATAGTTGTGAAGTTAGTTGATTTTGATTCAAGGTGAAGAA 179
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 115 GTGTTGTGGGAGAACAATTCATAGTTGTGAAGTTAGTTG-----GATTCAAGGTGAAGAA 169
Query 180 ATCTAACTATGTCGAGCAGAACTCGGGATGTTTTAGAAGGTCTGGTTAAAGATAGTTCAC 239
|||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct 170 ATCTAAGTATGTCGAGCAGAACTATGGATGTTCTAGAAGGTCTGGTTAAAGATAGTTCAC 229
Query 240 TTAAATGGTTGCTTGGGAAGCAAAGTTCTTTCGATGAAGAAATCGAGGAGATTGAGAATT 299
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 230 TTAAATGGTTGCTTGGGAAGCAAAGTTCTTTTGATGAAGAAATCGAAGAGATTGAGAATT 289
Query 300 CTCCATCTGCTGGTGCCAACTGGATACCTGAGCTTTCTCCAGTGGCAAATGTTGTCATTC 359
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct 290 CTCCATCTGCTGGTGCCAATTGGATACCTGAGCTTTCTCCAGTAGCAAATGTTGTTATTC 349
Query 360 GCAGGTGTTCAAAAATACTTGGTGTTTCAGTAAGTGAGCTACAAGATAGTTTCAAACAAG 419
||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 350 GCAGGTGTTCAAAGATACTTGGTGTTGCAGTAAGTGAGCTACAAGATAGTTTCAAACAGG 409
Query 420 AGGCGTCTGAATCTGTTAAGCAGCCTTCAATGTTTCCAAGAAACTTTCTAGAGTACTGCT 479
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 AGGCGTCTGAGTCTGTTAAGCAGCCTTCAATGTTTCCAAGAAACTTTCTAGAGTACTGCT 469
Query 480 GTTTCAGGGCACTTGCACTCTCTGTTGGAGTAACAGGTCATCTAAGCGATAAAAACTTTC 539
||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||
Sbjct 470 GTTTCAGGGCACTTGCACTGTCTGTTGGAGTAACAGGTCATTTAAGTGATAAAAGTTTTC 529
Query 540 GACGTTTAACTTTTGATATGATGGTTGCTTGGGAGGTTCCTTCCGCTGCTAGCCAGTCAT 599
||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||
Sbjct 530 GACGTTTAACTTTTGATATGATGGTCGCTTGGGAGGTGCCTTCCGCTGCTAGCCAGACAT 589
Query 600 TACTCAGTGTTGATGAAGATCCAACCGTTGGTTTAGAAGCCTTCTCACGGATTGCTCCAG 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 TACTCAGTGTTGATGAAGATCCAACCGTTGGTTTAGAAGCCTTCTCACGGATTGCTCCAG 649
Query 660 CAGTTCCTATAATTGCTGATGTGATCATATGTGAGAATTTGTTTGGGATGCTGACTTCTG 719
||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 650 CAGTTCCGATAATAGCTGATGTGATCATATGTGAGAATTTGTTTGGGATACTGACTTCCG 709
Query 720 CCTCAAACAGTGTTCGGCTTCAGTTTTATGTTTATGACAAGTATTTGTATGGACTTGAAA 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 710 TCTCAAACAGTGTTCGGCTTCAGTTTTATGTTTATGACAAGTATTTGTATGGACTTGAAA 769
Query 780 GAGCAATAAAGAAGATGAAGAACCAGTCCGAGTCATCTTTACTTTCCGGTGTTCGATCAA 839
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 770 GAGCAATAAAGAAGATGAAGAGCCAGTCCGAGTCATCTTTACTTTCTGGTGTTCGATCAA 829
