BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474606 Length=2055 Score E Sequences producing significant alignments: (Bits) Value AT1G55490.1 | Symbols: CPN60B, LEN1 | chaperonin 60 beta | chr1... 3225 0.0 AT3G13470.1 | Symbols: | TCP-1/cpn60 chaperonin family protein... 2109 0.0 AT5G56500.1 | Symbols: | TCP-1/cpn60 chaperonin family protein... 1232 0.0 > AT1G55490.1 | Symbols: CPN60B, LEN1 | chaperonin 60 beta | chr1:20715563-20719165 REVERSE LENGTH=2087 Length=2087 Score = 3225 bits (1746), Expect = 0.0 Identities = 1947/2041 (95%), Gaps = 25/2041 (1%) Strand=Plus/Plus Query 40 TTCCTTGCTTCAGCTCCCGTTTTCTTATCCGGAAAACAAAAACTTCCGGTGATAGAACCT 99 |||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct 16 TTCCTTGCTTCAGCTCCCCTTTTCTTATCCGGAAACCAAAAACTTCCGGTGATAAAACCT 75 Query 100 CAATCGTCA------T-C-TC-T-CT--A------CT-TC--T----TGGAAAAAATGGC 134 | |||||| | | || | || | || || | |||| |||||||| Sbjct 76 CCTTCGTCATCTCTCTACTTCTTGCTGAATTTTGTCTGTCTTTGAAGTGGATAAAATGGC 135 Query 135 GTCAACTTTCACTGCCACGTCTTCCATTGGTTCAATGGTTGCTCCAAATGGTCACAAATC 194 |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct 136 GTCAACTTTCACTGCCACATCTTCTATTGGTTCAATGGTTGCTCCGAATGGTCACAAATC 195 Query 195 TGATAAGAAGCTTATGAACAAGTTGTCTTCAAGCTCTTTTGGAAGGAGACAAAGTGTGTG 254 ||||||||| ||||| | |||||||||||||||||| ||||||||||||||||||||||| Sbjct 196 TGATAAGAAACTTATCAGCAAGTTGTCTTCAAGCTCATTTGGAAGGAGACAAAGTGTGTG 255 Query 255 TCCTAGACCCAGAAGATCTGGTTCTGCAATTGTATGTGCAGCCAAGGAATTACATTTCAA 314 |||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| Sbjct 256 TCCTAGACCCAGAAGATCCAGTTCTGCAATTGTGTGCGCAGCAAAGGAATTACATTTCAA 315 Query 315 CAAAGATGGGACTACCATAAGGAAACTTCAAGCTGGTGTCAACAAACTTGCAGACCTTGT 374 |||||||||||||||||| |||| ||||||||||||||||||||| || ||||| ||||| Sbjct 316 CAAAGATGGGACTACCATTAGGAGACTTCAAGCTGGTGTCAACAAGCTCGCAGATCTTGT 375 Query 375 TGGTGTTACACTTGGACCCAAAGGACGAAATGTTGTCCTTGAGAGCAAGTATGGATCACC 434 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 376 TGGTGTTACACTTGGACCCAAAGGACGAAATGTTGTTCTTGAGAGCAAGTATGGATCACC 435 Query 435 AAGAATTGTTAATGACGGTGTGACTGTTGCAAGAGAGGTTGAGTTGGAAGACCCGGTTGA 494 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 436 ACGAATTGTTAATGATGGTGTGACTGTTGCAAGAGAGGTTGAGTTGGAAGACCCGGTTGA 495 Query 495 GAACATTGGTGCTAAGCTTGTGAGGCAAGCGGCTGCCAAAACCAATGACTTGGCTGGTGA 554 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 496 GAACATTGGCGCTAAGCTTGTGAGGCAAGCGGCTGCCAAAACCAATGACTTGGCTGGTGA 555 Query 555 CGGTACAACAACATCTGTTGTTCTTGCACAAGGTTTTATTGCTGAGGGTGTCAAGGTGGT 614 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 556 