BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475445 Length=2047 Score E Sequences producing significant alignments: (Bits) Value AT1G58290.1 | Symbols: HEMA1 | Glutamyl-tRNA reductase family p... 3206 0.0 AT1G09940.1 | Symbols: HEMA2 | Glutamyl-tRNA reductase family p... 1227 0.0 > AT1G58290.1 | Symbols: HEMA1 | Glutamyl-tRNA reductase family protein | chr1:21623726-21626200 REVERSE LENGTH=2083 Length=2083 Score = 3206 bits (1736), Expect = 0.0 Identities = 1973/2081 (95%), Gaps = 41/2081 (2%) Strand=Plus/Plus Query 1 AGCCTCAAATCTGACAAATCATCA-TCACAACGATCTCTCCTTCTTCCACATCGCAACCC 59 |||||||||||||||||||||| | ||||| ||| |||||||||||||||||||||||| Sbjct 1 AGCCTCAAATCTGACAAATCAT-ATTCACAGCGA--TCTCCTTCTTCCACATCGCAACCC 57 Query 60 AATCCCTCTCTG--TC-T-C-GAATCCTGA-TCTCTCTCTCAAGGGTTTGGTTTTTTGGA 113 |||||||||||| || | | ||| || | |||||||| ||| |||||||||||||| | Sbjct 58 AATCCCTCTCTGTCTCTTCCTCAATTCTTATTCTCTCTCGCAAAGGTTTGGTTTTTTGAA 117 Query 114 GACAAAGAGAGGAGATTTGAGA-TTTGGGTTTCAATGGCGGTTTCAAGTGCTTTCGTTGG 172 ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 118 GAC--AGAGAGGAGATTTGAGATTTTGGGTTTCAATGGCGGTTTCAAGTGCTTTCGTTGG 175 Query 173 TTGTCCAAAGCTTGAGACTTTATTGAATCACCATAATCTATCT-C--CTTCTTC-TC--C 226 ||||||||||||||||||||||||||||||||||||||||||| | ||||||| || | Sbjct 176 TTGTCCAAAGCTTGAGACTTTATTGAATCACCATAATCTATCTCCTTCTTCTTCTTCTTC 235 Query 227 GTCCTCTGTTTCACAGACACCATTGGGTCTTAATGGGGTTCGTG----T----------- 271 |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 236 GTCCTCTGTTTCACAGACACCATTGGGTCTTAATGGGGTTCGTGTTCTTCCGAAGAACAA 295 Query 272 TAGAACCAGACGAGGTTTGATCCAAAAAGCTCGTTGTGAGCTCTCTG---CTTCTGATTC 328 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 296 TAGAACCAGACGAGGTTTGATCCAAAAAGCTCGTTGTGAGCTCTCTGCTTCTTCTGATTC 355 Query 329 TGCTTCTAATGCTGCAAGCATCTCTGCTCTTGAACAACTCAAGAACTCTGCAACTGATAG 388 ||| |||||||| || |||||||||||||||||||||||||||||||||||| ||||| | Sbjct 356 TGCGTCTAATGCAGCTAGCATCTCTGCTCTTGAACAACTCAAGAACTCTGCAGCTGATCG 415 Query 389 ATATACAAAGGAAAGAAGCAGTATTGTTGTGATTGGACTTAGTATTCACACAGCTCCTGT 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 416 ATATACAAAGGAAAGAAGCAGTATTGTTGTGATTGGACTTAGTATTCACACAGCTCCTGT 475 Query 449 TGAGATGCGTGAGAAGCTTGCTATACCAGAAGCTGAATGGCCAAGAGCTATTGCTGAATT 508 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 476 TGAGATGCGTGAGAAGCTTGCTATACCTGAAGCTGAATGGCCAAGAGCTATTGCTGAATT 535 Query 509 GTGCGGTTTGAATCATATCGAAGAAGCTGCGGTGCTTAGTACTTGTAATCGTATGGAGAT 568 ||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct 536 GTGTGGTTTGAATCATATTGAAGAAGCTGCTGTGCTTAGTACTTGTAACCGTATGGAGAT 595 Query 569 TTATGTTTTAGCTTTATCTCAGCATCGTGGAGTTAAAGAAGTGACTGAGTGGATGTCAAA 628 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 596 TTATGTTTTAGCTTTATCTCAGCATCGTGGAGTTAAAGAAGTTACTGAATGGATGTCAAA 655 Query 629 GACGAGTGGGATCCCTGTTTCGGAGATTTGTGAGCACCGTTTTCTGTTGTACAACAAGGA 688 ||||||||||||||| ||||| ||||||||| | |||||||||||||||||||||||||| Sbjct 656 GACGAGTGGGATCCCAGTTTCAGAGATTTGTCAACACCGTTTTCTGTTGTACAACAAGGA 715 Query 689 TGCTACACAGCATATATTTGAAGTCTCAGCTGGTCTTGACTCTCTTGTCCTAGGAGAAGG 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 716 TGCTACACAGCATATATTTGAAGTCTCAGCTGGTCTTGACTCTCTTGTCCTAGGAGAAGG 775 Query 749 TCAGATTCTTGCACAGGTGAAACAAGTTGTGAAAGTTGGCCAAGGAGTGAATGGCTTTGG 808 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 776 TCAGATCCTTGCACAGGTGAAACAAGTTGTGAAAGTTGGTCAAGGAGTGAATGGCTTTGG 835 Query 809 GAGGAATATCAGCGGGTTGTTTAAACACGCGATAACTGTTGGTAAGCGTGTTAGAACAGA 868 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 836 GAGGAATATCAGCGGGCTGTTTAAACACGCGATAACTGTTGGTAAGCGTGTTAGAACAGA 895 Query 869 GACAAACATTGCTTCTGGGGCGGTTTCGGTTAGCTCAGCTGCTGTTGAACTTGCTCTGAT 928 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 896 GACAAATATTGCTTCTGGTGCGGTTTCGGTTAGCTCAGCTGCTGTTGAACTTGCTCTGAT 955 Query 929 GAAGCTTCCGCAATCTTCACACGCATCTGCTAGGATGTGTGTAATTGGCGCTGGAAAAAT 988 |||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 956 GAAGCTTCCGCAGTCTTCAAACGTATCTGCTAGGATGTGTGTAATTGGCGCTGGAAAAAT 1015 Query 989 GGGGAAGCTTGTGATTAAGCATATGATGGCTAAGGGTTGCACAAAAGTGGTGGTGGTCAA 1048 |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 1016 GGGGAAGCTTGTGATTAAGCATTTGATGGCTAAGGGTTGCACAAAAGTGGTGGTAGTCAA 1075 Query 1049 CAGAAGTGAAGAGAGAGTTTCAGCTATTCGTGAGGAGATGCCGGGTATTGAGATTATATA 1108 ||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 1076 CAGAAGTGAAGAGAGGGTTTCAGCTATCCGTGAGGAGATGCCTGGTATTGAGATTATATA 1135 Query 1109 TCGACCTCTTGATGAGATGCTAGCTTGTGCTGCAGAAGCGGATGTTGTGTTTACCAGCAC 1168 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1136 TCGACCTCTTGATGAGATGCTAGCTTGTGCTTCAGAAGCGGATGTTGTGTTTACCAGCAC 1195 Query 1169 AGCTTCTGAGACGCCATTGTTCTTAAAGGAGCATGTGGAGACTCTCCCTCAAGCTTCTCC 1228 ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct 1196 AGCCTCTGAGACGCCATTGTTCTTAAAGGAGCATGTAGAGAATCTCCCTCAAGCTTCTCC 1255 Query 1229 AGAGGTTGGAGGACTGAGGCTTTTTGTTGACATCTCTGTTCCGAGAAATGTCGGATCTTG 1288 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct 1256 AGAGGTTGGAGGACTGAGGCATTTTGTTGACATCTCTGTTCCGAGAAATGTTGGATCTTG 1315 Query 1289 TGTTGGTGAAGTAGAAACCGCGCGGGTTTACAATGTGGACGATCTCAAAGAAGTTGTTGC 1348 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1316 TGTTGGTGAAGTAGAAACAGCACGGGTTTACAATGTGGACGATCTCAAAGAAGTTGTTGC 1375 Query 1349 TGCCAACAAAGAAGACAGGTTGAGGAAAGCAATGGAAGCTCAAACCATAATCACAGAGGA 1408 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1376 TGCCAACAAAGAAGACAGGATGAGGAAAGCAATGGAAGCTCAAACCATAATCACAGAGGA 1435 Query 1409 ATCCACACAGTTTGAAGCATGGAGGGATTCATTGGAGACGGTTCCAACGATCAAGAAGTT 1468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1436 ATCCACACAGTTTGAAGCATGGAGGGATTCATTGGAGACGGTTCCAACGATCAAGAAGTT 1495 Query 1469 AAGAGCTTATGCAGAGAGAATCAGAGTGGCAGAGCTAGAGAAGTGCATGTCCAAAATGGG 1528 