BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475237
Length=1585
Score E
Sequences producing significant alignments: (Bits) Value
AT1G60940.1 | Symbols: SNRK2-10, SNRK2.10, SRK2B | SNF1-related... 1993 0.0
AT1G10940.2 | Symbols: | Protein kinase superfamily protein | ... 1064 0.0
AT5G08590.1 | Symbols: ASK2, SNRK2-1, SNRK2.1, SRK2G | SNF1-rel... 525 5e-148
> AT1G60940.1 | Symbols: SNRK2-10, SNRK2.10, SRK2B | SNF1-related
protein kinase 2.10 | chr1:22439123-22442190 REVERSE LENGTH=1655
Length=1655
Score = 1993 bits (1079), Expect = 0.0
Identities = 1374/1504 (91%), Gaps = 69/1504 (5%)
Strand=Plus/Plus
Query 1 AAGAGCCATCGTGACTTCGTGAGAAGAAGCCAGCAAGGAACGATGGAGATTATTACGG-- 58
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1 AAGAGCCATCGTGACTTCGAGAGAAGAAGCCAGCAAGGAACGATGGAGATTATTACGGCA 60
Query 59 -------CATCATCATCATCATTGTAA-TC-T--TC-T-TC-TC--TTAGAATTTCTTCA 102
|||||||||||||||||||| || | || | || || || |||||||||||
Sbjct 61 TCATCATCATCATCATCATCATTGTAATTCGTAATCATATCTTCTTTTGGAATTTCTTCA 120
Query 103 CGGATAAGAAAAAAGGATATCGACAATTTCGCTTTTGCTTTCAAAAATTC-CATT-T-TC 159
|||||||||||||||||||||||||||||||||||||||||| |||| || |||| | ||
Sbjct 121 CGGATAAGAAAAAAGGATATCGACAATTTCGCTTTTGCTTTC-AAAA-TCTCATTCTATC 178
Query 160 ACTTTGTTCCCTTTTTTAACAATCGCGAAAAACCTCTAAATCGCTTCCCTTCAATTTCTG 219
|||||| | ||||||||| | |||||||||||||||| |||||| |||||| | ||||||
Sbjct 179 ACTTTG-TGCCTTTTTTAGCCATCGCGAAAAACCTCTGAATCGCATCCCTTGATTTTCTG 237
Query 220 GGTTT-TCAATTT-T-CACTTGGAGATTTTGGGGGAATTGTTTG-TGTT-GTTTACAAGA 274
||||| | | ||| | | |||| | || || ||||||| | || | ||| |||
Sbjct 238 GGTTTGTGACTTTGTGTA-GTGGA-A-ATTAGGCTTGTTGTTTGAT-TTCG-CTACGAGA 292
Query 275 AAATGGACAAGTACGAGCTTGTTAAAGACATCGGTGCTGGGAATTTTGGAGTGGCTAGGC 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 293 AAATGGACAAGTACGAGCTTGTTAAAGACATCGGTGCTGGGAATTTTGGAGTGGCGAGGC 352
Query 335 TCATGAGAGTCAAAAACTCCAAAGAACTCGTTGCTATGAAGTACATCGAGCGTGGCCCAA 394
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct 353 TCATGAGAGTCAAAAACTCCAAGGAACTCGTTGCTATGAAGTACATCGAGCGTGGACCTA 412
Query 395 AGATTGATGAGAACGTGGCGAGAGAGATTATTAATCATAGATCACTTCGTCATCCCAATA 454
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 413 AGATTGATGAGAACGTGGCGAGAGAGATTATTAACCACAGATCACTTCGTCATCCCAATA 472
Query 455 TAATCCGGTTTAAGGAGGTGGTTTTGACACCAACACACATCGCCATTGCTATGGAATTTG 514
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 473 TTATCCGGTTTAAGGAGGTGGTTTTGACACCAACGCACATCGCCATTGCTATGGAATATG 532
Query 515 CTGCTGGCGGTGAGTTATTTGAGCGTATATGTAGTGCTGGAAGATTCAGTGAGGATGAGG 574
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 533 CTGCTGGCGGTGAGCTATTTGAGCGTATATGTAGCGCTGGAAGATTCAGTGAGGATGAGG 592
