BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474150 Length=2580 Score E Sequences producing significant alignments: (Bits) Value AT1G50180.1 | Symbols: | NB-ARC domain-containing disease resi... 3517 0.0 AT1G43180.1 | Symbols: | pseudogene, putative disease resistan... 673 0.0 AT1G50210.1 | Symbols: | pseudogene, similar to NBS-LRR protei... 329 7e-89 > AT1G50180.1 | Symbols: | NB-ARC domain-containing disease resistance protein | chr1:18584235-18587136 FORWARD LENGTH=2574 Length=2574 Score = 3517 bits (1904), Expect = 0.0 Identities = 2070/2151 (96%), Gaps = 8/2151 (0%) Strand=Plus/Plus Query 1 ATGGCAGAGGCTATTGTTTCTGTTACAGTGCAGAAGCTGGGAGAGTTGCTCTTGGAAGAA 60 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct 1 ATGGCAGAGGCTATTGTTTCTGTTACAGTGCAGAAGCTAGGACAGTTGCTCTTGGAAGAA 60 Query 61 CCGTTGTTCTTATTTGGTATAGGTGACCAAGTGAAGCAGCTGCAAGACGAATTGAAGCGT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CCGTTGTTCTTATTTGGTATAGGTGACCAAGTGAAGCAGCTGCAAGACGAATTGAAGCGT 120 Query 121 TTGAAGTGCTTTTTGAAAGATGCAGATGAGAAGCAGTATAAAAGCGAGAGAGTGCGTAAC 180 ||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 121 TTGAATTGCTTTTTGAAAGATGCAGATGAGAAGCAGCATGAAAGCGAGAGAGTGCGTAAC 180 Query 181 TGGGTTGCAGGCATTAGAGAAGCTTCTTATGATGCAGAGGATATCCTCGAGGCATGTTTC 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 181 TGGGTTGCAGGCATTAGAGAAGCTTCTTATGATGCAGAGGATATCCTCGAGGCATTTTTC 240 Query 241 CTCAAAGCAGAATCAAGGAAACAAAAAGGGATGAAAAGGGTGCTTAGGAGGCTTGCTTAC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 241 CTCAAAGCAGAATCAAGGAAACAAAAAGGGATGAAAAGGGTGCTTAGGAGGCTTGCTTGC 300 Query 301 ATCTTGAACGAGGCGGTTTCACTTCATAGTGTTGGCTCAGAGATTAGAGAGATCACCTCC 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ATCTTGAACGAAGCGGTTTCACTTCATAGTGTTGGCTCAGAGATTAGAGAGATCACCTCC 360 Query 361 AAGCTTTCTAAGATAGCAGCAAGCATGCTAGATTACGGTATAATAGAAGCTATGGGCAGA 420 | |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||| Sbjct 361 AGGCTTTCTAAGATAGCAGCAAGCATGCTAGATTTTGGTATAAAAGAATCTATGGGCAGA 420 Query 421 GAAGGCTTGAGTTTGTCTGATAGTCAAAGAGAACAGAGGCAGTCGTTTCCAT-TCGTTGT 479 ||||| ||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct 421 GAAGGTTTGAGTTTGTCTGATAGTCTAAGAGAACAGAGGCAATCGTTTCCATAT-GTTGT 479 Query 480 TGAGCATAATCTTGTCGGGTTGGAGCAGAGTCTTGAGAAGTTGGTGAATGATTTAGTTTC 539 ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 480 TGAGCATAATCTTGTTGGGTTAGAGCAGAGTCTAGAGAAGTTGGTGAATGATTTAGTTTC 539 Query 540 TGGAGGTGAGAAACTAAGGGTCACAG-CCATCTGTGGGATGGGTGGTTTGGGGAAAACAA 598 ||||||||||||||||| ||||| | ||||||| || |||||||||||||||||||||| Sbjct 540 CGGAGGTGAGAAACTAAGAGTCAC-GTCCATCTGCGGAATGGGTGGTTTGGGGAAAACAA 598 Query 599 CTTTAGCCAAACAGATTTTCCATCACGGA-AAAGTGAGGCGTCATTTCGATAGGTTTGCT 657 |||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| Sbjct 599 CTTTAGCCAAACAGATTTTCCATCAC-CATAAAGTGAGGCGTCATTTCGATAGATTTGCT 