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1496 AAGAGCTTATGCAGAGAGAATCAGAGTGGCAGAGCTCGAGAAGTGCATGTCCAAAATGGG 1555 Query 1529 AGATGACATCAACAAGAAAACAACAAGAGCGGTTGATGACTTAAGCCGAGGTATTGTGAA 1588 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1556 AGATGATATCAACAAGAAAACAACGAGAGCGGTTGATGACTTAAGCCGAGGTATCGTGAA 1615 Query 1589 CAGATTCTTACATGGTCCAATGCAGCATTTGAGATGTGACGGGAGTGATAGTAGAACGCT 1648 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 1616 CAGATTCTTACATGGTCCAATGCAGCATTTGAGATGTGACGGAAGTGACAGTAGAACGCT 1675 Query 1649 AAGCGAGACCCTTGAGAATATGCATGCTTTGAACAGAATGTACGGGCTTGAGAAAGACAT 1708 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1676 GAGCGAGACCCTTGAGAATATGCATGCTTTGAACAGAATGTACGGTCTTGAGAAAGACAT 1735 Query 1709 TTTGGAGGAAAAGCTTAAGGCAATGGCGGAACAACAACAGAAGTAAAAGAGAAAAAGA-G 1767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 1736 TTTGGAGGAAAAGCTTAAGGCAATGGCGGAACAACAACAGAAGTAAAAGAGAAAAATAAG 1795 Query 1768 AAGATGTTCATCTCTTTTGACAGATATAAGATTAGCTTCCCCGCAAACTC-GAGTAAATT 1826 |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||| Sbjct 1796 AAGATGTTCATCTCTTTTGACA--TATAAGATTAGCTTCCCCACAAACTCTGAGTAAATT 1853 Query 1827 GCATAGATCCTATAGCTATGGATCTATTTGATTCATTTAATTTGTGTGCAAGAGACTAAC 1886 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1854 GCATAGATCCTATAGCGATGGATCTATTTGATTCATTTAATTTGTGTGCAAGAGACTAAC 1913 Query 1887 ATTTCTATTGTCAAGTGTAAGTGTTGTGAAGCTATAAGCGAGCTTGTTGCATGTTTGTTG 1946 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1914 AATTCTATCGTCAAGTGTAAGTGTTGTGAAGCTATAAGCGAGCTTGTTGCATGTTTGTTG 1973 Query 1947 CTTCATAGACTCGAGTGTTACAGTATTGATCCAAGTACCGTTACATATTTGTAATAATGT 2006 |||||||||||||||||| | |||||| ||| |||| |||||||||| ||||||||||| Sbjct 1974 CTTCATAGACTCGAGTGTAATGGTATTGGTCCCAGTATCGTTACATATATGTAATAATGT 2033 Query 2007 ATAAACTTTGGTTCATGCAGTATAGAGAAATGtttttttCT 2047 |||||||||||||| |||| ||||||||||||||||||||| Sbjct 2034 ATAAACTTTGGTTCTTGCAATATAGAGAAATGTTTTTTTCT 2074 > AT1G09940.1 | Symbols: HEMA2 | Glutamyl-tRNA reductase family protein | chr1:3236995-3239554 REVERSE LENGTH=2114 Length=2114 Score = 1227 bits (664), Expect = 0.0 Identities = 1182/1428 (83%), Gaps = 52/1428 (4%) Strand=Plus/Plus Query 335 TAATGCTGCAAGCATCTCTGCTCTTGAACAACTCAAGAAC-TCTGCAACTGATAGATATA 393 ||| || || |||||||| ||||| || || |||||| || ||||| | ||| |||| | Sbjct 478 TAAGGCAGCTAGCATCTCAGCTCTCGAGCAGCTCAAG-ACTTCTGCTATTGACCGATACA 536 Query 394 CAAAGGAAAGAAGCAGTATTGTTGTGATTGGACTTAGTATTCACACAGCTCCTGTTGAGA 453 | |||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||| Sbjct 537 CTAAGGAAAGAAGCAGCATTGTGGTGATTGGGCTTAGCATTCACACAGCTCCTGTTGAGA 596 Query 454 TGCGTGAGAAGCTTGCTATACCAGAAGCTGAATGGCCAAGAGCTATTGCTGAATTGTGCG 513 |||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| | Sbjct 597 TGCGTGAGAAGCTTGCCATTCCAGAAGCTGAATGGCCACGAGCTATTGCTGAATTGTGTG 656 Query 514 GTTTGAATCATATCGAAGAAGCTGCGGTGCTTAGTACTTGTAATCGTATGGAGATTTATG 