Query 575 CAAGATACTTTTTCCAGCAGCTTATATCTGGAGTCAGCTATTGCCATGCTATGCAAATAT 634
||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct 593 CAAGATACTTTTTCCAGCAGCTTATCTCAGGAGTCAGCTATTGTCATGCTATGCAAATAT 652
Query 635 GCCATAGAGATCTGAAGCTCGAAAATACCCTCTTGGATGGAAGTCCTGCTCCACGCCTGA 694
|||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 653 GCCACAGAGATCTGAAGCTTGAAAATACCCTCTTAGATGGAAGTCCTGCTCCACGCCTGA 712
Query 695 AAATCTGTGATTTTGGTTATTCCAAGTCCTCACTGTTGCACTCTATGCCCAAATCAACTG 754
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 713 AGATCTGTGATTTTGGTTATTCCAAGTCCTCACTGTTGCACTCTATGCCCAAATCAACTG 772
Query 755 TTGGAACTCCAGCATATATTGCACCTGAGGTTCTTTCTCGCGGAGAGTATGATGGCAAGA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 TTGGAACTCCAGCATATATTGCACCTGAGGTTCTTTCTCGCGGAGAGTATGATGGCAAGA 832
Query 815 TGGCTGATGTATGGTCTTGTGGTGTGACTCTTTATGTCATGCTGGTGGGAGCATACCCAT 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 833 TGGCTGATGTATGGTCTTGTGGTGTGACTCTTTATGTCATGCTGGTGGGAGCATACCCAT 892
Query 875 TTGAAGACCAAGAGGATCCTAAAAACTTCaaaaaaaCAATACAAAGAATAATGGCTGTCA 934
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 893 TTGAAGACCAAGAGGATCCCAAAAACTTCAAAAAAACAATACAAAGAATAATGGCTGTCA 952
Query 935 AGTACAAGATCCCGGACTATGTCCATATCTCACAAGATTGCAAACATCTCCTCTCCCGTA 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 AGTACAAGATCCCGGACTATGTCCATATCTCACAAGATTGCAAACATCTCCTCTCCCGTA 1012
Query 995 TATTTGTCGCCAACTCGAATAAGAGGATTAAGATAGCTGAGATCAAGAAACATCCATGGT 1054
|||||||| ||||||||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct 1013 TATTTGTCACCAACTCGAATAAGAGGATTACGATAGGTGACATCAAGAAACATCCATGGT 1072
Query 1055 TCCTAAAGAACCTGCCAAGGGAACTTACAGAAACAGCTCAAGCTGTATACTTCAGTAAAG 1114
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||
Sbjct 1073 TCCTAAAGAACCTGCCAAGGGAACTTACAGAAATAGCTCAAGCTGCATACTTCAGGAAAG 1132
Query 1115 AGAACCCGACATTCTCGCTCCAAAGTGTCGAAGAGATCATGAAGATTGTGGAAGAGGCAA 1174
|||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1133 AGAACCCGACATTCTCACTCCAAAGCGTCGAAGAGATAATGAAGATTGTGGAAGAGGCAA 1192
Query 1175 AAACTCCAGCTCCTGTTTCTCGATCGATTGGAGCATTTGGGTGGGGAGGAGAAGAAGATG 1234
|||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 1193 AAACTCCAGCTCGTGTTTCTCGGTCGATTGGAGCATTTGGGTGGGGAGGAGGAGAAGATG 1252
Query 1235 CCGAGGGCATGGAGGAAGA-G--G---------TTGAGGAAGTAGAAGAAGA-------- 1274
||||||||| ||||||||| | | |||||||||||||||||||
Sbjct 1253 CCGAGGGCAAGGAGGAAGATGCAGAGGAAGAAGTTGAGGAAGTAGAAGAAGAAGAAGACG 1312
Query 1275 -------TGAGTATGATAAGACAGTGAAGCAAGTGCATGCTAGCATGGGAGAAGTCCGAG 1327
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1313 AAGAAGATGAGTATGATAAGACGGTGAAGCAAGTGCATGCTAGCATGGGAGAAGTCCGAG 1372
