BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474375 Length=1471 Score E Sequences producing significant alignments: (Bits) Value AT1G52510.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 2281 0.0 AT1G52500.2 | Symbols: FPG-1, ATFPG-1, ATMMH-1, MMH-1 | MUTM ho... 137 2e-31 > AT1G52510.1 | Symbols: | alpha/beta-Hydrolases superfamily protein | chr1:19561510-19565272 REVERSE LENGTH=1470 Length=1470 Score = 2281 bits (1235), Expect = 0.0 Identities = 1396/1473 (95%), Gaps = 13/1473 (1%) Strand=Plus/Plus Query 1 AAAAATGtctctgctctctcctcttcctctgctccactcattctcctccACCGTCGCCAC 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9 AAAAATGTCTTTGCTCTCTCCTCTTCCTCTGCTCCACTCATTCTCCTCCACCGTCGCCAC 68 Query 61 AAAATCCACCGCCTCTAGAATCACTGCCTCTCCGTCGAAACTCCGCTTCTCCGTCGTCAA 120 |||||||||||||||||||||||||||| | ||||||||| |||||||||| ||| | || Sbjct 69 AAAATCCACCGCCTCTAGAATCACTGCCACGCCGTCGAAAATCCGCTTCTCTGTCATAAA 128 Query 121 CGCGACGCCGGAGAATGGAAACAGCGGTGGTCGTAAAAAAGATCGTGATGAGGATCCTTC 180 ||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| || Sbjct 129 CGCCACGTCGGAGAATGGAAACAGCGGTGGTAGTAAAAACGATCGTGATGAGGATCCATC 188 Query 181 TTTTAACCCATTTGGTTTCGTTACAGATAATCCGTCTAGCCGGAGTGCAATTCAGTTACC 240 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 189 TTTTAACCCATTTGGTTTCGTTACAGACAACCCGTCTAGCCGGAGTGCAATTCAGTTACC 248 Query 241 GGAGTCTCCGGCTGAAGACGGTAACGTCGGTCAAATGCTCTACAGGACTGAAGATAAAGG 300 ||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct 249 AGAGTCTCCGGCGGAAGACGGCAATGTCGGCCAAATGCTCTACAGGACTGAAGATAAAGG 308 Query 301 TAAAGAGTATGGTTCAACTATCAAATCTGGGAAGCTTAGATGGTTTGTGAGAGAGACTGG 360 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 309 TAAAGAGTATGGCTCAACTATCAAATCTGGGAAGCTTAGATGGTTTGTGAGAGAGACTGG 368 Query 361 GTCAAAGGAGAGTCGGCGAGGAACCATTGTTTTTGTTCATGGAGCTCCTACTCAGTCTTT 420 |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 369 ATCAAAGGAGAGTCGTCGAGGAACCATTGTATTTGTTCATGGAGCTCCTACTCAGTCTTT 428 Query 421 TAGTTACCGGACCGTTATGTCTGAGATGTCAGATGCTGGATTTCATTGCTTTGCACCTGA 480 ||| ||| | || || ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 429 TAGCTACAGAACTGTCATGTCTGAGTTGTCAGATGCTGGATTTCATTGCTTTGCACCTGA 488 Query 481 CTGGATAGGTTTCGGATTCAGTGACAAGCCGCAGCCGGGATACGGTTTTAATTACACAGA 540 ||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 489 CTGGATAGGATTCGGATTCAGTGACAAACCGCAGCCTGGATACGGTTTTAATTACACAGA 548 Query 541 AAAAGAGTACCATGAGGCATTTGATAAACTGCTGGAAGTGCTAGAGGTCAAATCTCCTTT 600 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 549 AAAAGAGTACCATGAGGCGTTTGATAAACTGCTTGAAGTGCTAGAGGTCAAATCTCCTTT 608 Query 601 CTTTCTTGTTGTTCAGGGATTTCTTGTAGGTTCATATGGTTTAACTTGGGCTTTGAAAAA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 609 CTTTCTTGTTGTTCAGGGATTTCTTGTAGGTTCATATGGTTTAACTTGGGCTTTGAAAAA 668 Query 661 TCCAAGCAAAGTTGAGAAAATCGCGATCCTTAATAGTCCACTGACCGTTTCATCCCCAGT 720 ||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 669 TCCAAGCAAGGTTGAGAAACTCGCGATCCTTAATAGTCCGCTGACCGTTTCATCCCCAGT 728 Query 721 TCCCGGATTATTTAAGCAACTGAGGATTCCCCTGTTTGGTGAATTCACCTGCCAAAATGC 780 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 729 TCCCGGATTATTTAAGCAGCTGAGGATTCCCCTGTTTGGTGAATTCACCTGCCAAAATGC 788 Query 781 TATCTTGGCCGAGCGGTTCATTGAAGGAGGTAGCCCCTACGTCCTGAAGAATGAGAAAGC 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 789 