BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474113 Length=1547 Score E Sequences producing significant alignments: (Bits) Value AT1G49820.1 | Symbols: ATMTK, MTK | S-methyl-5-thioribose kinas... 2372 0.0 > AT1G49820.1 | Symbols: ATMTK, MTK | S-methyl-5-thioribose kinase | chr1:18442882-18445098 FORWARD LENGTH=1577 Length=1577 Score = 2372 bits (1284), Expect = 0.0 Identities = 1471/1557 (94%), Gaps = 30/1557 (2%) Strand=Plus/Plus Query 1 ATTGGCCACTGACATGAAACAAAACCAAAAGAAGAATCTTTTG-CAAAAATCGAACCTTT 59 ||||| |||||| ||||||||||||| ||| |||||| |||| |||||||||||||||| Sbjct 1 ATTGGTCACTGATATGAAACAAAACC-AAACTAGAATC-TTTGACAAAAATCGAACCTTT 58 Query 60 AAAACTCAGA-TTTATCTCTC--CAGTCTCCACACTGCTTGAAACTGAAGCAGAGAAGCA 116 |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 59 AAAACTCAGATTTTATCTCTCTTCAGTCTCCACGCTGCTTGAAACTGAAGCAGAGAAGCA 118 Query 117 AA-ACGATGTCTTTTGAGGAGTTTAAGCCATTAAACGAGAAGTCTCTTGTAGACTACATA 175 || | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 119 AAGA-GATGTCTTTTGAGGAGTTTACGCCGTTAAACGAGAAGTCTCTTGTAGACTACATC 177 Query 176 AAGGCAACGCCTGCTCTCTCTTCCAAGATCGGAGCCGACAAGTCC---GATGATTTGGTT 232 ||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 178 AAGTCAACACCTGCTCTCTCTTCCAAGATCGGAGCCGACAAGTCCGATGATGATTTGGTT 237 Query 233 ATCAAAGAAGTTGGAGATGGCAATCTCAATTTCGTTTTCATCGTTGTCGGATCCTCTGGT 292 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 238 ATCAAAGAAGTTGGAGATGGCAATCTCAATTTCGTTTTCATCGTTGTTGGATCCTCTGGT 297 Query 293 TCTCTTGTCATCAAACAGGCACTTCCATATATTCGCTGTATCGGTGAATCGTGGCCAATG 352 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 298 TCTCTTGTCATCAAACAGGCTCTTCCATATATTCGCTGTATCGGTGAATCATGGCCAATG 357 Query 353 ACGAAAGAAAGAGCTTATTTTGAAGCAACAACTTTGAGAAAGCATGGAAATTTATCACCT 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 ACGAAAGAAAGAGCTTATTTTGAAGCAACAACTTTGAGAAAGCATGGAAATTTATCACCT 417 Query 413 GATCATGTTCCTGAAGTCTACCATTTTGACAGAACAATGGCGTTGATCGGAATGAGATAC 472 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 418 GATCATGTTCCTGAAGTCTACCATTTTGACAGAACAATGGCGTTGATTGGAATGAGATAC 477 Query 473 CTCGAGCCTCCTCATATCATTCTCCGTAAAGGACTCATTGCCGGGATTGAGTATCCTTTC 532 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 478 CTTGAGCCTCCTCATATCATTCTCCGCAAAGGACTCATTGCTGGGATTGAGTATCCTTTC 537 Query 533 CTTGCAGACCACATGTCTGATTACATGGCGAAGACTCTCTTCTTCACTTCGCTCCTCTAT 592 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 538 CTCGCAGACCACATGTCTGATTACATGGCGAAGACTCTCTTCTTCACTTCTCTCCTCTAT 597 Query 593 CACGATACCACAGAGCACAGAAGAGCAGTAACTGAATTTTGTGGTAATGTGGAGTTATGC 652 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 598 CACGATACCACAGAGCACAGAAGAGCAGTAACCGAATTTTGTGGTAATGTGGAGTTATGC 657 Query 653 CGATTAACGGAGCAAGTTGTGTTTTCGGACCCATATAGAGTTTCTACATTTAATCGCTGG 712 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 658 CGATTAACGGAGCAAGTTGTGTTTTCGGACCCATATAGAGTTTCCACATTTAATCGTTGG 717 Query 713 ACTTCACCTTATCTTGATGATGATGCTAAGGCTGTGCGCGAAGACAGTGCCTTGAAGCTC 