BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474541 Length=1734 Score E Sequences producing significant alignments: (Bits) Value AT1G54100.1 | Symbols: ALDH7B4 | aldehyde dehydrogenase 7B4 | c... 2529 0.0 > AT1G54100.1 | Symbols: ALDH7B4 | aldehyde dehydrogenase 7B4 | chr1:20195264-20199130 REVERSE LENGTH=1869 Length=1869 Score = 2529 bits (1369), Expect = 0.0 Identities = 1552/1639 (95%), Gaps = 17/1639 (1%) Strand=Plus/Plus Query 46 TTTCAGC-TTTTTTACCAAAAGACGTACACGtctctctctctctct-cCTTTTTAAGATT 103 ||| ||| ||||||| ||||||||||||||||||||||||||| || ||| ||| | | Sbjct 77 TTTAAGCTTTTTTTA-CAAAAGACGTACACGTCTCTCTCTCTCACTCCCTCTTT-A-A-- 131 Query 104 CCGTGATCAGAAGCTCATTTCTTCGATACGATCCA-CATCAGAGATGGGTTCAGCGAACA 162 ||||||||||||||||||||||||||||| | ||| |||||||||||| ||||||| Sbjct 132 ----GATCAGAAGCTCATTTCTTCGATACGATCAACCATTAGAGATGGGTTCGGCGAACA 187 Query 163 AAGAGTACGAGTTTCTGAGTGAGATT-GGCTTGACCTCTCACAACCTGGGATCTTACGTT 221 | |||||||||||||||||||||||| ||| |||| ||||||||| |||||||||||||| Sbjct 188 ACGAGTACGAGTTTCTGAGTGAGATTGGGC-TGACTTCTCACAACTTGGGATCTTACGTT 246 Query 222 GCTGGCAAATGGCAAGCAAACGGACCTCTTGTTTCCACTTTCAATCCTGCTAACAATCAG 281 ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| Sbjct 247 GCTGGCAAATGGCAAGCCAACGGACCTCTTGTTTCAACTCTCAATCCTGCTAACAATCAG 306 Query 282 CCAATTGCTCAAGTTGTGGAAGCTTCTCTAGAAGATTACGAGCAAAGTTTGAAAGCCTGC 341 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| Sbjct 307 CCAATTGCTCAAGTTGTGGAAGCTTCTCTAGAGGATTACGAGCAAGGTTTGAAAGCTTGC 366 Query 342 GAGGAAGCAGCCAAAATATGGATGCAGGTTACGGCTCCTAAGAGAGGTGATATTGTGAGA 401 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 367 GAGGAAGCAGCTAAAATATGGATGCAGGTTACGGCTCCTAAGAGAGGTGATATCGTCAGA 426 Query 402 CAGATTGGAGATGCATTAAGATCCAAACTTGATTATCTTGGTCGTCTTCTTTCACTTGAA 461 |||||||| |||||| |||||||||||||||| |||||||||||||||||||| |||||| Sbjct 427 CAGATTGGGGATGCACTAAGATCCAAACTTGACTATCTTGGTCGTCTTCTTTCTCTTGAA 486 Query 462 ATGGGAAAGATTCTTGCTGAAGGAATCGGAGAAGTCCAGGAAGTAATTGATATGTGTGAT 521 ||||||||||| ||||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct 487 ATGGGAAAGATCCTTGCTGAAGGTATTGGAGAAGTTCAGGAAGTAATTGACATGTGTGAT 546 Query 522 TTTGCTGTTGGTTTGAGCCGGCAACTCAATGGATCCGTTATACCTTCCGAACGCCCTAAC 581 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| Sbjct 547 TTTGCTGTTGGTTTGAGCCGACAACTCAATGGATCGGTTATACCTTCAGAACGCCCTAAC 606 Query 582 CACATGATGTTGGAGATGTGGAATCCTCTTGGCATTGTTGGTGTTATCACAGCGTTTAAT 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 607 CACATGATGTTGGAGATGTGGAATCCTCTTGGCATTGTTGGTGTTATCACAGCGTTTAAT 666 Query 642 TTTCCCTGTGCAGTTCTTGGTTGGAATGCTTGTATTGCACTGGTCTGTGGAAACTGTGTA 701 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 667 TTTCCCTGTGCAGTTCTTGGTTGGAATGCTTGTATTGCTCTTGTCTGTGGAAACTGTGTA 726 Query 702 GTCTGGAAAGGTGCTCCAACAACACCGTTGATCACTATTGCAATGACCAAGCTAGTAGCT 761 |||||||||||||||||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct 727 GTCTGGAAAGGTGCTCCAACTACACCGTTAATAACTATCGCAATGACCAAGCTAGTAGCT 786 Query 762 GAAGTTTTAGAGAAGAACAATTTACCTGGTGCCATTTTTACGGCCATGTGTGGTGGTGCT 821 |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 787 