Query 840 AAGGAGAAAAGATTCTTGAGGTCGACGGGACAGTTACTACCCAACCAGTTCTTGAACATA 899
|||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||
Sbjct 830 AAGGAGAAAAGATTCTTGAGCTCGATGGTACAGTTACTACCCAACCAGTTCTTGAACATA 889
Query 900 TTGGAATCTCTACATGGCCAGGTCGCTTGATTCTGACTGATCATTCACTCTATTTTGAGG 959
||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 890 TTGGAATATCTACATGGCCAGGTCGCTTGATTCTTACTGATCATTCACTATATTTTGAGG 949
Query 960 CTATAAAGGTTGTTTCGTTCGACACACCAAAGCGTTATAGCCTCTCTGAAGATCTGAAAC 1019
||||||||||||| || |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 950 CTATAAAGGTTGTATCCTTCGACACACCAAAGCGTTATAGCCTATCTGATGATCTGAAAC 1009
Query 1020 AAGTCATTAAACCTGAGTTAACCGGTCCTTGGGGCACTCGGCTGTTCGATAAGGCTGTTT 1079
||||||||||||| |||||||||||||||||||| |||||||| || |||||||| || |
Sbjct 1010 AAGTCATTAAACCCGAGTTAACCGGTCCTTGGGGGACTCGGCTTTTTGATAAGGCCGTCT 1069
Query 1080 CTTACAAGTCTATTTCCCTACCAGAACCAGTAGTAATGGAGTTCCCCGAGCTCAAGGGCC 1139
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct 1070 CTTACAAGTCTATTTCCCTACCAGAACCAGTAGTAATGGAGTTCCCTGAGCTTAAGGGTC 1129
Query 1140 ACACAAGACGAGATTACTGGCTCGCAATAATCCTAGAAGTGTTATATGTTCACAGATACA 1199
||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1130 ACACACGAAGAGATTACTGGCTCGCGATAATCCTAGAAGTGTTATATGTTCACAGATACA 1189
Query 1200 TAAAGAAGTTCAAGATCAACACGAGTGTGGCGAAAGATGAAGCTATCTCAAAAGCTGTAC 1259
||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| |
Sbjct 1190 TAAAGAAGTTCAAGATC-A-AC-AGTGTGGCGAAAGATGAAGCTATCTCAAAAGCTGTCC 1246
Query 1260 TCGGCATTTTACGCGTGCAAGCCATTCAAGAACTCGGTTTAACAAACCCTGTGCGGTATG 1319
||||||| ||||||||||| |||||||||||| | ||||| |||||||||||||| || |
Sbjct 1247 TCGGCATATTACGCGTGCAGGCCATTCAAGAAGTTGGTTTGACAAACCCTGTGCGTTACG 1306
Query 1320 GGAATCTTCTCCCGTTCAATCTCTGTGATCAGCTTCCTGGTGGAGACCGTATTCTGGAGA 1379
||||||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct 1307 AGAATCTTCTTCCGTTCAATCTCTGCGATCAGCTTCCTGGTGGAGATCGTATACTGGAGA 1366
Query 1380 CGCTTGCAGAGATGTCTACTTCTAGAGTGCTTGACCGGACAAACAAAGCCAAAGAAGGGA 1439
|||||||||||||||| | ||||||||| |||||||| || |||||||||||||||||
Sbjct 1367 CGCTTGCAGAGATGTCGAGTTCTAGAGTACTTGACCGAACTGCCAAAGCCAAAGAAGGGA 1426
Query 1440 CATTGCACTCGATCTCGGCCTCGGATATGGTTTCGCAATTGGGTTTGGTGTTTGGAGCAA 1499
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1427 CATTGCACTCGATCTCGGCCTCGGATATGGTTTCGCAGTTGGGTTTGGTGTTTGGAGCAA 1486