CGGTACAACAACATCTGTTGTTCTTGCACAAGGTTTTATCGCTGAGGGTGTCAAGGTGGT 615 Query 615 AGCTGCTGGTGCAAACCCTGTTTTGATCACCAGAGGTATTGAGAAGACAGCAAAGGCTTT 674 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 616 AGCTGCTGGTGCAAACCCTGTTTTGATCACCAGAGGTATTGAGAAGACAGCAAAGGCTTT 675 Query 675 GGTTACCGAGCTCAAGAAAATGTCTAAGGAGGTGGAAGACAGTGAACTTGCAGATGTTGC 734 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 676 GGTTACCGAGCTCAAGAAAATGTCTAAGGAGGTTGAAGACAGTGAACTTGCAGATGTTGC 735 Query 735 AGCTGTTAGTGCTGGTAACAACGATGAAATTGGAAATATGATTGCTGAAGCAATGAGCAA 794 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 736 AGCTGTTAGTGCGGGTAACAACGACGAAATTGGAAATATGATTGCTGAAGCAATGAGCAA 795 Query 795 AGTGGGCAGGAAAGGTGTGGTGACCCTTGAGGAGGGTAAAAGTGCCGAGAACAACCTCTA 854 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 796 AGTGGGCAGGAAAGGTGTGGTGACCCTTGAGGAGGGTAAAAGTGCCGAGAACAACCTCTA 855 Query 855 CGTCGTGGAAGGAATGCAATTTGATCGTGGTTATATCTCCCCTTACTTTGTGACAGACAG 914 |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 856 CGTCGTAGAAGGAATGCAATTTGACCGTGGTTATATCTCTCCTTACTTTGTGACAGACAG 915 Query 915 CGAGAAAATGTCTGTCGAGTTCGACAATTGCAAGTTACTTCTCGTTGATAAGAAAATTAC 974 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 916 CGAGAAAATGTCCGTCGAGTTCGACAATTGCAAGTTACTTCTCGTTGACAAGAAAATTAC 975 Query 975 CAATGCAAGAGATCTTGTTGGTGTTTTGGAGGATGCAATTAGAGGTGGATACCCAATATT 1034 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 976 CAATGCAAGGGATCTTGTTGGTGTTTTGGAGGATGCAATTAGAGGCGGATACCCAATATT 1035 Query 1035 AATAATTGCAGAAGACATTGAACAAGAAGCTTTAGCTACTCTTGTTGTAAACAAGCTTAG 1094 ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1036 AATTATTGCTGAAGACATTGAACAAGAAGCTTTAGCGACTCTTGTTGTAAACAAGCTTAG 1095 Query 1095 AGGTACACTGAAGATTGCAGCTCTCAGAGCTCCAGGATTTGGAGAGCGCAAGAGCCAATA 1154 ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1096 AGGTACACTGAAGATAGCAGCTCTCAGAGCTCCAGGGTTTGGAGAGCGCAAGAGCCAATA 1155 Query 1155 CCTTGACGATATTGCCATTCTAACTGGAGCAACTGTGATCCGAGAGGAAGTTGGTCTTTC 1214 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1156 CCTTGATGATATTGCCATTCTAACTGGAGCAACTGTGATCCGTGAGGAAGTTGGTCTTTC 1215 Query 1215 ACTTGACAAAGCTGGAAAAGAGGTTCTTGGTAACGCTTCAAAGGTCGTCCTCACGAAGGA 1274 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| Sbjct 1216 ACTTGACAAAGCTGGAAAAGAGGTTCTTGGTAATGCTTCAAAGGTTGTCCTCACAAAGGA 1275 Query 1275 GACTTCGACCATAGTGGGTGATGGAAGCACACAGGATGCAGTGAAAAAGCGTGTTATACA 1334 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1276 GACCTCGACCATAGTGGGTGATGGAAGCACACAGGATGCAGTGAAAAAGCGTGTTACACA 1335 Query 1335 GATAAAAAATCTTATTGAGCAAGCAGAGCAAGATTATGAGAAGGAAAAACTGAATGAGAG 1394 ||| |||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||| Sbjct 1336 GATTAAAAATCTTATTGAGCAAGCGGAGCAAGATTACGAGAAGGAGAAACTCAATGAGAG 1395 Query 1395 AATTGCAAAGCTCTCTGGTGGAGTTGCTGTGATTCAGGTTGGAGCACAAACTGAGACAGA 1454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1396 AATTGCAAAGCTCTCTGGTGGAGTTGCTGTGATTCAGGTTGGAGCACAAACTGAGACAGA 1455 Query 1455 ACTCAAAGAGAAGAAGTTGAGAGTTGAAGATGCTCTTAATGCTACAAAGGCCGCTGTCGA 1514 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1456 ACTCAAAGAGAAGAAGTTGAGAGTTGAAGATGCTCTTAATGCAACAAAGGCCGCTGTCGA 1515 Query 1515 GGAAGGTATTGTTGTTGGTGGTGGTTGCACTCTGCTTCGTCTTGCTTCCAAGGTTGATGC 1574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1516 GGAAGGTATTGTTGTTGGTGGTGGTTGCACTCTGCTTCGTCTTGCTTCCAAGGTTGATGC 1575 Query 1575 CATTAAAGCCACTCTTGATAATGATGAAGAAAAGGTTGGAGCGGATATCGTCAAAAGAGC 1634 |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1576 CATTAAAGCCACGCTTGATAATGATGAAGAAAAGGTTGGAGCGGATATAGTTAAAAGAGC 1635 Query 1635 ACTGAGTTATCCCCTAAAACTGATCGCCAAGAATGCTGGTGTTAATGGAAGCGTAGTTAG 1694 ||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 1636 ACTAAGTTACCCCCTAAAACTAATCGCCAAGAATGCTGGTGTTAATGGAAGTGTAGTTAG 1695 Query 1695 CGAGAAGGTGCTTTCCAACGATAACGTGAAATTCGGTTACAATGCTGCAACCGGCAAGTA 1754 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1696 CGAGAAGGTGCTTTCCAACGATAACGTGAAATTCGGTTACAATGCTGCAACCGGCAAGTA 1755 Query 1755 CGAGGATTTGATGGCTGCAGGAATCATCGATCCAACAAAGGTTGTGAGATGTTGCTTGGA 1814 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1756 CGAGGATTTGATGGCTGCAGGAATCATCGATCCAACAAAGGTTGTGAGATGTTGCTTGGA 1815 Query 1815 GCACGCAGCTTCGGTTGCAAAGACGTTCTTGATGTCGGACTGTGTTGTTGTTGAGATCAA 1874 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1816 ACACGCAGCTTCGGTTGCAAAGACTTTCTTGATGTCGGACTGCGTTGTTGTTGAGATCAA 1875 Query 1875 GGAACCTGAACCAGTTCCCGTCGGCAACCCAATGGACAACTCAGGATATGGATACTAAGA 1934 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1876 GGAACCTGAACCAGTTCCCGTCGGCAACCCAATGGACAACTCAGGATATGGATACTAAGA 1935 Query 1935 GAAGATAGGCTAATATTGAAACGGATTACTTTAGCTTGCGAGTGTAATGATTTTGAACAA 1994 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1936 GGAGATAGGCTAATATTGAAACGGATTACTTTAGCTTGCGAGTGTAATGATTTTGAACAA 1995 Query 1995 GAGAATGTGTAATGTGAAACTGAAATTTTGAATCAATCATCATATGAATAAATTATGATT 2054 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 1996 GAGAATGTGTAATGTGAAACTGAAATTTTGAATTAATCATCATATGAATAAATCATGATT 2055 Query 2055 C 2055 | Sbjct 2056 C 2056 > AT3G13470.1 | Symbols: | TCP-1/cpn60 chaperonin family protein | chr3:4389256-4392801 FORWARD LENGTH=2093 Length=2093 Score = 2109 bits (1142), Expect = 0.0 Identities = 