GAAGTTTTAGAGAAAAACAACTTACCCGGTGCCATTTTTACGGCCATGTGTGGTGGTGCT 846 Query 822 GAAATTGGTGAAGCAATAGCGAAAGACACGCGCATTCCCTTAGTATCCTTTACTGGAAGC 881 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 847 GAAATTGGTGAAGCAATAGCCAAAGACACACGCATTCCCTTAGTATCCTTTACTGGAAGC 906 Query 882 TCCAGGGTGGGCTTGATGGTACAACAAACAGTGAATGCGAGATCTGGCAAAACTTTACTT 941 ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 907 TCCAGGGTGGGCTCAATGGTACAACAAACAGTGAATGCGAGATCTGGGAAAACTTTGCTT 966 Query 942 GAACTGAGTGGAAATAATGCAATCATAGTCATGGACGACGCTGACATACAGTTAGCGGCT 1001 || |||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 967 GAGTTGAGTGGAAACAATGCAATCATAGTCATGGACGATGCTGATATACAGTTAGCGGCT 1026 Query 1002 CGATCTGTTCTATTTGCTGCGGTTGGAACTGCTGGTCAACGTTGCACAACTTGCCGTAGG 1061 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1027 CGATCTGTTCTATTCGCTGCGGTTGGAACTGCTGGTCAACGTTGCACAACTTGCCGTAGG 1086 Query 1062 CTGCTTTTGCATGAGAGTGTCTATGACAAAGTACTCGAGCAACTGCTTACTTCATACAAA 1121 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1087 CTGCTTTTGCATGAGAGTGTCTATGACAAAGTACTCGAGCAACTGCTTACCTCATACAAA 1146 Query 1122 CAAGTCAAAATCGGTAATCCTCTTGAGAAAGGGACATTGTTAGGACCACTGCATACTCCT 1181 |||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 1147 CAAGTCAAAATCGGCAATCCTCTTGAGAAAGGGACATTGTTAGGACCATTACATACTCCT 1206 Query 1182 GAATCAAAAAGGAACTTTGAGAAAGGAATTGAAGTCATCAAATCCCAGGCACGCGGTAAA 1241 |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 1207 GAATCAAAAAAGAACTTTGAGAAAGGAATTGAAGTCATCAAATCCCAGG---GTGGTAAA 1263 Query 1242 ATACTAACGGGCGGTAAAGCAGTCGATGGTGAAGGGAACTTTGTGGAGCCTACGATAATC 1301 ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1264 ATACTAACGGGAGGTAAAGCAGTCGAAGGTGAAGGAAACTTTGTGGAGCCTACGATAATC 1323 Query 1302 GAGATATCAGCAGATGCTGCTGTCGTTAAAGAAGAGCTATTTGCTCCGGTTTTATATGTT 1361 |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 1324 GAGATATCAGCAGATGCTGCTGTCGTCAAAGAAGAGCTATTTGCTCCGGTTCTATATGTT 1383 Query 1362 CTAAAGTTTAAGTCATTTGAAGAAGCTGTTGCGATAAACAACTCGGTTCCTCAAGGTCTA 1421 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 1384 CTAAAGTTTAAGTCATTTGGAGAGGCTGTTGCGATAAACAACTCGGTTCCTCAAGGTCTA 1443 Query 1422 AGCAGCTCGATATTCACTCGCAACCCCGAAAACATCTTCAGGTGGATCGGACCACTGGGA 1481 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 1444 AGCAGCTCGATATTCACTCGGAACCCTGAAAACATCTTCAGGTGGATCGGACCACTGGGA 1503 Query 1482 AGTGATTGTGGCATTGTGAATGTGAACATACCGACGAATGGAGCTGAGATTGGTGGAGCC 1541 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1504 AGTGACTGTGGCATTGTGAATGTGAACATACCGACGAATGGAGCTGAGATTGGTGGAGCT 1563 Query 1542 TTTGGAGGCGAGAAAGCGACTGGTGGTGGTCGTGAAGCTGGAAGCGACTCATGGAAACAG 1601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1564 TTTGGAGGCGAGAAAGCGACTGGTGGTGGTCGTGAAGCTGGAAGCGACTCATGGAAACAG 1623 Query 1602 TACATGCGTCGATCCACTTGTACCATCAACTATGGGAACGAGTTACCTCTAGCGCAAGGA 1661 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1624 TACATGCGTCGATCGACTTGTACCATCAACTATGGAAACGAGTTACCTCTAGCGCAAGGA 1683 Query 1662 ATTAACTTCGGTTAGATTT 1680 ||||||||||||||||||| Sbjct 1684 ATTAACTTCGGTTAGATTT 1702 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85742530860 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5