Query 1328 TCAGTTAAAACACAATATAAGATTGGTTTTGTTTTCAAGAAAGTTTTCTAAAACCaaaaa 1387
|||||||||| | || | | ||||| |||| |||||| |||||| |||||||||||||||
Sbjct 1373 TCAGTTAAAA-A-AA-A-A-GATTGATTTTCTTTTCACGAAAGTATTCTAAAACCAAAAA 1427
Query 1388 aaaa-GAAAGAAAAGGTTTTCGTTGGTCTGTCGAATTTGTCTCTTGCTCTCTGTTGAGTT 1446
|||| |||| ||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1428 AAAAAGAAAAAAAAG-TTTTCGTTGGTCTGTCGAATTTGTCTCTTGCTCTGTGTTGAGTT 1486
Query 1447 -TTA 1449
|||
Sbjct 1487 CTTA 1490
> AT1G10940.2 | Symbols: | Protein kinase superfamily protein
| chr1:3655813-3658608 REVERSE LENGTH=1791
Length=1791
Score = 1064 bits (576), Expect = 0.0
Identities = 871/1009 (86%), Gaps = 38/1009 (4%)
Strand=Plus/Plus
Query 276 AATGGACAAGTACGAGCTTGTTAAAGACATCGGTGCTGGGAATTTTGGAGTGGCTAGGCT 335
|||||||||||||||||| || |||||||| |||||||||||||||||||| || |||||
Sbjct 438 AATGGACAAGTACGAGCTGGTGAAAGACATAGGTGCTGGGAATTTTGGAGTTGCCAGGCT 497
Query 336 CATG-AGAGTCAAAAACTCCAAAGAACTCGTTGCTATGAAGTACATCGAGCGTGGCCCAA 394
|||| || ||||||||||| || ||||| ||||| |||||||||||||||||||| || |
Sbjct 498 CATGAAG-GTCAAAAACTCTAAGGAACTTGTTGCCATGAAGTACATCGAGCGTGGTCCTA 556
Query 395 AGATTGATGAGAACGTGGCGAGAGAGATTATTAATCATAGATCACTTCGTCATCCCAATA 454
||||||||||||| ||||| |||||||| |||||||| ||||||||||| ||||| ||||
Sbjct 557 AGATTGATGAGAATGTGGCAAGAGAGATCATTAATCACAGATCACTTCGCCATCCGAATA 616
Query 455 TAATCCGGTTTAAGGAGGTGGTTTTGACACCAACACACATC--GCCATTGCTATGGAATT 512
|||||||||| ||||||||||| ||||| ||||| | |||| |||||||| |||||||
Sbjct 617 TAATCCGGTTCAAGGAGGTGGTGTTGACTCCAAC-C-CATCTTGCCATTGCCATGGAATA 674
Query 513 TGCTGCTGGCGGTGAGTTATTTGAGCGTATATGTAGTGCTGGAAGATTCAGTGAGGAT-- 570
||||||||| ||||| |||| ||||||||||| |||||||||||||| |||||||||
Sbjct 675 TGCTGCTGGTGGTGAACTATTCGAGCGTATATGCAGTGCTGGAAGATTTAGTGAGGATGA 734
Query 571 ----G-A-GG--C-A-AG-----AT-----A-CTTT-TTCCAGCAGCTTATATCTGGAGT 608
| | || | | || || | ||| ||||||||||||||||| || ||
Sbjct 735 GGAGGAAGGGAACAAGAGAAAACATGCGAGATATTTCTTCCAGCAGCTTATATCAGGTGT 794
Query 609 CAGCTATTGCCATGCTATGCAAATATGCCATAGAGATCTGAAGCTCGAAAATACCCTCTT 668
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 795 TAGCTATTGCCATGCTATGCAAATATGCCATAGAGATCTGAAGCTCGAGAATACGCTCTT 854
Query 669 GGATGGAAGTCCTGCTCCACGCCTGAAAATCTGTGATTTTGGTTATTCCAAGTCCTCACT 728
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 855 GGATGGAAGTCCTGCTCCACGTCTGAAAATCTGTGATTTTGGTTATTCCAAGTCCTCTCT 914
Query 729 GTTGCACTCTATGCCCAAATCAACTGTTGGAACTCCAGCATATATTGCACCTGAGGTTCT 788
| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 915 GCTGCACTCTAGGCCCAAATCAACAGTTGGAACTCCAGCATATATTGCACCTGAGGTCCT 974
Query 789 TTCTCGCGGAGAGTATGATGGCAAGATGGCTGATGTATGGTCTTGTGGTGTGACTCTTTA 848