1601/1821 (88%), Gaps = 38/1821 (2%) Strand=Plus/Plus Query 127 AAAATGGCGTCAACTTTCACTGCCACGTCTTCCATTGGTTCAATGGTTGCTCCAAATGGT 186 |||||||| || || |||||||||||||||||| ||||||| || ||||||| |||| | Sbjct 123 AAAATGGCATCGACATTCACTGCCACGTCTTCCCTTGGTTCGTTGCTTGCTCCCAATGCT 182 Query 187 CA-CAAATCTGATAAGAAGCTTATG-AACAAG-TTGTCTTCAAGCTCTTTTGGAAGGAGA 243 | ||| | || | ||| || || || | ||||||||||| |||||||||||| Sbjct 183 -ATCAAGT-TG-T------CTTCTGCGACTAGCATCTCTTCAAGCTCGTTTGGAAGGAGA 233 Query 244 CA-AAGTGTGTGTCCTAGACCCAGAAGATCTGGTTCTGCAATTGTATGTGCAGCCAAGGA 302 || || ||||| | | ||||||||| || |||| || ||||||||||||||||| Sbjct 234 CATAA-CGTGTG--C--G--TCAGAAGATCCCGTCCTGCCATAGTATGTGCAGCCAAGGA 286 Query 303 ATTACATTTCAACAAAGATGGGACTACCATAAGGAAACTTCAAG-CTGGTGTCAACAAAC 361 || |||||||| || ||||||||||||||||||||||||| || ||||||| ||||| | Sbjct 287 GTTGCATTTCAATAAGGATGGGACTACCATAAGGAAACTTC-AGACTGGTGTTAACAAGC 345 Query 362 TTGCAGACCTTGTTGGTGTTACACTTGGACCCAAA-GGACGAAATGTTGTCCTTGAGAGC 420 | || |||||||||||||| ||||||||||| ||| ||| |||||||||| ||||||||| Sbjct 346 TCGCGGACCTTGTTGGTGTCACACTTGGACCAAAAGGGA-GAAATGTTGTTCTTGAGAGC 404 Query 421 AAGTATGGATCACCAAGAATTGTTAATGACGGTGTGACTGTTGCAAGAGAGGTTGAGTTG 480 ||||||||||| ||||||||||||||||| ||||| |||||||| || ||||| |||||| Sbjct 405 AAGTATGGATCCCCAAGAATTGTTAATGATGGTGTCACTGTTGCGAGGGAGGTCGAGTTG 464 Query 481 GAAGACCCGGTTGAGAACATTGGTGCTAAGCTTGTGAGGCAAGCGGCTGCCAAA-ACCAA 539 || ||||||||||||||||||||||| |||||||| |||||||| |||| |||| ||||| Sbjct 465 GAGGACCCGGTTGAGAACATTGGTGCAAAGCTTGTAAGGCAAGCAGCTG-CAAAGACCAA 523 Query 540 TGACTTGGCTGGTGACGGTACAACAACATCTGTTGTTCTTGCACAAGGTTTTATTGCTGA 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 524 TGACTTGGCTGGTGACGGTACAACAACATCTGTTGTTCTTGCACAAGGTTTTATTGCTGA 583 Query 600 GGGTGTCAAGGTGGTAGCTGCTGGTGCAAACCCTGTTTTGATCACCAGAGGTATTGAGAA 659 ||||||||||||||| ||||| ||||| |||||||| |||||||| || || |||||||| Sbjct 584 GGGTGTCAAGGTGGTGGCTGCAGGTGCGAACCCTGTATTGATCACTAGGGGGATTGAGAA 643 Query 660 GACAGCAAAGGCTTTGGTTACCGAGCTCAAGAAA-ATGTCTAAGGAGGTGGAAGACAGTG 718 ||| |||||||||||||||| |||||| || | |||||||||||||| |||||||||| Sbjct 644 GACTGCAAAGGCTTTGGTTAACGAGCTGAA-ACTTATGTCTAAGGAGGTTGAAGACAGTG 702 Query 719 AACTTGCAGATGTTGCAGCTGTTAGTGCTGGTAACAACGATGAAATTGGAAATATGATTG 778 ||||||| ||||| |||||||||||||| ||||| ||| | ||| |||||| |||||||| Sbjct 703 AACTTGCTGATGTGGCAGCTGTTAGTGCGGGTAATAACCACGAAGTTGGAAGTATGATTG 762 Query 779 CTGAAGCAATGAGCAAAGTGGGCAGGAAAGGTGTGGTGACCCTTGAGGAGGGTAAAAGTG 838 |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| | Sbjct 763 CTGAAGCAATGAGCAAAGTGGGCAGGAAGGGTGTGGTGACCCTGGAGGAGGGAAAAAGCG 822 Query 