TATCTTGGCCGAGCGGTTCATTGAAGGAGGTAGCCCCTACGTCCTGAAGAATGAGAAAGC 848 Query 841 TGATGTCTATCGTCTACCTTATTTGTCAAGCGGAGGACCTGGGTTTGCCTTGCTCGAGAC 900 |||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| Sbjct 849 TGATGTGTATCGTCTACCATATTTGTCAAGCGGAGGGCCTGGCTTTGCCTTGCTCGAGAC 908 Query 901 TGCGAAAAAGATCAACTTTGGAGACACCTTGAGTCAAATTGCAAATGGGTTTTCATCGGG 960 |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 909 TGCGAAGAAGATCAACTTTGGAGACACATTGAGTCAAATTGCAAATGGGTTTTCATCAGG 968 Query 961 CAACTGGGATAAACCTACGCTTCTGGCTTGGGGAATAGCTGATAAATATCTGCCTCAGTC 1020 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 969 CAGCTGGGATAAACCTACGCTTCTGGCTTGGGGAATAGCTGATAAATATCTGCCTCAGTC 1028 Query 1021 TATAGCAGAGGAGTTTGAGAAACAGAATCCCCAAAATGTCAAGCTTCGACTCATCGAAGG 1080 |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1029 TATAGCAGAGGAATTTGAGAAACAGAACCCCCAAAATGTTAAGCTTCGACTCATCGAAGG 1088 Query 1081 TGCTGGGCATTTGCCTCAAGAAGACTGGCCGGAGAAAGTAGTTGCAGCCCTCCGAGCATT 1140 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 1089 TGCTGGGCATTTGCCTCAAGAAGACTGGCCAGAGAAAGTAGTTGCTGCCCTCCGAGCATT 1148 Query 1141 TTTCTGACTTCCAAATTCACCAAACAAGGACAAAGGTAATGTTTTGGTGGGTT-TTTCAA 1199 |||||||||||||||| || |||| ||||||| ||||| |||||||||||| | ||| | Sbjct 1149 TTTCTGACTTCCAAATACAACAAAAAAGGACAGAGGTACTGTTTTGGTGGGGTGTTT-A- 1206 Query 1200 GAATCTTACCTCTTTGATGGATGTGTGCAAAGCTTCACATTGCTCTTTGGAAAGGCTAGA 1259 || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1207 GAGTCTTACCTCTTTGATGGATGTGTGCAAAGCTTCACATTGCTCTTTGGAGAGGCTAGA 1266 Query 1260 AGCAGACTGCAACGGGTGGATTCTGGCCTGCGAAAAACAA-AAACTAGTAGAATTAATCG 1318 ||||| ||||||||||||||||||||||||||||||| || ||||||| | | ||||||| Sbjct 1267 AGCAGTCTGCAACGGGTGGATTCTGGCCTGCGAAAAA-AATAAACTAG-A-A-TTAATCG 1322 Query 1319 TACAGCATGTAAACCAGTTTCTTCTGTCGTCAAATGTACAGAGTTGAAAACAAAAGTGGA 1378 ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 1323 TACAGCATGTAAACCCGTTTCTTCTGTCGTCAAATGTACAGA----AAA-CAAAAGTGGA 1377 Query 1379 TACTTTGTGAATCAAATGAGTGGTTACATAGATGCTTTACTTCATTTCAAGTGTAAGTGT 1438 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1378 TACTTTGTGAATCAAATGAGTGGTTACATAGATGCTTTACTTCATTTCAAATGTAAATGT 1437 Query 1439 GTAAAGCTCACTTACTTGGTACAGCACTTCATC 1471 |||||| |||||||||||||||||||||||||| Sbjct 1438 GTAAAGATCACTTACTTGGTACAGCACTTCATC 1470 > AT1G52500.2 | Symbols: FPG-1, ATFPG-1, ATMMH-1, MMH-1 | MUTM homolog-1 | chr1:19559983-19563113 FORWARD LENGTH=1491 Length=1491 Score = 137 bits (74), Expect = 2e-31 Identities = 78/80 (98%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 1207 ACCTCTTTGATGGATGTGTGCAAAGCTTCACATTGCTCTTTGGAAAGGCTAGAAGCAGAC 1266 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct 725 ACCTCTTTGATGGATGTGTGCAAAGCTTCACATTGCTCTTTGGAGAGGCTAGAAGCAGTC 666 Query 1267 TGCAACGGGTGGATTCTGGC 1286 |||||||||||||||||||| Sbjct 665 TGCAACGGGTGGATTCTGGC 646 Score = 104 bits (56), Expect = 2e-21 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 1107 GGCCGGAGAAAGTAGTTGCAGCCCTCCGAGCATTTTTCTGACTTCCAAATTCACCAAACA 1166 |||| |||||||||||||| |||||||||||||||||||||||||||||| || |||| | Sbjct 1457 GGCCAGAGAAAGTAGTTGCTGCCCTCCGAGCATTTTTCTGACTTCCAAATACAACAAAAA 1398 Query 1167 AGGACAAAGGTAAT 1180 |||||| ||||||| Sbjct 1397 AGGACAGAGGTAAT 1384 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72539787525 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5