BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475028 Length=678 Score E Sequences producing significant alignments: (Bits) Value AT1G63190.1 | Symbols: | Cystatin/monellin superfamily protein... 835 0.0 > AT1G63190.1 | Symbols: | Cystatin/monellin superfamily protein | chr1:23431835-23433002 FORWARD LENGTH=678 Length=678 Score = 835 bits (452), Expect = 0.0 Identities = 612/686 (89%), Gaps = 24/686 (3%) Strand=Plus/Plus Query 1 ATGGGTGACTTTGAAGGCTGGACT-AAGTGGCTGGTACCAGGGTTTCTGCTGTGGAAACC 59 ||| |||| ||||||||||||| | || ||||| | ||||| |||| ||||||||||||| Sbjct 1 ATGAGTGAATTTGAAGGCTGGA-TCAAATGGCTCGAACCAGTGTTTTTGCTGTGGAAACC 59 Query 60 AGAGGATCCTGGCTATGAGAGACCTGCGTACAGGGATTGGACCGAGGAGGAGGATGAGCC 119 ||||||||||||||||||||||| ||||| |||||||||||| | ||||| |||||||| Sbjct 60 TGAGGATCCTGGCTATGAGAGACCAGCGTATAGGGATTGGACCAAAGAGGAAGATGAGCC 119 Query 120 TAAGTACTCACCAAAGGAAGAACTTGCCTTACTCGACAAACAAATCCTTGCAAGCGATGG 179 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 TAAGTACTCACCAGAGAAAGAACTTGCCTTACTCGACAAACAAATCCTTGCAAGCGATGG 179 Query 180 GTTTGATATCGACTACACACACTTCCGGTGTGTCTTCAACTACCATCTTGCTTATCTCGA 239 ||||||||||||| |||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct 180 TTTTGATATCGACTTCACACACTTCCGTTGTGTATTCAATTACCATCTTGCTTATCTCGA 239 Query 240 CTCAGATGAATTCGCTGAGGAGCCAACAGAAACCACTAGGGATTTACTCGAGAGGCTCTC 299 ||| ||||||||| ||| ||| | |||||||||| || |||||||||||||||||||| Sbjct 240 TTCACATGAATTCGTTGATGAG-C--CAGAAACCACAAGAGATTTACTCGAGAGGCTCTC 296 Query 300 TAGGAAGGCCCTTGATGACCACAATCTCGAAT-ATGGAACAGAATTTGAGTTTGTCAAGG 358 ||||||||||||||||||| |||||| |||| | ||||| |||||||||||||||||| Sbjct 297 TAGGAAGGCCCTTGATGACTACAATCAAGAATCA-AGAACACAATTTGAGTTTGTCAAGG 355 Query 359 TTGTGAAAGCCAACTTTCACTGGTGTTGTGC-ATATATGTTTCTCATAACATTTGAAGTT 417 |||||||||| |||||||||| |||||||| || ||||||||||||||| || |||||| Sbjct 356 TTGTGAAAGCAAACTTTCACTTTTGTTGTGCGAT-TATGTTTCTCATAACCTTCGAAGTT 414 Query 418 GTTGATCCTTATGATAACTTGATAAAACTCTTCCAAACAAGGGTTCGCTACG-AGACAGA 476 ||||| ||||||||||||||||| |||||||||||||||||||||||| ||| || ||| Sbjct 415 GTTGACCCTTATGATAACTTGATCAAACTCTTCCAAACAAGGGTTCGCCACGCTGA-AGA 473 Query 477 TATCGTGACTGAGTATGTCTTCTGCAGGCCGAAACCCAATCAAGGAGTGGAATGCATTGG 536 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 474 TATCGTGACTGAGTACGTCTTTTGCAGGCCGAAACCCAATCAAGGAGTGGAATGCATTGG 533 Query 537 TGTGAAGAACAATGATGTTGTTGGGAAAGATGTCCAAAACAA-TGTCAAGAAACAAAAGA 595 ||||||||||||||||| | | ||||||||||||| ||| ||||||| ||||| ||| Sbjct 534 TGTGAAGAACAATGATG--G--G--AAAGATGTCCAAA-CAAATGTCAAGGAACAAGAGA 586 Query 596 TTCCTTGTATGTATGGATGGTTTTTAACAGTTATCGGC-T----TTCTCTTTACAGATTG 650 ||||||||||||||||||||||||||| ||| ||| | | ||| |||||||||||| Sbjct 587 TTCCTTGTATGTATGGATGGTTTTTAAGAGTAATCACCATCACCTTCACTTTACAGATTG 646 Query 651 GAGTATGAGCTTCTATATGCCACAAG 676 ||||| |||||||||||||||||||| Sbjct 647 GAGTAGGAGCTTCTATATGCCACAAG 672 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32802897991 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5