839 CCGAGAACAACCTCTACGTCGTGGAAGGAATGCAATTTGATCGTGGTTATATCTCCCCTT 898 | ||||||||||| || || |||||||||||||||||||| ||||||||||||||||| | Sbjct 823 CTGAGAACAACCTTTATGTTGTGGAAGGAATGCAATTTGACCGTGGTTATATCTCCCCAT 882 Query 899 ACTTTGTGACAGACAGCGAGAAAATGTCTGTCGAGT-TCGACAATTGCAAGTTACTTCTC 957 |||||||||||||||| |||||||||||||| |||| | |||||||||||||| ||||| Sbjct 883 ACTTTGTGACAGACAGTGAGAAAATGTCTGTTGAGTAT-GACAATTGCAAGTTGCTTCTT 941 Query 958 GTTGATAAGAAAATTACCAATGCAAGAGATCTTGTTGGTGTTTTGGAGGATGCAATTAGA 1017 ||||| |||||| | ||||||||||| ||||||||||| ||| | |||||||| |||||| Sbjct 942 GTTGACAAGAAAGTAACCAATGCAAGGGATCTTGTTGGGGTTCTAGAGGATGCGATTAGA 1001 Query 1018 GGTGGATACCCAATATTAATAATTGCAGAAGACATTGAACAAGAAGCTTTAGCTACTCTT 1077 || ||||||||||| | |||||||||||||| |||||||||||||| |||||||||||| Sbjct 1002 GGCGGATACCCAATCCTCATAATTGCAGAAGATATTGAACAAGAAGCCTTAGCTACTCTT 1061 Query 1078 GTTGTAAACAAGCTTAGAGGTACACTGAAGATTGCAGCTCTCAGAGCTCCAGGATTTGGA 1137 ||||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||||| Sbjct 1062 GTTGTTAACAAGCTTAGAGGCACACTGAAGATTGCAGCTCTCAAAGCTCCTGGATTTGGA 1121 Query 1138 GAGCGCAAGAGCCAATACCTTGACGATATTGCCATTCTAACTGGAGCAACTGTGATCCGA 1197 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1122 GAGCGCAAGAGCCAATACCTTGACGATATTGCCATTCTAACTGGAGCAACTGTGATCAGA 1181 Query 1198 GAGGAAGTTGGTCTTTCACTTGACAAAGCTGGAAAAGAGGTTCTTGGTAACGCTTCAAAG 1257 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct 1182 GAGGAAGTTGGTCTTTCTCTTGACAAAGCTGGAAAAGAGGTTCTGGGTAACGCTTCCAAG 1241 Query 1258 GTCGTCCTCACGAAGGAGACTT-CGACCATAGTGGGTGATGGAAGCACACAGGATGCAGT 1316 || ||||| || ||||| | | | || || ||||||||||| | |||||| || ||||| Sbjct 1242 GTTGTCCTGACAAAGGAAA-TGACAACAATTGTGGGTGATGGGACCACACAAGAAGCAGT 1300 Query 1317 GAAAAAGCGTGTTATACAGATAAAAAATCTTATTGAGCAAGCAGAGCAAGATTATGAGAA 1376 ||| ||||||||| ||||||| | ||||||||||||||||| |||||||| || ||||| Sbjct 1301 GAACAAGCGTGTTGTACAGATTAGGAATCTTATTGAGCAAGCGGAGCAAGACTACGAGAA 1360 Query 1377 GGAAAAACTGAATGAGAGAATTGCAAAGCTCTCTGGTGGAGTTGCTGTGATTCAGGTTGG 1436 ||||||| | |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 1361 GGAAAAATTAAATGAGAGAATTGCGAAGCTCTCTGGTGGAGTTGCTGTAATTCAGGTTGG 1420 Query 1437 AGCACAAACTGAGACAGAACTCAAAGAGAAGAAGTTGAGAGTTGAAGATGCTCTTAATGC 1496 ||| |||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||| Sbjct 1421 AGCTCAAACTGAGACAGAGCTCAAAGAAAAGAAGCTGAGAGTGGAAGATGCTCTTAATGC 1480 Query 1497 TACAAAGGCCGCTGTCGAGGAAGGTATTGTTGTTGGTGGTGGTTGCACTCTGCTTCGTCT 1556 ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| || || Sbjct 1481 TACAAAGGCTGCTGTTGAGGAAGGTATTGTCGTTGGTGGTGGTTGCACTCTGCTCCGGCT 1540 Query 1557 