657 Query 658 TGGGTATATGTTTCTCAAGACTGTAGACGGACACATATTTGGCAAGAGATTTTTCTAAAT 717 ||||||||||||||||||||||||||||||| |||| |||||||||| |||||||| ||| Sbjct 658 TGGGTATATGTTTCTCAAGACTGTAGACGGAGACATGTTTGGCAAGACATTTTTCTGAAT 717 Query 718 CTCAGCTACAAGGATGAGAATCAGAGAATACTCAGCTTGAGGGATGAACAGCTTGGAGAG 777 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 718 CTCAGCTACAAGGATGAAAATCAGAGAATACTCAGCTTGAGGGATGAACAACTTGGAGAG 777 Query 778 GAGTTGCATAAGTTCTTGAAAAGGAATAAATGCCTCATTGTGCTTGATGATATCTGGGGC 837 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 GAGTTGCATCGGTTCTTGAAAAGGAATAAATGCCTCATTGTGCTTGATGATATCTGGGGC 837 Query 838 AAAGATGCTTGGGATTGTCTGAAACACGTTTTTCCACATGAAACAGGAAGCGAAATAATC 897 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 838 AAAGATGCTTGGGATTGTCTGAAACACGTCTTTCCACATGAAACAGGAAGCGAAATAATC 897 Query 898 CTCACCACTCGGAACAAGGAAGTCGCTTTATATGCTGATCCCAGGGGTGTGCTTCATGAG 957 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 898 CTCACTACTCGGAACAAGGAAGTCGCTTTATATGCTGATCCCAGGGGTGTGCTTCATGAG 957 Query 958 CCACAATTGCTAACATGTGAAGAGAGTTGGGAGCTGTTGGAGAAAATTTCATTATCTGGA 1017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 CCACAATTGCTAACATGTGAAGAGAGTTGGGAGCTGTTGGAGAAAATTTCATTATCTGGA 1017 Query 1018 AGAGAAGATATAGAGCCAATGTTGGTCAAGAAACTGGAGGAGATTGGGAAGCAGATAGTC 1077 |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1018 AGAGAAAATATAGAGCCAATGTTGGTCAAGAAAATGGAGGAGATTGGGAAGCAGATAGTT 1077 Query 1078 GTAAGGTGTGGAGGTTTACCTCTAGCTATAACAGTTCTTGGAGGACTTCTGGCAATGAAA 1137 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1078 GTAAGGTGTGGAGGTTTACCTCTAGCTATAACAGTTCTTGGAGGACTTCTGGCAACGAAA 1137 Query 1138 AGTACATGGAACGAGTGGCAAAGAGTATACGAGAACATCAAATCATATGTTTCAAACGGA 1197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 1138 AGTACATGGAACGAGTGGCAAAGAGTATGCGAGAACATCAAATCATATGTTTCAAATGGA 1197 Query 1198 GGTAGTAGCAATGGAAGTAAGAACATGCTAGTTGCAGATGTTTTATGCTTGAGTTACGAG 1257 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1198 GGTAGTAGCAATGGAAGTAAGAACATGCTAGTTGCAGATGTTTTGTGCTTGAGTTACGAG 1257 Query 1258 TACTTGCCTCCCCATCTAAAGCAATGTTTCCTCTACTTTGCTCATTATCCTGAAGACTAT 1317 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1258 TACTTGCCTCCCCATGTAAAGCAATGTTTCCTCTACTTTGCTCATTATCCTGAAGACTAT 1317 Query 1318 GAGGTTCATGTGGGAACATTAGTTAGTTACTGGATCGCAGAGGGAATGGTTATGCCTGTA 1377 |||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| Sbjct 1318 GAGGTTCATGTGGGAACACTAGTTAGTTATTGCATCGCAGAGGGAATGGTTATGCCTGTA 1377 Query 1378 AAACACACAGAGGCTGGCACGACAGTAGAAGATATTGGGCAAGATTATCTCGAAGAATTA 1437 |||||||||||||||||||||||||| |||||| | |||||||||||||| || |||||| Sbjct 1378 AAACACACAGAGGCTGGCACGACAGTGGAAGATGTCGGGCAAGATTATCTTGAGGAATTA 1437 Query 1438 GTAAAGAGAAGCATGGTTATGGTTGGGAGGAGGGACATTGTAACTTCGGAAGTCATGACA 1497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 