772 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 ACTTCACCTTATCTTGATGATGATGCTAAGGCTGTGCGCGAAGACAGTGCCTTGAAGCTC 777 Query 773 GAGATCGCAGAGCTTAAATCGATGTTCTGTGAAAGAGCTCAAGCTCTAATACATGGTGAT 832 || ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct 778 GAAATCGCAGAGCTAAAATCGATGTTCTGTGAAAGAGCTCAAGCTTTAATACATGGTGAT 837 Query 833 CTTCACACTGGTTCTGTCATGGTTACTCAAGATTCGACACAAGTTATAGATCCAGAGTTT 892 ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 838 CTTCATACTGGTTCTGTCATGGTTACTCAAGATTCAACGCAAGTTATAGATCCAGAGTTT 897 Query 893 TCGTT-TATTGGACCGATGGGTTTCGATATTGGAGCTTATCTTGGTAACTTGATACTAGC 951 ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 898 TCGTTCTA-TGGACCGATGGGTTTCGATATTGGCGCTTATCTTGGTAACTTGATACTAGC 956 Query 952 TTTCTTTGCACAAGATGGACACGCCGCTCAGGGAAATGATCGAAAAGAATACAAGCAGTG 1011 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 957 TTTCTTTGCACAAGATGGACACGCCACTCAGGAAAATGATCGAAAAGAATACAAGCAGTG 1016 Query 1012 GATCTTGAGAACCATTGAGCAAACTTGGGATTTGTTTAACAAAAGGTTCATTGCGCTATG 1071 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1017 GATCTTGAGAACCATTGAGCAAACTTGGAATTTGTTTAACAAAAGGTTCATTGCGCTATG 1076 Query 1072 GGATCAAAACAAAGATGGACCCGGCGAAGCATACCTTGCAGATATCTATAACAACCCCGG 1131 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1077 GGATCAAAACAAAGATGGACCAGGCGAAGCATACCTTGCAGATATCTATAACAATACCGA 1136 Query 1132 GGTTTTGCAGCTTGCTCAAGAAAACTACATGAGGAATTTGTTGCATGACTCACTCGGATT 1191 ||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1137 GGTTTTGAAGTTTGTTCAAGAAAACTACATGAGGAATTTGTTGCATGACTCACTCGGATT 1196 Query 1192 CGGCGCTGCAAAGATGATTAGGAGAATTGTGGGAGTGGCACATGTTGAGGACTTTGAATC 1251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1197 CGGCGCTGCAAAGATGATTAGGAGAATTGTGGGAGTGGCACATGTTGAGGACTTTGAATC 1256 Query 1252 AATCGAAGAAGATAAGCGAAGAGCGGTTTGCGAGAGAAGTGCGCTCGAGTTTGCAAAGAT 1311 |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct 1257 AATCGAAGAAGATAAGCGAAGAGCTATTTGCGAGAGAAGTGCACTCGAGTTTGCGAAGAT 1316 Query 1312 GCTTCTTAAGGAAAGGAGAAAGTTTACTTGTATCGGTGAAGTTGTTTCAGCAATTCAACA 1371 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1317 GCTTCTCAAGGAAAGGAGAAAGTTTAAGAGTATCGGTGAAGTTGTTTCAGCAATTCAACA 1376 Query 1372 TCAAAGCTAAGACATTTTATAATGAAATGTTCTTCTGCTAAAGTTCTTGAAAGTCTTGTT 1431 ||||||||||||| ||||||||| | | |||||||| |||||||||||||||||||| Sbjct 1377 ACAAAGCTAAGACAATTTATAATG---T-T-CTTCTGCTGAAGTTCTTGAAAGTCTTGTT 1431 Query 1432 TTGGATCTTGG-AGTTAATTGCCAAGAAAAATATCACAATGCTGGAGTTATCACATGGAT 1490 ||| ||||||| ||||||||| |||||||| ||||||||||||| ||||||||||||| Sbjct 1432 TTG-ATCTTGGGAGTTAATTGGCAAGAAAAGTATCACAATGCTGC--TTATCACATGGAT 1488 Query 1491 ATGTAATTTGGTGGTTTGTGCCTTTGTGGTGGTGATGATAGTATTCAAATGCATTTT 1547 |||||||| |||||||||| |||||| ||||| ||||||||||||||||| Sbjct 1489 TTGTAATTTAGTGGTTTGTG-----GTGGTGATGATG---GTATTCAAATGCATTTT 1537 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76355028945 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5