Query 1500 CAAGTCCAAAGAGTAGAAGTAGTCTTGTGGTAGGTGAGGTGATGGTTGGAGATGTGAATC 1559
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1487 CAAGTCCAAAGAGTAGAAGTAGTCTAGTGGTAGGTGAGGTGATGGTTGGAGATGTGAATC 1546
Query 1560 CATTGGAGAAAGCAGTTAAGCAATCAAGAAAGAACTATGAGAAAGTGGTTCTTGCACAAG 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1547 CATTGGAGAAAGCAGTTAAGCAATCAAGAAAGAACTATGAGAAAGTGGTTCTTGCGCAAG 1606
Query 1620 AGACGGTTAATGGAGTTAAAGTTGATGGAATTGACACCAATGTAGCAGTGATGAAGGAAC 1679
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1607 AGACTGTTAATGGAGTTAAAGTTGATGGAATTGACACCAATGTAGCAGTGATGAAGGAAC 1666
Query 1680 TGCTACTTCCGGTTATAGAAATCGGGAATTGGCTTTTGTCGTTAGCT-TATTGGGAGGAT 1738
| |||||||||| || |||||| ||||||||||||||||| |||| | |||||||| |||
Sbjct 1667 TACTACTTCCGGCTACAGAAATAGGGAATTGGCTTTTGTCATTAG-TATATTGGGAAGAT 1725
Query 1739 CCATTGAAGTCTTTTGTTTTCTGTCTCTTCTCAACTTTCATAATTTACAGGGGGTGGATT 1798
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1726 CCATTGAAGTCTTTTGTTTTCTGTCTCTTGTCCACTTTCATAATTTACAGGGGGTGGATT 1785
Query 1799 GGCTATGTTTTTGCGATTGCGTCTCTCTTTATAGCGGGTTTCATGGTTCTCACGAGATAT 1858
||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1786 GGCTATGTTTTCGCGATTGCAACTCTCTTTATAGCGGGTTTCATGGTTCTAACGAGATAT 1845
Query 1859 TTCAGCAATAGAGAGAAAGTAATGATCGAGCTGAAAGTTATAGCGCCGCCTCCTATGAAC 1918
|||||||||||||||||||||||||||||||||||||| || || |||||||||||||||
Sbjct 1846 TTCAGCAATAGAGAGAAAGTAATGATCGAGCTGAAAGTCATGGCACCGCCTCCTATGAAC 1905
Query 1919 ACAATGGAACAGCTTTTAGCAGTCCAAAACGCGATTTCACAGCTCGAACAGTTAATCCAA 1978
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1906 ACAATGGAACAGCTTTTAGCGGTCCAAAACGCCATTTCACAGCTCGAACAGTTAATCCAA 1965
Query 1979 GACGCAAACATTGTTCTCCTCAAGTTCCGAGCTTTACTACTCTCTCTTTTCCCACAGGCG 2038
|||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||
Sbjct 1966 GACGCAAACATTGTTCTCCTCAAGTTCCGAGCTTTATTACTTTCGCTTTTCCCACAGGCG 2025
Query 2039 AGTGAGAAGTTTGCGGTTGCGATTGTGATCGCTGCGTCGATGATGGCATTAGTGCCTTGG 2098
||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 2026 AGTGAGAAGTTTGCGGTTGCGATTGTGATCGCTGCAACGATGATGGCATTGGTGCCTTGG 2085
Query 2099 AACAATCTGATTCTGGTGGTGTTTCTTGAGCTGTTCACAAGATACTCGCCACCGCGTAGA 2158
||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||
Sbjct 2086 AACAATCTGATTCTGGTGGTGTTTCTTGAACTGTTCACAAGATACTCACCACCACGAAGA 2145
Query 2159 GCAAGCACGGAACGGTTGATGCGGCGGCTTAAAGAGTGGTGGTTCAGCATTCCGGCTGCT 2218