GTAAAGAGAAGCATGGTTATGGTTGGGAGGAGGGACATTGTAACTTCGGAAGTCATGACA 1497 Query 1498 TGCCGTATGCATGACCTCATGAGGGAGGTGTGTTTACAGAAGGCAGAGCAAGAAAGCTTT 1557 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1498 TGCCGTATGCATGACCTCATGAGGGAGGTGTGTTTACAGAAGGCAAAGCAAGAAAGCTTT 1557 Query 1558 GTCCAAGTTATTGATTCAAGGGATCAAGATGAAGCTGAGGCTTTTTTATCTCTTTCGACC 1617 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1558 GTGCAAGTTATTGATTCAAGGGATCAAGATGAAGCTGAGGCTTTTATATCTCTTTCGACC 1617 Query 1618 AATACATCTCGTAGAATTTCTGTTCAATTACATGGTGGAGCAGAGGAGCACCAGATCAAG 1677 ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| Sbjct 1618 AATACATCTCGTAGAATTTCTGTCCAACTACATGGTGGAGCAGAGGAGCACCATATCAAG 1677 Query 1678 AGACTTTCTCAGGTTTCCTTCAGAAAGATGAAACTTCTTCGAGTTCTAGATCTCGAGGGA 1737 || || || |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1678 AGTCTGTCGCAGGTTTCCTTCAGAAAGATGAAACTTCTTCGAGTTCTAGATCTTGAGGGA 1737 Query 1738 GCTCAAATCGAGGGAGGGAAGTTGCCAGACGATGTAGGAGATCTCATCCATTTGAG-ATA 1796 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 1738 GCTCAAATCGAGGGAGGGAAGTTGCCAGACGATGTAGGAGATCTCATCCATTTGAGGA-A 1796 Query 1797 CCTGAGCGTGAGATTGACAAACGTGAAGGAACTTACAACATCTATTGGAAACTTAAAGTT 1856 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1797 CCTGAGCGTGAGATTGACAAACGTGAAGGAACTTACATCATCTATTGGAAACTTAAAGTT 1856 Query 1857 GATGATTACTCTAGACTTGTTTGTGAAGGGGCAACTGTATATTCCAAACCAACTCTGGGA 1916 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1857 GATGATTACTCTAGACTTGTTCGTGAAAGGGCAACTGTATATTCCAAACCAACTCTGGGA 1916 Query 1917 TTTTCCTGTTGGAAAATGCAATCCAAGGGATCTTTTAGCAATGACCAGTCTTAGAAGATT 1976 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1917 TTTTCCTGTTGGAAAGTGCAATCCAAGGGATCTTTTAGCAATGACAAGTCTTAGAAGATT 1976 Query 1977 GTCTATCAATCTTTCTTCGCAGAACACAGACTTCGAGGTGGTATCTTCTCTAAGTAAAGT 2036 ||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||| Sbjct 1977 GTCTATCAATCTTTCTTCGCAGAACACAGACTTCGTGGTGGTGTCTTCACTAAGTAAAGT 2036 Query 2037 CTTGAAACGTCTCCGTGGCTTGACAATAAACGTTCCATGCGAACCTATGCTTCCACCAGT 2096 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2037 CTTGAAACGTCTCCGTGGCTTGACAATAAACGTTCCATGCGAACCTATGCTTCCACCAGT 2096 Query 2097 TGATGTAACACAGTTGGTTTCTGCATTTACTGATCTCTCTGAACTGGAACT 2147 ||||||||||||||||| |||||||||||| |||||| |||||||||||| Sbjct 2097 AGATGTAACACAGTTGGTCTCTGCATTTACTAATCTCTGTGAACTGGAACT 2147 Score = 350 bits (189), Expect = 5e-95 Identities = 223/240 (93%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 2341 GAGAATCTAGAGGAGTGGACTGTAGAAGACGGTGCCATGATGCGTCTTGTCTCCATGGAG 2400 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 2335 GAGAATCTAGAGGAGTGGACTGTAGAAGACGGTGCCATGATGCGTCTTGTCACCGTGGAG 2394 Query 2401 TTGAAGTGCTGTAAGAAACTGAAGTCAGTTCCTGAAGGAACGAGATTCCTGAAGAATCTA 2460 | ||||| ||||| ||||||||||||||||||||||||||||||||||| || |||||| Sbjct 2395 