TGCTTCCAAGGTTGATGCCATTAAAGCCACTCTTGATAATGATGAAGAAAAGGTTGGAGC 1616 ||| || ||||| |||||||| || | || ||||| ||||||||||||||||||||||| Sbjct 1541 TGCATCAAAGGTCGATGCCATCAAGGATACCCTTGAAAATGATGAAGAAAAGGTTGGAGC 1600 Query 1617 GGATATCGTCAAAAGAGCACTGAGTTATCCC-CTAAAACTGATCGCCAAGAATGCTGGTG 1675 ||| || || ||||||||||||||||| ||| || ||| |||| || ||||||||||||| Sbjct 1601 GGAAATTGTTAAAAGAGCACTGAGTTA-CCCTCTGAAATTGATAGCTAAGAATGCTGGTG 1659 Query 1676 TTAATGGAAGCGTAGTTAGCGAGAAGGTGCTTTCCAACGATAACGTGAAATTCGGTTACA 1735 |||||||||| || || |||||||||||||| | |||||||| |||||||| || |||| Sbjct 1660 TTAATGGAAGTGTTGTCAGCGAGAAGGTGCTGGCTAACGATAATGTGAAATTTGGATACA 1719 Query 1736 ATGCTGCAACCGGCAAGTACGAGGATTTGATGGCTGCAGGAATCATCGATCCAACAAAGG 1795 ||||||||||||||||||| || || ||||||||||||| |||||||| || ||||||| Sbjct 1720 ATGCTGCAACCGGCAAGTATGAAGACCTGATGGCTGCAGGCATCATCGACCCGACAAAGG 1779 Query 1796 TTGTGAGATGTTGCTTGGAGCACGCAGCTTCGGTTGCAAAGACGTTCTTGATGTCGGACT 1855 |||||||||||||||| || || || || || ||||||||||||||||||||||| |||| Sbjct 1780 TTGTGAGATGTTGCTTAGAACATGCCGCCTCAGTTGCAAAGACGTTCTTGATGTCTGACT 1839 Query 1856 GTGTTGTTGTTGAGATCA-AGGAACCTGAACCAGTTCCCG-TCGGCAACCCAATGGACAA 1913 |||| |||||||||||| || | || || |||||||| | | || |||||||||||||| Sbjct 1840 GTGTGGTTGTTGAGATCCCAG-AGCCAGAGCCAGTTCCTGCT-GGTAACCCAATGGACAA 1897 Query 1914 CTCAGGATATGGATACTAAGA 1934 |||||| |||||||||||||| Sbjct 1898 CTCAGGTTATGGATACTAAGA 1918 > AT5G56500.1 | Symbols: | TCP-1/cpn60 chaperonin family protein | chr5:22873791-22877396 FORWARD LENGTH=2318 Length=2318 Score = 1232 bits (667), Expect = 0.0 Identities = 1351/1678 (81%), Gaps = 59/1678 (4%) Strand=Plus/Plus Query 287 TATGTGCAGCCAAGGAATTACATTTCAACAAAGATGGGACTACCA-TAAGGAAACTTCAA 345 ||| ||| || ||| |||| |||||||| || || |||||| | | ||| ||| |||||| Sbjct 240 TATATGCGGCTAAGCAATTGCATTTCAATAAGGACGGGACTGCGATTAA-GAAGCTTCAA 298 Query 346 GCTGGTGTCAACAAACTTGCAGACCTT-GTTGGTGTTACACTT-GGACCCAAAGGAC-GA 402 |||||||| || |||||||| || || ||||| ||||| || || || ||||| | | Sbjct 299 GCTGGTGTGAATAAACTTGCGGA-TTTAGTTGGGGTTAC-TTTAGGTCCTAAAGG-CAGG 355 Query 403 AATGTTGTCCTTGAGAGCAAGTATGGATCACCAAGAATTGTTAATGACGGTGTGACTGTT 462 |||||||| || |||||||| || || || || ||||| |||||||| ||||| || || Sbjct 356 AATGTTGTTCTAGAGAGCAAATACGGTTCCCCTAGAATCGTTAATGATGGTGTTACGGTC 415 Query 463 GCAAGAGAGGTTGAG-TTGGAAGACCCGGTTGAGAACATTGGTGCTAAGCTTGTGAGGCA 521 || |||||||||||| || || || || ||||||||||||||||||||||| ||||| || Sbjct 416 GCTAGAGAGGTTGAGCTT-GAGGATCCAGTTGAGAACATTGGTGCTAAGCTAGTGAGACA 474 Query 522 AGCGGCTGCCAAAACCAATGACTTGGCTGGTGACGGTACAACAACATCTGTTGTTCTTGC 581 ||| ||| |||| || |||||||| |||||||| || ||||| || |||||||||||||| Sbjct 