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2146 GCAAGCACGGAACGGTTGATGCGGCGGCTTAAAGAGTGGTGGTTTAGCATTCCGGCTGCT 2205
Query 2219 CCGGTTGTTCTTGAACAGAGCAAAGACGATAACAAGAAAACCAAGTAAAA 2268
||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2206 CCGGTCCTTCTTGAACAGAGCAAAGACGATAACAAGAAAACCAAGTAAAA 2255
Score = 91.6 bits (49), Expect = 3e-17
Identities = 96/117 (82%), Gaps = 10/117 (9%)
Strand=Plus/Plus
Query 2291 TACATTTA-CATGTATGTTGTACAAAAGTTTTTGAATTATTACTATAGAATAAAGTT-T- 2347
||||| || ||||||||||||| |||||| |||| || |||| | || ||| || |
Sbjct 2353 TACATGTATCATGTATGTTGTAGAAAAGTGTTTG-GTT-TTAC-A-CCAAAAAAATTATA 2408
Query 2348 --AAATAGTTTATGTTCCGTGGTAAAATCACATTTAGCTGAATGATGCAGTAGCAAA 2402
|||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct 2409 GAAAATAGTTTATGTT-CGTGGTAAAATCACATTTAGCTGAATGATATAGAAGCAAA 2464
> AT3G18350.1 | Symbols: | Plant protein of unknown function (DUF639)
| chr3:6296850-6300673 FORWARD LENGTH=2575
Length=2575
Score = 1690 bits (915), Expect = 0.0
Identities = 1733/2118 (82%), Gaps = 96/2118 (5%)
Strand=Plus/Plus
Query 187 TATGTCGAGCAGAACTCGGGATGT-TTTAGAAGGTCTGGTTAAAGATAGTTCACTTAAAT 245
||||||||||| ||| ||| || | || |||||| |||||| ||||| ||| ||||||
Sbjct 323 TATGTCGAGCAAAACCCGGAATATGCTT-GAAGGTTTGGTTAGAGATACTTCTTTTAAAT 381
Query 246 GGTTGCTTGGGAAGCAAAGTTCTTTCGATGAAGAAATCGAGGAGATTGAGAA-TTCTCCA 304
||||||| ||||| ||||||||||||||||||||||||||||| | || ||| ||||||
Sbjct 382 GGTTGCTCGGGAAACAAAGTTCTTTCGATGAAGAAATCGAGGA-AATGGGAAGATCTCCA 440
Query 305 TCTGCTGGTG-CCAACTGGATACCTGAGCTTTCTCC-AGTGGCAAATGTTGTCATTCGCA 362
|| ||||| | | || |||||||||||||||||||| | | || ||||| || | ||||
Sbjct 441 TCAGCTGG-GACTAATTGGATACCTGAGCTTTCTCCTA-TTGCCAATGTGGTTGTCCGCA 498
Query 363 GGTGTTCAAAAATACTTGGTGTTTCAGTAAGTGAGCTACAAGATAGTTTCAAACAAGAGG 422
|||||||||||||||| |||||||| | || ||||||| ||||||||||||||||||||
Sbjct 499 GGTGTTCAAAAATACTCGGTGTTTCTGCAAACGAGCTACGAGATAGTTTCAAACAAGAGG 558
Query 423 CGTCTGAATCTGTTAAGCAGCCTTCAATGTTTCCAAGAAACTTTCTAGAGTACTGCTGTT 482
| | ||||||| | ||||||||||| | |||||||| ||||||||||||||||| ||||
Sbjct 559 CATTTGAATCTCTCAAGCAGCCTTCTCTATTTCCAAGGAACTTTCTAGAGTACTGTTGTT 618
Query 483 TCAGGGCACTTGCACTCTCTGTTGGAGTAACAGGTCATCTAAG-CGATAAAAACTTTCGA 541
|||| |||||| |||| ||||||||||||||||||||||| || ||||||||| |||||
Sbjct 619 TCAGAGCACTTTCACTGTCTGTTGGAGTAACAGGTCATCT-AGCCGATAAAAAGTTTCGG 677
Query 542 CGTTTAACTTTTGATATGATGGTTGCT-TGGGAGGTTCCTTCCGCTGCTAGCCAGTCATT 600