CTAAAGTGTTGTAACAAACTGAAGTCAGTTCCTGAAGGAACGAGATTCCTAAAAAATCTA 2454 Query 2461 CAAGAAGTGGAGATTAGGAACATGAAAAAGGCATTAAAGGATAAGCTGATCTCTGGTGGT 2520 |||||||| |||||| |||||| || ||||||||| ||||| ||||| |||||||||||| Sbjct 2455 CAAGAAGTAGAGATTGGGAACAGGACAAAGGCATTTAAGGACAAGCTAATCTCTGGTGGT 2514 Query 2521 GAAGATTTCTACAAGGTTCAACATGTGCCTTGTGTTGTTTTCGAGAACTGTGACCTTTAA 2580 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 2515 GAAGATTTCTACAAGGTTCAACATGTGCCTTGTGTTGTTTTTGAGAACTGTGAACTTTAA 2574 Score = 268 bits (145), Expect = 1e-70 Identities = 152/155 (98%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 2148 AACAGAG-TTCTCCTCTGATCTTGGTGCTCTACGTTTGTGGCAATGCGGATTAGTGGATG 2206 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2177 AACAGAGTTTCTCCTCTGATCTTGGTGCTCTACGTTTGTGGCAATGCGGATTAGTGGATG 2236 Query 2207 ACCCGTTTCTGGTTCTCGAGAAGCTTCCAAACTTGAAGATTCTCCAACTGTTTGAAGGAT 2266 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2237 ACCCGTTTATGGTTCTCGAGAAGCTTCCAAACTTGAAGATTCTCCAACTGTTTGAAGGAT 2296 Query 2267 CATTTGTAGGTAGTAAGCTTTGTTGTTCCAAAAAT 2301 ||||||||||||||||||||||||||||||| ||| Sbjct 2297 CATTTGTAGGTAGTAAGCTTTGTTGTTCCAAGAAT 2331 > AT1G43180.1 | Symbols: | pseudogene, putative disease resistance protein, similar to disease resistance protein GI:8843900 from (Arabidopsis thaliana); blastp match of 30% identity and 8.6e-32 P-value to GP|4092774|gb|AAC99466.1||AF105140 disease resistance gene homolog 9N {Brassica napus} | chr1:16271201-16272798 REVERSE LENGTH=1598 Length=1598 Score = 673 bits (364), Expect = 0.0 Identities = 413/436 (95%), Gaps = 5/436 (1%) Strand=Plus/Plus Query 2148 AACAGAG-TTCTCCTCTGATCTTGGTGCTCTACGTTTGTGGCAATGCGGATTAGTGGATG 2206 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1135 AACAGAGTTTCTCCTCTGATCTTGGTGCTCTACGTTTGTGGCAATGCGGATTAGTGGATG 1194 Query 2207 ACCCGTTTCTGGTTCTCGAGAAGCTTCCAAACTTGAAGATTCTCCAACTGTTTGAAGGAT 2266 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1195 ACCCTTTTGTGGTTCTCGAGAAGCTTCCAAACTTGAAGATTCTCCAACTGTTTGAAGGAT 1254 Query 2267 CATTTGTAGGTAGTAAGCTTTGTTGTTCCAAAAATGGTTTTCCTCAACTGCATTCTTTGA 2326 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct 1255 CATTTGTAGGTAGTAAGCTTTGTTGTTCCAAAAGTGGTTTTACTCAACTGCATTCTTTGA 1314 Query 2327 CATTGTCAGAGCTTGAGAATCTAGAGGAGTGGACTGTAGAAGACGGTGCCATGATGCGTC 2386 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1315 CATTGTCACAGCTTGAGAATCTAGAGGAGTGGACTGTAGAAGACGGTGCCATGATGCGTC 1374 Query 2387 TTGTCTCCATGGAGTTGAAGTGCTGTAAGAAACTGAAGTCAGTTCCTGAAGGAACGAGAT 2446 ||||||| |||||||| ||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 1375 TTGTCTCGATGGAGTTAAAGTGTTGTAACAAACTGAAGTCAGTTCCCGAAGGAACGAGAT 1434 Query 2447 TCCTGAAGAATCTACAAGAAGTGGAGATT-AGGAACATGAAAAAGGCAT-TAAAGGATAA 2504 ||||||| |||||||||||| | |||||| |||| ||||| |||||||| ||| ||| || Sbjct 1435 