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 TTCTCGAAGAGAATATGATGGCAAGATGGCTGATGTATGGTCTTGTGGTGTGACTCTTTA 1034
Query 849 TGTCATGCTGGTGGGAGCATACCCATTTGAAGACCAAGAGGATCCTAAAAACTTCaaaaa 908
|||||||||||| ||||||||||||||||||||||| || || || || ||||||| ||
Sbjct 1035 TGTCATGCTGGTTGGAGCATACCCATTTGAAGACCAGGAAGACCCCAAGAACTTCAGGAA 1094
Query 909 aaCAATACAAAGAATAATGGCTGTCAAGTACAAGATCCCGGACTATGTCCATATCTCACA 968
||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct 1095 AACAATACAAAAAATAATGGCTGTCCAGTACAAGATCCCGGACTACGTCCATATCTCACA 1154
Query 969 AGATTGCAAACATCTCCTCTCCCGTATATTTGTCGCCAACTCGAAT-AAGAGGATTAAGA 1027
||||| ||| ||||||| |||||||||||||||||||| || | | |||||||| | |
Sbjct 1155 GGATTGTAAAAATCTCCTTTCCCGTATATTTGTCGCCAATTC-ACTCAAGAGGATCACCA 1213
Query 1028 TAGCTGAGATCAAGAAACATCCATGGTTCCTAAAGAACCTGCCAAGGGAACTTACAGAAA 1087
| || || |||||||||||| |||||||||||||||| ||||||||||||| ||||| |
Sbjct 1214 TTGCAGAAATCAAGAAACATTCATGGTTCCTAAAGAATTTGCCAAGGGAACTCACAGAGA 1273
Query 1088 CAGCTCAAGCTGTATACTTCA-GTAAAGAGAACCCGACATTCTCGCTCCAAAGTGTCGAA 1146
|||||||||||| ||| |||| | ||||||||||| || ||||| || || | || |||
Sbjct 1274 CAGCTCAAGCTGCATATTTCAAG-AAAGAGAACCCAACCTTCTCCCTTCAGACCGTTGAA 1332
Query 1147 GAGATCATGAAGATTGTGGAAGAGGCAAAAACTCCAGC-TCCTGTTTCTCGATCGATTGG 1205
|||||||||||||| |||| || || ||||| || || ||||||||| ||||| || ||
Sbjct 1333 GAGATCATGAAGATAGTGGCTGACGCCAAAACACC-GCCTCCTGTTTCCCGATCCATCGG 1391
Query 1206 AGCATTTGGGTGGGGAGGAGAA-GAAGATGCCGAGGGCATGGAGGAAGA 1253
|| ||||| ||||||||| || | ||||| || || | ||||||||
Sbjct 1392 AGGTTTTGGCTGGGGAGGA-AATGGGGATGCAGATGGAAAAGAGGAAGA 1439
> AT5G08590.1 | Symbols: ASK2, SNRK2-1, SNRK2.1, SRK2G | SNF1-related
protein kinase 2.1 | chr5:2783331-2786094 FORWARD LENGTH=1493
Length=1493
Score = 525 bits (284), Expect = 5e-148
Identities = 733/943 (78%), Gaps = 58/943 (6%)
Strand=Plus/Plus
Query 273 GAAA-ATGGACAAGTACGAGC-TTGTTAAAGA-CATCGGTGCTGGGAATTTTGGAGTGGC 329
|||| ||||||||||| || | |||| || || | | || ||||| ||||| || |||||
Sbjct 202 GAAATATGGACAAGTATGA-CGTTGTCAAGGATC-TGGGAGCTGGAAATTTCGGTGTGGC 259
Query 330 TAGGC-TCATGAGAGTCA-AA-AACTCCAAAGAACTCGTTGCTATGAAGTACATCGAGCG 386
| | | || | || | || || || ||||||| || ||||| ||||| ||||||||| |
Sbjct 260 TCGCCTTC-TCAG-G-CACAAGGACACCAAAGAGCTTGTTGCCATGAAATACATCGAGAG 316
Query 387 TGG-CCCAAAGATTGATGAGAACGTGGCGAGAGAGATTATTAATCATAGATCACTTCGTC 445
|| | | ||||| |||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 317 AGGTCGC-AAGATAGATGAGAACGTGGCGAGAGAGATTATTAATCACAGATCACTTAAAC 375
Query 446 ATCCCAATATAATCCGGTTTAAGGAGGTGGTTTTGACACCAACACA-CATCGCCATTGCT 504
|||| ||||| |||||||| ||||||||| | ||||||| || || | | || |||| |
Sbjct 376 ATCCTAATATCATCCGGTTCAAGGAGGTGATCCTGACACCTACTCATCTT-GCTATTG-T 433