|| ||||| ||||| |||||||||| | ||||| || || | | |||||||||| | ||
Sbjct 678 CGCTTAACATTTGACATGATGGTTG-TCTGGGAAGTCCCAGCTGTTGCTAGCCAGGCTTT 736
Query 601 ACTCAGTGTTGATGAAGATCCAACCGTTG-GTTTAGAAGCCTTCTCACGGATTGCTCCAG 659
||||||||| || |||||| |||| | || |||||||||||||||||||||| || ||||
Sbjct 737 ACTCAGTGTAGAAGAAGATGCAACAG-TGAGTTTAGAAGCCTTCTCACGGATCGCACCAG 795
Query 660 CAGTTCCTATAATTGCTGATGTGATCATATGTGAGAATTTGTTTGGGATGCTGACTTCTG 719
||||||| ||||| ||||||||||| |||||||| ||| ||||| ||||| || | |
Sbjct 796 CAGTTCCAATAATAGCTGATGTGATTATATGTGATAATCTGTTTCAAATGCTTAC-T-T- 852
Query 720 CCTCAAAC-AGTGTTCGGCTTCAGTTTTATGTTTATGACAAGTATTTGTATGGACTTGAA 778
| || ||| ||| |||||||||||| | |||||||||||||||||| |||| || ||
Sbjct 853 CATC-AACGGGTGGTCGGCTTCAGTTCTCTGTTTATGACAAGTATTTACATGGCCTGGAG 911
Query 779 AGAGCAATAAAGAAGATGAAGAAC-CAGTCCGAGTCATCTTTACTTTCCGGTGTTCGATC 837
|||||||||||||||||| || || |||||||| |||||||| ||||| |||||||||||
Sbjct 912 AGAGCAATAAAGAAGATG-AGGACTCAGTCCGAATCATCTTTGCTTTCTGGTGTTCGATC 970
Query 838 AAAAGGAGAAAAGATTCTTGAGGTCGACGGGACAGTTACTACCCAACCAGTTCTTGAACA 897
|||| ||||||||||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 971 AAAAAGAGAAAAGATTCTGGAAATAGACGGGACAGTTACTACCCAACCAGTTCTTGAACA 1030
Query 898 TATTGGAATCTCTACATGGCCAGGTCGCTTGATTCTGACTGATCATTCACTCTATTTTGA 957
| | ||||| || || |||||||||||||| || ||||| || ||||| || ||||||||
Sbjct 1031 TGTCGGAATATCAACGTGGCCAGGTCGCTTAATCCTGACAGACCATTCCCTATATTTTGA 1090
Query 958 GGC-TATAAAGGTTGTTTCGT-TCGACACACCAAAGCGTTAT-AGCCTCTCTGAAGATCT 1014
||| | ||||||| || || | | |||||||||||||| ||| | ||| |||||||||||
Sbjct 1091 GGCCT-TAAAGGTCGTGTCTTAT-GACACACCAAAGCGATATCA-CCTATCTGAAGATCT 1147
Query 1015 GAAA-CAAGTCATTAAACCTGAGTTAACCGGTCCTTGGGGCACTCGGCTGTTCGATAAGG 1073
||| ||| | ||||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct 1148 -AAAGCAAATAATTAAACCTGAGTTAACTGGTCCTTGGGGCACTCGGCTTTTCGACAAGG 1206
Query 1074 CTGTTTCTTACAAGTCTATTTCCCTACCAGAACCAGTAGTAATGGAGTTCCCCGAGCTCA 1133
| ||||||||| ||||||| || ||| |||||||||| |||||||| ||||| ||||| |
Sbjct 1207 CCGTTTCTTACCAGTCTATATCTCTATCAGAACCAGTGGTAATGGAATTCCCAGAGCTTA 1266
Query 1134 AGGGCCACACAAGACGAGATTACTGGCTCGCAATAATCCTAGAAGTGTTATATGTTCACA 1193
| ||||||||| | || |||||||||||| | || || | ||| || ||||||||||| |
Sbjct 1267 AAGGCCACACACGCCGTGATTACTGGCTCACTATTATACAAGAGGTATTATATGTTCATA 1326
Query 1194 GATACATAAAGAAGTTCAAGATCAACACGAGTGTGGCGAA-AGATGAAGCTA-TCTCAAA 1251