TCCTGAAAAATCTACAAGAATTAGAGATTGAGGA-CATGACAAAGGCATCTAA-GGACAA 1492 Query 2505 GCTGATCTCTGGTGGTGAAGATTTCTACAAGGTTCAACATGTGCCTTGTGTTGTTTTCGA 2564 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 1493 GCTGATCTCTGGTGGTGAAGATTACTACAAGGTTCAACATGTGCCTTGTGTTGTTTTTGA 1552 Query 2565 GAACTGTGACCTTTAA 2580 ||||||||| |||||| Sbjct 1553 GAACTGTGAACTTTAA 1568 Score = 625 bits (338), Expect = 8e-178 Identities = 419/454 (92%), Gaps = 21/454 (5%) Strand=Plus/Plus Query 1078 GTAAGGTGTGGAGGTTTACCTCTAGCTATAACAGTTCTTGGAGGACTTCTGGCAATGAAA 1137 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 18 GTAAGGTGTGGAGGTTTACCTCTAGCTATAACAGTTCTTGGAGGACTTCTGGCAACCAAA 77 Query 1138 AGTACATGGAACGAGTGGCAAAGAGTATACGAGAACATCAAATCATATGTTTCAAACGGA 1197 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 78 AGTACATGGAACGAGTGGCAAAGAGTATACGAGAACATCACATCATATGTTTCAAATGGA 137 Query 1198 GGTAGTAGCAATGGAAGTAAGAACATGCTAGTTGCAGATGTTTTATGCTTGAGTTACGAG 1257 | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 138 GTTAGTAGCAATGGAAGTAAGAACATGCTAGTTGCAGATGTTTTGTGCTTGAGTTACGAG 197 Query 1258 TACTTGCCTCCCCATCTAAAGCAATGTTTCCTCTACTTTGCTCATTATCCTGAAGACTAT 1317 ||||||||||||||| |||||| | | || | |||||||||||| Sbjct 198 TACTTGCCTCCCCATTTAAAGC-A----------A---TG-----T-TCCTGAAGACTAC 237 Query 1318 GAGGTTCATGTGGGAACATTAGTTAGTTACTGGATCGCAGAGGGAATGGTTATGCCTGTA 1377 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 238 GAGGTTCATGTGGGAACACTAGTTAGTTACTGGATCGCAGAGGGAATGGTTATGCCTGTA 297 Query 1378 AAACACACAGAGGCTGGCACGACAGTAGAAGATATTGGGCAAGATTATCTCGAAGAATTA 1437 ||||||||||||||| ||||||||||||||||| | |||||||||||||| || |||||| Sbjct 298 AAACACACAGAGGCTAGCACGACAGTAGAAGATGTCGGGCAAGATTATCTTGAGGAATTA 357 Query 1438 GTAAAGAGAAGCATGGTTATGGTTGGGAGGAGGGACATTGTAACTTCGGAAGTCATGACA 1497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 GTAAAGAGAAGCATGGTTATGGTTGGGAGGAGGGACATTGTAACTTCGGAAGTCATGACA 417 Query 1498 TGCCGTATGCATGACCTCATGAGGGAGGTGTGTT 1531 ||||||||||||||| |||||||||||||||||| Sbjct 418 TGCCGTATGCATGAC-TCATGAGGGAGGTGTGTT 450 Score = 398 bits (215), Expect = 2e-109 Identities = 233/242 (96%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 1906 CAACTCTGGGATTTTCCTGTTGGAAAATGCAATCCAAGGGATCTTTTAGCAATGACCAGT 1965 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 864 CAACTCTGGGATTTTCCTGTTGGAAAGTGCAATCCAAGGGATCTTTTAGCAATGACAAGT 923 Query 1966 CTTAGAAGATTGTCTATCAATCTTTCTTCGCAGAACACAGACTTCGAGGTGGTATCTTCT 2025 |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 924 CTTAGAGGATTGTCTATCAATCTTTCTTCGCAGAACACAGACTTCGAGGTGGTGTCTTCT 983 Query 2026 CTAAGTAAAGTCTTGAAACGTCTCCGTGGCTTGACAATAAACGTTCCATGCGAACCTATG 2085 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 984 CTAAGCAAAGTCTTGAAACGTCTCCGTGGCTTGACAATAAACGTTCCATGCGAACCTATG 1043 Query 2086 CTTCCACCAGTTGATGTAACACAGTTGGTTTCTGCATTTACTGATCTCTCTGAACTGGAA 