475 AGCTGCTTCCAAGACTAATGACTTAGCTGGTGATGGAACAACGACTTCTGTTGTTCTTGC 534 Query 582 ACAAGGTTTTATTGCTGAGGGTGTCAAGGTGGTAGCTGCTGGTGCAAACCCTGTTTTGAT 641 |||||| |||||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct 535 TCAAGGTCTTATTGCTGAAGGTGTAAAGGTGGTAGCTGCTGGTGCAAATCCTGTTTTGAT 594 Query 642 CACCAGAGGTATTGAGAAGA-CAGCAAAGGCT-TTGGTTACCGAGCTCAAGAAAATGTCT 699 ||||||||||||||||| | || |||| ||| || || | ||| | ||||||||||| Sbjct 595 TACCAGAGGTATTGAGAAAACCACCAAA-GCTCTT-GTGGCTGAGTTGAAGAAAATGTCA 652 Query 700 AAGGAGGTGGAAGACAGTGAACTTGCAGATGTTGCAGCTGTTAGTGCTGGTAACAACGAT 759 |||||||| |||||||||||||| |||||||||||||| |||||||| || ||||| | Sbjct 653 AAGGAGGTTGAAGACAGTGAACTAGCAGATGTTGCAGCAGTTAGTGCAGGAAACAATTAC 712 Query 760 GAAATTGGAAATATGATTGCTGAAGCAATGAGC-AAAG-TGGGCAGGAAAGGTGTGGTGA 817 ||| | || ||||||||||| ||||||||| || |||| ||| | | |||||||| || | Sbjct 713 GAAGTAGGCAATATGATTGCAGAAGCAATG-GCAAAAGTTGGTC-GTAAAGGTGTTGTCA 770 Query 818 CCCTTGAGGAGGGTAAAAGTGCCGAGAACAACCTCTACGTCGTGGAAGGAATGCAATTTG 877 | || ||||| || ||||| || ||||||| ||| ||||| || |||||||||||||||| Sbjct 771 CTCTAGAGGAAGGCAAAAGCGCTGAGAACAGCCTTTACGTTGTTGAAGGAATGCAATTTG 830 Query 878 ATCGTGGTTATATCTCCCCTTACTTTGTGACAGACAGCGAGAAAATGTCTGTC-GAGT-T 935 |||||||||||||||| ||||||||||| || ||||| |||||||||| || | || | | Sbjct 831 ATCGTGGTTATATCTCTCCTTACTTTGTCACCGACAGTGAGAAAATGTGTG-CAGAATAT 889 Query 936 CGACAATTGCAAGTTACTTCTCGTTGATAAGAAA-ATTACCAATGCAAGAGATCTTGTTG 994 || || |||||||| |||| ||||| || ||| || || ||||| |||||| || || Sbjct 890 -GAGAACTGCAAGTTGTTTCTTGTTGACAA-AAAGATAACAAATGCTAGAGATATTATTA 947 Query 995 GTGTTTTGGAGGATGCAATTAGAGGTGGATACCCAATATTAATAATTGCAGAAGACATTG 1054 | || |||| ||||| |||| |||||||||||| | || || ||||| ||||| |||| Sbjct 948 GCATTCTGGAAGATGCGATTAAAGGTGGATACCCGCTTTTGATCATTGCTGAAGATATTG 1007 Query 1055 AACAAGAAGCT-TTAGCTACTCTTGTTGTAAACAAGCTTAGAGGTACACTGAA-GATTGC 1112 | ||||| || ||||| ||||||||||| ||||||||| | || ||| | || | |||| Sbjct 1008 AGCAAGA-GCCATTAGCGACTCTTGTTGTTAACAAGCTTCGTGGGACAATAAAAG-TTGC 1065 Query 1113 AGCTCTCAGAGCTCCAGGATTTGGAGAGCGCAAGAGCCAATACCTTGACGATATTGCCAT 1172 ||| | | |||||| |||||||||||| | || ||||| |||||||| || ||||| Sbjct 1066 TGCTTTGAAAGCTCCTGGATTTGGAGAGAGGAAAAGCCAGTACCTTGATGACATTGCTGC 1125 Query 1173 TCTAACTGGAGCAACTGTGATCCGAGAGGAAGTTGGTCTTTCACTTG-ACAAAGCTGGAA 1231 || || ||||| |||||||| | || |||||||| ||| || ||| | |||| |||| Sbjct 1126 GCTTACAGGAGCTACTGTGATTAGGGAAGAAGTTGGACTT-CAGTTGGAGAAAGTTGGAC 1184 Query 1232 AAGAGGTTCTTGG-TAACGCT--TCAAAGGTCGTCCTCACGAAGGAGACTTCGACCATAG 1288 ||| ||| |||| ||| ||| | |||| | || ||||| || || ||| | || |||| Sbjct 