|||||||||| |||| |||||||| | || || |||| || ||| ||||| | | |||||
Sbjct 1327 GATACATAAACAAGTACAAGATCA-C-CG-GTTTGGC-AAGAGACGAAGC-ACTTTCAAA 1381
Query 1252 AGCTGTACTCGGCATTTTACGCGTGCAAGC-CATTCAAGAACTCGGTTTAACAAACCCTG 1310
||||| || ||| || | || || ||||| | ||||||||||| ||| |||||| |
Sbjct 1382 GGCTGTCCTTGGCGTTATGCGTGTCCAAGCTC-TTCAAGAACTCAATTTGACAAACGCAA 1440
Query 1311 TGCGGTATGGGAATCTTCTCCCGTTCAATCTCTGTGATCAGCTTCCTGGTGGAGACC-GT 1369
||||||| | ||||||||||||||||||||||| ||||||||||| |||||||| | |
Sbjct 1441 TGCGGTACGAAAATCTTCTCCCGTTCAATCTCTGCGATCAGCTTCCCGGTGGAGATCTG- 1499
Query 1370 ATTCTGGAGACGCTTGCAGAGATGTCTACTTCTAGAGTGCTTGACCGGA-CAAACAAAGC 1428
||||| ||||||||||||||||||||||| || |||| ||| | || | |||| ||| |
Sbjct 1500 ATTCTTGAGACGCTTGCAGAGATGTCTACCTCAAGAGAGCTCCATCG-ATCAAATAAATC 1558
Query 1429 CAAAGA-A--GGGACATTGCACTCGATCTCGGCCTCGGATATGGTTTCGCAATTGGGTT- 1484
|||||| | |||||||| || || ||| || || |||||||||||||| ||||||
Sbjct 1559 CAAAGATACAGGGACATTACATTC---CTCAGCTTCTGATATGGTTTCGCAGCTGGGTTC 1615
Query 1485 TGGTGTTTGGAGCAACAAGTCC-A--A--AG-AGT-AGA--AGTAGTCTTGTGGTAGGTG 1535
|| ||||||||| ||||||| | | || || ||| |||||||||||||||||||
Sbjct 1616 TG-TGTTTGGAGGGTCAAGTCCTAGGAGCAGGAGGGAGACGAGTAGTCTTGTGGTAGGTG 1674
Query 1536 AGGT-GATGGTTGGAGATGTGAATCCATTGGAGAAAGCAGTTAAGCAATCAAGAAAGAAC 1594
| || | |||||||||||||||||||||| |||| |||||| ||| | || | |||||
Sbjct 1675 AAGTAG-TGGTTGGAGATGTGAATCCATTAGAGAGAGCAGTGAAGGAGTCGCGCAAGAAA 1733
Query 1595 TATGAGAAAGTGGTTCTTGCACAAGAGACGGTTAATGGAGTTAAAGTTGATGGAATTGAC 1654
|| |||||||| ||||| || ||||||||| ||||||| || ||| | | ||| ||||||
Sbjct 1734 TACGAGAAAGTAGTTCTAGCGCAAGAGACGATTAATGGGGTGAAAATGGGTGGCATTGAC 1793
Query 1655 ACCAA-TGTAGCAGTGATGAAGGAACTGCTACTTCCGGTTATAGAAATCGGGAA-TTGGC 1712
||||| | |||| ||||||||||||||| | ||||| | || |||| | |||| ||
Sbjct 1794 ACCAACT-TAGCCGTGATGAAGGAACTGATGCTTCCAATAATGGAAACCTGGAACTTAA- 1851
Query 1713 TTTTGTC-GTTAGCT-TATTGGGAGGATCCATTGAA-GTCTTTTGTTTTCTGTCTCTTCT 1769
|| | || || | | |||||||| ||||| | || |||| |||||||||||||||
Sbjct 1852 TTCTATCTGTG-G-TGTATTGGGATGATCC-TACAAAGTCTAGTGTTTTCTGTCTCTTGA 1908
Query 1770 CAACTTTCATAATTTACAGGGGGTGGATTGGCTATGTTTTTGCGATTGCGTCTCTCTT-T 1828
| ||||||||||||| ||||| ||| ||| ||||| ||||| ||||||||||||| |
Sbjct 1909 CCACTTTCATAATTTGGAGGGGATGGCTTGTTTATGTCTTTGCTCTTGCGTCTCTCTTCT 1968
Query 1829 ATAGCGGGT-TTCATGGTTCTCACGAGATATTTCAGCAATAGAGAGAAAG-TAATGATCG 1886