2145 ||||||||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct 1044 CTTCCACCAGTAGATGTAACACAGTTGGTCTCTGCATTTACTAATCTCTGTGAACTGGAA 1103 Query 2146 CT 2147 || Sbjct 1104 CT 1105 Score = 350 bits (189), Expect = 5e-95 Identities = 213/223 (96%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 1688 AGGTTTCCTTCAGAAAGATGAAACTTCTTCGAGTTCTAGATCTCGAGGGAGCT-CAAATC 1746 ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 547 AGGTTTCCTTCAGAAAGATGAAACTTCTTCGAGTTCTAGATCTCGAGGGAG-TGCAAATC 605 Query 1747 GAGGGAGGGAAGTTGCCAGACGATGTAGGAGATCTCATCCATTTGAG-ATACCTGAGCGT 1805 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 606 GAGGGAGGGAAGTTGCCAGACGATGTAGGAGATCTCATCCATTTGAGGA-ACCTGAGCGT 664 Query 1806 GAGATTGACAAACGTGAAGGAACTTACAACATCTATTGGAAACTTAAAGTTGATGAT--T 1863 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 665 GAGATTGACAAACGTGAAGGAACTTACATCATCTATTGGAAACTTAAAGTTGATGATGAT 724 Query 1864 -ACTCTAGACTTGTTTGTGAAGGGGCAACTGTATATTCCAAAC 1905 ||| |||||||||| ||||||||||||||||||||||||||| Sbjct 725 TACTTTAGACTTGTTCGTGAAGGGGCAACTGTATATTCCAAAC 767 > AT1G50210.1 | Symbols: | pseudogene, similar to NBS-LRR protein, blastp match of 61% identity and 8.2e-06 P-value to GP|5918254|emb|CAB56299.1||AJ249448 NBS-LRR protein {Solanum acaule} | chr1:18600978-18601717 FORWARD LENGTH=740 Length=740 Score = 329 bits (178), Expect = 7e-89 Identities = 200/211 (95%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 1029 AGAGCCAATGTTGGTCAAGAAACTGGAGGAGATTGGGAAGCAGATAGTCGTAAGGTGTGG 1088 ||||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||||| Sbjct 461 AGAGCCAATGTTGGTTAAGAAAATGGAGGAGATTGGGAAGCAGATAATTGTAAGGTGTGG 520 Query 1089 AGGTTTACCTCTAGCTATAACAGTTCTTGGAGGACTTCTGGCAATGAAAAGTACATGGAA 1148 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 521 AGGTTTACCTCTAGCTATAACAGTTCTTGGAGGATTTCTGGCAATGATAAGTACATGGAA 580 Query 1149 CGAGTGGCAAAGAGTATACGAGAACATCAAATCATATGTTTCAAACGGAGGTAGTAGCAA 1208 |||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| Sbjct 581 CGAGTGGCAAAGAGTATATGAGAACATCAAATCATATGTTTCAAATGGAGTTAGTAGCAA 640 Query 1209 TGGAAGTAAGAACATGCTAGTTGCAGATGTT 1239 ||||||||||||||||||| ||||| ||||| Sbjct 641 TGGAAGTAAGAACATGCTAATTGCATATGTT 671 Score = 182 bits (98), Expect = 2e-44 Identities = 110/115 (96%), Gaps = 3/115 (3%) Strand=Plus/Plus Query 919 GTCGCTTTATATGCTGATCCCAGGGGTGTGCTTCATGAGCCACAATTG---CTAACATGT 975 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 274 GTCGCTTTATATGCTGATCCCAGGGGTGTGCTTCATGAGCAACAATTGAAGCTAACATGT 333 Query 976 GAAGAGAGTTGGGAGCTGTTGGAGAAAATTTCATTATCTGGAAGAGAAGATATAG 1030 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 334 GAAGAGAGTTGGGAGCTGTTGGAGAAAATTTCATTATCTGGAAGAGAAAATATAG 388 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 128076205479 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5