BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475341 Length=532 Score E Sequences producing significant alignments: (Bits) Value AT1G59730.1 | Symbols: ATH7, TH7 | thioredoxin H-type 7 | chr1:... 802 0.0 > AT1G59730.1 | Symbols: ATH7, TH7 | thioredoxin H-type 7 | chr1:21952634-21953456 REVERSE LENGTH=579 Length=579 Score = 802 bits (434), Expect = 0.0 Identities = 505/538 (94%), Gaps = 9/538 (2%) Strand=Plus/Plus Query 1 CACTAGCAAATAAATGAATATCATTTCTCCATACAGACACATTCGGAAGACAATGGGTTC 60 ||||||||||||| |||| | ||||||| |||||| |||||||| ||||| ||||||||| Sbjct 13 CACTAGCAAATAAGTGAACACCATTTCTTCATACATACACATTCCGAAGATAATGGGTTC 72 Query 61 CAATGTTTCATCTGTGCATGATGTTCATTCATCAATGG-AA--ACCAACAATGGATTGGT 117 |||||||||||||||||||||||||||||||||||||| || |||| |||||||| || Sbjct 73 CAATGTTTCATCTGTGCATGATGTTCATTCATCAATGGAAATTACCAGTAATGGATTTGT 132 Query 118 TGTGGAAATCGAATCAAGAAGACAATGGAAATCTCTCTTTGATTCCATGAAAGGCTCAAA 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 133 TGTGGAAATCGAATCAAGAAGACAATGGAAATCTCTCTTTGATTCCATGAAAGGCTCAAA 192 Query 178 CAAATTGCTAGTAATTGATTTTACAGCTGCATGGTGTGGGCCTTGTAAAGCAATGGAACC 237 ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| Sbjct 193 CAAATTGCTAGTAATTGATTTCACAGCTGTATGGTGTGGACCTTGTAAAGCAATGGAACC 252 Query 238 TAGAGTTAAGGAGATTGCTTCAAAGTACCCAGAAGCTGTGTTTTCTAGGGTTGATGTGGA 297 |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 253 TAGAGTTAGGGAGATTGCTTCAAAGTACTCAGAAGCTGTGTTTGCTAGGGTTGATGTGGA 312 Query 298 TAGGCTAATGGATGTGGCTGGGACATATAGAGCTATTACACTTCCAGCTTTTGTTTTTGT 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 313 TAGGCTAATGGATGTGGCTGGGACATATAGAGCTATTACACTTCCAGCTTTTGTTTTTGT 372 Query 358 GAAGAGAGGAGAAGAGATTGATAGGGTTGTTGGAGCCAAACCTGATGAGCTCGTGAAGAA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 373 GAAGAGAGGAGAAGAGATTGATAGGGTTGTTGGAGCCAAACCTGATGAGCTCGTGAAGAA 432 Query 418 GATTGAAAAACATAGGGTTTAAGATTTGT-TTTTCCCCTTACAAAACAAAAGATTAT-A- 474 ||||||| ||||||||||||||| ||| | ||||||| |||||||| ||| |||||| | Sbjct 433 GATTGAACAACATAGGGTTTAAGTTTTTTCTTTTCCC-TTACAAAA-AAATGATTATTAT 490 Query 475 -Cttttgaatgtgtgttgtgaattgattgtttgaagttgagtttttggtttgttgttt 531 ||||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||| Sbjct 491 ACTTTTGAATGTCTGTTCTGAATTGATTGTTTGAAGTTGGGTTTCTGGTTTGTTGTTT 548 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25468712529 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5