1185 CAGAAGTT-TTGGGTAATGCTGGT-AAAG-TGGTTCTCACAAAAGATACTACAACGATAG 1241 Query 1289 TGGGTGATGGAAGCACACAGGATGCAGTGAAAAAGCGTGTT-ATACAGATAAAAAATCTT 1347 | ||||||||||| || | || | ||||| ||| | ||| | |||||| || |||||| Sbjct 1242 TTGGTGATGGAAGTACTGAAGAAGTTGTGAAGAAGAGAGTTGA-ACAGATCAAGAATCTT 1300 Query 1348 ATTGAG-CAAGCAGAGCAAGATTATGAGAAGGAAAAACTGAATGAGAGAATTGC-AAAGC 1405 || ||| | || || ||||| ||||| |||||||| || |||||||||||||| ||| Sbjct 1301 ATCGAGGCT-GCTGAACAAGACTATGAAAAGGAAAAGCTTAATGAGAGAATTGCTAAAT- 1358 Query 1406 TCTCTGGTGGAGTTGCTGTGATTCAGGTTGGAGCACAAACTGAGACAGAACTCAAAGAGA 1465 | || || || |||||||| ||||||||||||||||||||||||||||| || || |||| Sbjct 1359 TATCAGGCGGTGTTGCTGTAATTCAGGTTGGAGCACAAACTGAGACAGAGCTTAAGGAGA 1418 Query 1466 AGAAGTTGAGAGTTGAAGATGCTCTTAATGCTACAAAGGCCGCTGTCGAGGAAGGTATTG 1525 |||| || |||||||||||||||||||||||||||||||| ||||| || |||||||||| Sbjct 1419 AGAAATTAAGAGTTGAAGATGCTCTTAATGCTACAAAGGCTGCTGTGGAAGAAGGTATTG 1478 Query 1526 TTGTTGGTGGTGGTTGCACTCTGCTTCGTCTTGCTTCCAAGGTTGATGCCATTAAAGCCA 1585 ||||||| || || || |||||||| | ||||| || || || || || ||||||| | Sbjct 1479 TTGTTGGCGGAGGATGTACTCTGCTAAGACTTGCATCGAAAGTGGACGCTATTAAAGAGA 1538 Query 1586 CTCTTG-ATAATGATGAAGAAAAGGTTGGAGCGGATATCGTCAA-AAGAGCACTGAGTTA 1643 |||| | | || |||||||||||||||||||| || || || || || |||| |||| || Sbjct 1539 CTCTAGCA-AACGATGAAGAAAAGGTTGGAGCTGACATTGTTAAGAA-AGCATTGAGCTA 1596 Query 1644 TCCC-CTAAAACTGATCGCCAAGAATGCTGGTGTTAATGGAAGCGTAGTTAGCGAGAAGG 1702 ||| || || | ||||||||||| |||||||| ||||| ||||| || || ||||||| Sbjct 1597 -CCCACTGAAGTTAATCGCCAAGAACGCTGGTGTCAATGGCAGCGTTGTCAGTGAGAAGG 1655 Query 1703 TGCTTTCCAACGATAACG-TGAA-ATTCGGTTACAATGCTGCAACCGGCAAGTACGAGGA 1760 | ||||| | || ||| | || || ||||||||||||||||| ||||| ||||| || Sbjct 1656 TTCTTTCTAGTGACAACCCTAAACAT--GGTTACAATGCTGCAACTGGCAAATACGAAGA 1713 Query 1761 TTTGATGGCTGCAGGAATCATCGATCCAAC-AAAGGTTGTGAGATGTTGCTTGGAGCACG 1819 | | ||||||||||||||||| |||||||| |||| |||||||||||||| | ||||| | Sbjct 1714 TCTCATGGCTGCAGGAATCATTGATCCAACCAAAG-TTGTGAGATGTTGCCTAGAGCATG 1772 Query 1820 CAGCTTCGGTTGCAAAGACGTTCTTGATGTCGGACTGTGTTGTTGTTGAGATCAAGGAAC 1879 | | || || |||||||| ||||||||||| || ||||||||||| ||||||||||| | Sbjct 1773 CTTCATCTGTGGCAAAGACATTCTTGATGTCTGATTGTGTTGTTGTGGAGATCAAGGAGC 1832 Query 1880 CTGAA-C--CAGTTCCCG-TCGGCAACCCAATGGACAACTCAGGATATGGATACTAAG 1933 ||||| | ||| ||| | | || ||||| |||||||| ||||| || || | ||||| Sbjct 1833 CTGAATCAGCAGCTCCTGCT-GGTAACCCTATGGACAATTCAGGTTACGGCTTCTAAG 1889 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 101856905805 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5