Query 505 -ATGGAATTTGCTGCTGGCGGTGAGTTATTTGAGCGTATATGTAGTGCTGGAAGATTCAG 563
||||| | |||| |||| || ||| | ||||| || || |||| ||| || ||||| ||
Sbjct 434 GATGGAGTATGCTTCTGGAGGAGAGCTCTTTGATCGAATCTGTACTGCCGGTAGATTTAG 493
Query 564 TGAGGATGAGGCAAGATACTT-TTTCCAGCAGCTTATATCTGGAGTCAGCT-ATTGCCAT 621
||| | |||||| || ||||| |||| | ||||| || | ||| || | | | ||||||
Sbjct 494 TGAAGCTGAGGCTAGGTACTTCTTTCAA-CAGCTGATTTGTGGTGTT-GATTACTGCCAT 551
Query 622 GC-TATGCAAATATGCCATAGAGATCTGAAGCTCGAAAATACCCT-CTTGGATGGAAGTC 679
| | |||||||||| |||||||| |||||||| || || || || || | |||| || |
Sbjct 552 TCCT-TGCAAATATGTCATAGAGACCTGAAGCTTGAGAACACACTGCTCG-ATGGGAGCC 609
Query 680 CTGCTCCACGCCTGAAAATCTGTGATTTTGGTTATTCCAAGTCCTC-ACTGTTGCACTCT 738
||||||| | |||||||||||||||||||||| || ||||| || | | | || |||
Sbjct 610 CTGCTCCGCTTTTGAAAATCTGTGATTTTGGTTACTCTAAGTCATCTA-TACTACATTCT 668
Query 739 ATGCCCAAATCAACTGTTGGAACTCCAGCATATATTGCACCTGAGGTTCTTTCTCGCG-G 797
| ||| ||||||||||||||||||||||| || || |||||||| |||||||| || | |
Sbjct 669 AGGCCTAAATCAACTGTTGGAACTCCAGCTTACATAGCACCTGAAGTTCTTTCACG-GAG 727
Query 798 AGAGTATGATGGCAAG-ATGGCTGATGTATGGTCTTGTGGTGTGACTCTTTATGTCATGC 856
||| |||||||||||| | | | ||||| ||||| ||||| || || |||||||| ||||
Sbjct 728 AGAATATGATGGCAAGCACG-CGGATGTGTGGTCATGTGGAGTAACCCTTTATGTGATGC 786
Query 857 TGGTGGGAGCATACCCATTTGAAGACCA-AGAGGATCCTAAAAACTTCaaaaaaaCAATA 915
|||||||||| ||||| ||||| |||| | | ||||| |||||||||| ||||||||
Sbjct 787 TGGTGGGAGCTTACCCGTTTGAGGACCCTA-ATGATCCAAAAAACTTCAGGAAAACAATC 845
Query 916 CAAAGAATAATGGCTGT-CAAGTACAAGATCCCGGACTATGT-C-CATATCTCACAAGAT 972
|| | ||||||||||| ||| |||||||||||||||||||| | ||||||||| | ||
Sbjct 846 CAGCGCATAATGGCTGTACAA-TACAAGATCCCGGACTATGTTCACATATCTCAGGA-AT 903
Query 973 TGCAAACATCTCCTCTCCCGTATATTTGTCGCCAACTC-GAATAAGAGGATTA-AGATA- 1029
|||||||||| ||||| || ||||| ||| | ||||| | |||||| || | | ||
Sbjct 904 -GCAAACATCTTCTCTCTCGCATATTCGTCACTAACTCTGC-TAAGAGAATCACACTTAA 961
Query 1030 GCTGAGATCAAGAAACATCCATGGTTCCTAAAGAACCTGCCAAGGGAACTTAC-AGAAAC 1088
| ||||||||||| ||||| |||| | | ||||| |||||| ||| || | ||| |
Sbjct 962 G--GAGATCAAGAATCATCCGTGGTACTTGAAGAATTTGCCAAAGGAGCTG-CTAGAGTC 1018
Query 1089 AGCTCAAGCTGTATACTTCAGTAA-AGAGA-ACCCGACATTCTCGCTCCAAAGTGTCGAA 1146
|||||||| | || || | || ||||| || | | ||||| || ||||| || ||
Sbjct 1019 GGCTCAAGCGGCGTA-TT-AC-AAGAGAGACACAAG-C-TTCTCTCTTCAAAGCGTAGAG 1073
Query 1147 GAGATCATGAAGATTGT-GGAAGAGGCAAA-AACTCCAGCTCC 1187
|| || |||||||| || ||| || |||| || |||||||||
Sbjct 1074 GACATAATGAAGATAGTTGGA-GAAGCAAGGAA-TCCAGCTCC 1114
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78262649655
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5