BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg474806 Length=999 Score E Sequences producing significant alignments: (Bits) Value AT1G56430.1 | Symbols: ATNAS4, NAS4 | nicotianamine synthase 4 ... 1535 0.0 AT1G09240.1 | Symbols: NAS3, ATNAS3 | nicotianamine synthase 3 ... 758 0.0 > AT1G56430.1 | Symbols: ATNAS4, NAS4 | nicotianamine synthase 4 | chr1:21136944-21138087 FORWARD LENGTH=1144 Length=1144 Score = 1535 bits (831), Expect = 0.0 Identities = 944/999 (94%), Gaps = 6/999 (1%) Strand=Plus/Plus Query 1 AAACCTCATAGTGTCGACATGGGTTATTGCCAAGACGACCAACTCGTAAACAAGATCTGC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 AAACCTCATAGTGTCGACATGGGTTATTGCCAAGACGACCAACTCGTAAACAAGATCTGC 121 Query 61 GATCTATACGAAAAGATCTCGAAGCTCGAGACGCTAAAGCCTTGTGAAGATGTCGACACT 120 ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 122 GATCTTTACGAAAAGATCTCGAAGCTTGAGACCCTAAAGCCTTGTGAAGATGTCGACACT 181 Query 121 CTCTTCAAGCAGCTCGTGTCCACATGCATACCACCAAACCCTAACATCGACGTCACCAAA 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 182 CTCTTCAAGCAGCTCGTGTCCACATGCATACCACCAAACCCTAACATCGACGTCACCAAG 241 Query 181 ATGTCTGAAAACATCCAAGAGATGAGATCAAACCTCATCAAAATTTGTGGAGAAGCTGAA 240 |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| Sbjct 242 ATGTCTGAAAACATCCAAGAGATGAGATCAAACCTCATCAAAATCTGTGGTGAGGCTGAA 301 Query 241 GGTTACTTAGAGCATCACTTCTCTTCAATCTTAACCTCTTTTGAAGACAACCCACTTCAT 300 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 302 GGTTACTTAGAGCATCACTTCTCTTCAATCTTAACCTCTTTTGAAGATAACCCCCTTCAT 361 Query 301 CATTTGAATCTTTTTCCTTACTACAACAACTATCTCAAACTAAGCAAGCTTGAGTTCGAT 360 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct 362 CATTTGAATCTTTTTCCTTACTACAACAACTACCTCAAACTAAGCAAGCTCGAGTTTGAT 421 Query 361 CTCCTCAAACAGAACCTTAACGGTTCAGTTCCAAAGACTGTTGCTTTCATTGGCTCTGGT 420 |||||| |||||||||| ||||||| ||||||| |||||| |||||||||||||||||| Sbjct 422 CTCCTCGAACAGAACCTAAACGGTTTTGTTCCAAGGACTGTAGCTTTCATTGGCTCTGGT 481 Query 421 CCTCTCCCTCTTACTTCTGTCGTTCTTGCCTCTTCGCATCTCAAAGACTCAATCTTTCAC 480 ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| Sbjct 482 CCTCTCCCTCTTACTTCCGTCGTTCTTGCCTCTTCCCATCTCAAAGACTCGATCTTTCAT 541 Query 481 AACTTTGACATCGACCCATCAGCGAATTTGGTAGCAGCTCGGTTGGTTTCGTCTGATCCT 540 ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 542 AACTTTGACATCGACCCATCAGCGAATATGGTAGCAGCTCGTTTGGTTTCGTCTGATCCT 601 Query 541 GATCTTTCACAACGTATGTTCTTCCACACCGTTGATGTAATGGATGTGACTGAGAGCTTA 600 |||||||| ||||||||||| ||||| || |||||| |||||||||| || |||||||| Sbjct 602 GATCTTTCTCAACGTATGTTTTTCCATACTGTTGATATAATGGATGTAACCGAGAGCTTG 661 Query 601 AAGGGCTTCGACGTTGTGTTCTTGGCTGCTCTTGTCGGAATGGATAAAAAGGAGAAGGTT 660 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 662 AAGGGCTTCGACGTTGTGTTCTTGGCTGCTCTTGTAGGGATGGATAAAAAGGAGAAGGTT 721 Query 661 AAAGTGATCGAGCATCTTGAGAAACACATGTCTCCTGGTGCTTTGCTCATGTTAAGAAGT 720 || ||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 722 AAGGTGGTCGAGCATCTTGAGAAACACATGTCTCCTGGTGCTTTGCTCATGCTGAGAAGC 781 Query 721 GCTCATGGACCTAGAGCGTTTCTCTATCCCATCGTCGAGCCTTGTGATCTCCAAGGTTTC 780 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||| Sbjct 782 GCTCATGGACCTAGAGCTTTTCTCTATCCAATCGTTGAGCCTTGTGATCTCGAAGGTTTC 841 Query 781 CAAGTTTTATCGGTTTATCACCCTACCGATGAAGTTATCAACTCCATTGTAATCTCAAGG 840 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 842 GAAGTTTTATCGGTTTATCACCCTACCGATGAAGTTATCAACTCCATTGTAATCTCAAGG 901 Query 841 AAGCTCGGCGGAGAAGATGTTGGTAATGGTGTTGTTCATGATCATATAGATCAAGCTTCG 900 ||||| || | | | |||| | |||||||||||||||||||||||||||||||||||| Sbjct 902 AAGCTAGGTG-A-A-GATGCT---AATGGTGTTGTTCATGATCATATAGATCAAGCTTCG 955 Query 901 GATCTCGAGTGTAACTGTTCCAAGATCCACGTGATTATGAACAAGAAGAAGAGCATTATC 960 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 956 GATCTCGCGTGTAACTGTTCCAAGATCCACGTGATTATGAACAAGAAGAAGAGCATTATC 1015 Query 961 GAGGAGTTCGCAGGTGCTAATGAAGAACAACTTACTTAG 999 ||||||||||||||||||||||||||||||||||| ||| Sbjct 1016 GAGGAGTTCGCAGGTGCTAATGAAGAACAACTTACCTAG 1054 > AT1G09240.1 | Symbols: NAS3, ATNAS3 | nicotianamine synthase 3 | chr1:2984881-2986130 FORWARD LENGTH=1250 Length=1250 Score = 758 bits (410), Expect = 0.0 Identities = 707/848 (83%), Gaps = 29/848 (3%) Strand=Plus/Plus Query 2 AACCTCATAGTGTCGACATGGGTTATTGCCAAGACGACCAACTCGT--AAACAAGATCTG 59 |||||||||||||||||||||| |||||||||||| ||| | || |||| | || || Sbjct 53 AACCTCATAGTGTCGACATGGG---TTGCCAAGACGAACAATTGGTGCAAAC-A-ATATG 107 Query 60 CGATCTATACGAAAAGATCTCGAAGCTCGAGACG-CTAAAGCCTTGTGAAGATGTCGACA 118 |||||| |||||||||||||| ||||| |||| | ||||| || | ||||||||| ||| Sbjct 108 CGATCTCTACGAAAAGATCTCAAAGCTTGAGA-GTCTAAAACCATCCGAAGATGTCAACA 166 Query 119 CTCTCTTCAAGCAGCTCGTGTCCACATGCATACCACCAAACCCTAACATCGACGTCACCA 178 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 167 TTCTCTTCAAGCAGCTCGTTTCCACATGCATACCACCAAACCCTAACATCGATGTCACCA 226 Query 179 AAATGTCTGAAAACA-TCCAAGAGATGAGATC-AAACCTCATCAAAATTTGTGGAGAAGC 236 | |||| || | | | |||||||||| || | || |||||||| |||||||| ||| Sbjct 227 AGATGTGTG-ACAGAGTCCAAGAGATTCGA-CTTAATCTCATCAAGATTTGTGGTCTAGC 284 Query 237 TGAAGGTTACTTAGAGCATCACTTCTCTTCAATCTTAACCTCTTTTGAAGACAACCCACT 296 |||||| ||||||| | || |||||||| ||||| ||||||| ||||||||||||| Sbjct 285 CGAAGGTCACTTAGAAAACCATTTCTCTTCGATCTTGACCTCTTACCAAGACAACCCACT 344 Query 297 TCATCATTTGAATC-TTTTTCCTTACTACAACAACTATCTCAAACTAAGCAAGCTTGAGT 355 ||||||||| || | |||| ||||| |||||||||||| | ||||| | ||||| |||| Sbjct 345 TCATCATTT-AAACATTTTCCCTTATTACAACAACTATTTGAAACTCGGAAAGCTCGAGT 403 Query 356 TCGATCTCCTCAAACAGAACCTTAACGG-TTCAGTTCCAAAGACTGTTGCTTTCATTGGC 414 |||| |||||| |||| ||||| || || || || ||||||| ||| ||||||||||| Sbjct 404 TCGACCTCCTCGAACAAAACCTAAATGGCTT-TGTCCCAAAGAGTGTGGCTTTCATTGGA 462 Query 415 TCTGGTCCTCTCCCTCTTACTTCTGTCGTTCTTGCCTC-TTCGCATCTCAAAGACTCAAT 473 ||||||||||| ||||| ||||| |||||||||| || ||| |||||||||||| |||| Sbjct 463 TCTGGTCCTCTTCCTCTCACTTCCATCGTTCTTGCTTCATTC-CATCTCAAAGACACAAT 521 Query 474 CTTTCACAACTTTGACATCGACCCATCAGCGAATTTGGTAGCAGCTCGGT-TGGTTTCGT 532 ||||||||||||||||||||||||||||||||| | | || ||| | ||||||| | Sbjct 522 CTTTCACAACTTTGACATCGACCCATCAGCGAACTCACTCGCTTCTCT-TCTGGTTTCCT 580 Query 533 CTGATCCTGATCTT-TCACAACGTATGTTCTTCCACACCGTTGATGTAATGGATGTGACT 591 ||||||| || | | || ||||| ||||||||||||||||||||| ||||||| ||||| Sbjct 581 CTGATCCAGA-CATCTCTCAACGCATGTTCTTCCACACCGTTGATATAATGGACGTGACA 639 Query 592 GAGAGCTTAAAGGGCTTCGACGTTGTGTT-CTTGGCTGCTCTTGTCGGAATGGATAAAAA 650 |||||||||||| |||| || || ||||| || | |||||||||| |||||| | ||| | Sbjct 640 GAGAGCTTAAAGAGCTTTGATGTCGTGTTTCTAG-CTGCTCTTGTTGGAATGAACAAAGA 698 Query 651 GGAGAAGGTTAAAGTGATCGAGCATCTTG-AGAAACACATGTCTCCTGGTGCTTTGCTCA 709 |||||| |||||||||||||||||||| | ||||||||||| ||||||||||| |||||| Sbjct 699 GGAGAAAGTTAAAGTGATCGAGCATCT-GCAGAAACACATGGCTCCTGGTGCTGTGCTCA 757 Query 710 TG-TTAAGAAGTGCTCATGGACCTAGAGCGTTTCTCTATCCCATCGTCGAGCCTTGTGAT 768 || ||| || |||||||||| || ||||||||||| ||||| ||||| ||||| |||||| Sbjct 758 TGCTTAGGA-GTGCTCATGGTCCGAGAGCGTTTCTTTATCCGATCGTTGAGCCGTGTGAT 816 Query 769 CTCCAAGGTTTCCAAGTTTTATCGGTTTATCACCCTACCGATGAAGTTATCAACTCCATT 828 || || || ||| | ||||| || |||||||||| || ||||| |||||||||||| | Sbjct 817 CTTCAGGGGTTCGAGGTTTTGTCTATTTATCACCCAACAGATGATGTTATCAACTCCGTG 876 Query 829 GTAATCTC 836 || ||||| Sbjct 877 GTGATCTC 884 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 48928059178 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5