| || | |||||||||||||| |||| |||||||| |||| |||| | |||||||
Sbjct 1969 CT-GCCA-TCTTCATGGTTCTCACAAGATGTTTCAGCA---GAGA-AAAGCTCATGATCG 2022
Query 1887 AGCTGAAAGTTA-TAGCGCCGCCTCCTATGAACACAATGGAACAGCTTTTAGCAGTCCAA 1945
|||||||||| | | || || ||||| ||||||||||||||||||||||| ||||||||
Sbjct 2023 AGCTGAAAGTAACT-GCTCCTCCTCCAATGAACACAATGGAACAGCTTTTGGCAGTCCAG 2081
Query 1946 AACGCGATTTCACAGCTCGAACAGTTA-ATCCAAGACGCAAACATTGTTCTCCTCAAGTT 2004
|||| ||| || ||||||||||| | || |||||||||||||| ||||| ||||||||
Sbjct 2082 AACGGGATCTCGGAGCTCGAACAGA-ACATTCAAGACGCAAACATCGTTCTTCTCAAGTT 2140
Query 2005 CCGAGCTTTACTACTCTCTCTTTTCCCACAGGCGAGTGAGAAGTTTGCGGTTGCGATTGT 2064
|||||||||| || |||| |||||||| |||||||| ||||||||||| ||||||||||
Sbjct 2141 CCGAGCTTTATTATTCTCGCTTTTCCCTCAGGCGAGCCAGAAGTTTGCGATTGCGATTGT 2200
Query 2065 GATCGCTGCGTCGATGATGGCATTAGTGCCTTGGAA-CAATCT-GATT-CTGGTGGTGTT 2121
| |||| ||| |||||||||| || || || ||| | | || | || | ||| || ||
Sbjct 2201 GGTCGCAGCGACGATGATGGCCTTTGTTCCG-GGACGCTA-CTTGCTTTC-GGTTGTATT 2257
Query 2122 TCTTGAGCTGTTCACAAGATACTCGCCACCGCGTAGAGCAAGCACGGAACGGTTGATGCG 2181
| ||||||| |||||||||||||||||||| | ||||| |||||||||||||| || |
Sbjct 2258 TGTTGAGCTTTTCACAAGATACTCGCCACCAAGGAGAGCTAGCACGGAACGGTTAATAAG 2317
Query 2182 GCGGCTTAA-AGAGTGGTGGTTCAGCATTCCGGCTGCTCCGGTTGTTCTTGAACA-GAGC 2239
|||| || | |||||||||||| || || || || ||||| || || ||| ||| || |
Sbjct 2318 GCGG-TTGAGAGAGTGGTGGTTTAGTATACCAGCGGCTCCAGTGGTCCTTCTACATGA-C 2375
Query 2240 AAAGA-CGATAACAAGAA 2256
|| || | |||| |||||
Sbjct 2376 AA-GAACAATAAGAAGAA 2392
> AT1G48850.1 | Symbols: EMB1144 | chorismate synthase, putative
/ 5-enolpyruvylshikimate-3-phosphate phospholyase, putative
| chr1:18064905-18068090 REVERSE LENGTH=1694
Length=1694
Score = 91.6 bits (49), Expect = 3e-17
Identities = 96/117 (82%), Gaps = 10/117 (9%)
Strand=Plus/Minus
Query 2291 TACATTTA-CATGTATGTTGTACAAAAGTTTTTGAATTATTACTATAGAATAAAGTT-T- 2347
||||| || ||||||||||||| |||||| |||| || |||| | || ||| || |
Sbjct 1688 TACATGTATCATGTATGTTGTAGAAAAGTGTTTG-GTT-TTAC-A-CCAAAAAAATTATA 1633
Query 2348 --AAATAGTTTATGTTCCGTGGTAAAATCACATTTAGCTGAATGATGCAGTAGCAAA 2402
|||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct 1632 GAAAATAGTTTATGTT-CGTGGTAAAATCACATTTAGCTGAATGATATAGAAGCAAA 1577
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119276494920
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5