573 ||||||||||||| ||||||||||| || || ||||| || || || ||||||||||||| Sbjct 657 GTTTGAATCATATTGAAGAAGCTGCTGTACTCAGTACCTGCAACCGAATGGAGATTTATG 716 Query 574 TTTTAGCTTTATCTCAGCATCGTGGAGTTAAAGAAGTGACTGAGTGGATGTCAAAGACGA 633 |||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| | Sbjct 717 TTTTGGCTCTATCTCAGCATCGTGGAGTCAAAGAAGTGACTGAGTGGATGTCTAAGACAA 776 Query 634 GTGGGATCCCTGTTTCGGAGATTTGTGAGCACCGTTTTCTGTTGTACAACAAGGATG-CT 692 |||| ||||| ||||| || || ||| |||| |||||||| |||||||||||||||| | Sbjct 777 GTGGAATCCCGGTTTCAGAAATCTGTCAGCATCGTTTTCTATTGTACAACAAGGATGTC- 835 Query 693 ACACAGCATATATTTGAAGTCTCAGCTGGTCTTGACTCTCTTGTCCTAGGAGAAGGTCAG 752 || || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 836 ACGCAACATATATTTGAAGTCTCAGCTGGTCTAGACTCTCTTGTCCTAGGTGAAGGTCAG 895 Query 753 ATTCTTGCACAGGTGAAACAAGTTGTGAAAGTTGGCCAAGGAGTGAATGGCTTTGGGAGG 812 || ||||||||||| ||||||||||| ||||| || |||||||| ||||| ||||||||| Sbjct 896 ATACTTGCACAGGTTAAACAAGTTGTTAAAGTAGGTCAAGGAGTCAATGGTTTTGGGAGG 955 Query 813 AATATCAGCGGGTTGTTTAAACACGCGATAACTGTTGGTAAGCGTGTTAGAACAGAGACA 872 |||||||| ||| | ||||||||||| || || ||||| |||||||| |||||||||||| Sbjct 956 AATATCAGTGGGCTATTTAAACACGCAATCACAGTTGGAAAGCGTGTCAGAACAGAGACA 1015 Query 873 AACATTGCTTCTGGGGCGGTTTCGGTTAGCTCAGCTGCTGTTGAACTTGCTCTGATGAAG 932 || || ||| ||||||| ||||| |||||||| ||||| |||||||||||||| |||||| Sbjct 1016 AATATCGCTGCTGGGGCTGTTTCCGTTAGCTCGGCTGCAGTTGAACTTGCTCTCATGAAG 1075 Query 933 CTTCC-GCAATCTTCACACGCATC-T--GCTAGGATGTGTG-TAATTGGCGCTGGAAAAA 987 ||||| | ||||||| || ||||| | |||||||||| || || |||| |||||||| | Sbjct 1076 CTTCCCG-AATCTTCTCATGCATCATCTGCTAGGATGT-TGGTAGTTGGTGCTGGAAAGA 1133 Query 988 TGGGGAAGCTTGTGATTAAGCA-TATGATGGCTAAGGGTTGCAC-AAAAGTGGTGGTGGT 1045 ||||||||||||| || ||||| | || | ||||| |||||||| |||| ||||||| || Sbjct 1134 TGGGGAAGCTTGTAATCAAGCACT-TGGTTGCTAAAGGTTGCACCAAAA-TGGTGGTTGT 1191 Query 1046 CAA-CAGAAGTGAAGAGAGAGTTTCAGCTATTCGTGAGGAGATGCCG---GGTATTGAGA 1101 || | |||| ||||||| |||| ||||| | || | ||||||||| || |||||| Sbjct 1192 GAATC-GAAGCGAAGAGAAAGTTGCAGCTGTCCGCAATGAGATGCCGCCTGGCGTTGAGA 1250 Query 1102 TTATATATCGACCTCTTGATGAGATGCTAG-CTTGTGCTGCAGAAGCGGATGTTGTGTTT 1160 |||| ||| ||| |||||||||||||| | |||||||||||||||| ||||| || ||| Sbjct 1251 TTATTTATAAACCCCTTGATGAGATGCT-GTCTTGTGCTGCAGAAGCTGATGTAGTCTTT 1309 Query 1161 ACCAGCACAGCTTCTGAGACGCCATTGTTCTTAAAGGAGCATGTGGAGACTCTCCCTCAA 1220 || |||||||| |||||||| ||||| ||||| |||||||| || ||||||||||||| Sbjct 1310 ACTAGCACAGCATCTGAGACACCATTATTCTTGAAGGAGCAAGTAGAGACTCTCCCTCCT 1369 Query 1221 GCTTCTCCAGAGGTTGGAGGACTGAGGCTTTTTGTTGACATCTCTGTTCCGAGAAATGTC 1280 | || |||| | | | |||||| |||||||| ||||||||||| ||||||||| Sbjct 1370 G-TT----AGAGAT-G-----C-GAGGCTCTTTGTTGATATCTCTGTTCCTAGAAATGTC 1417 Query 1281 GGATCTTGTGTTGGTGAAGTAGAAACCG--CGCGGGTTTACAATGTGGACGATCTCAAAG 1338 || || || || | |||| |||| | | | ||||||| ||| ||||| || ||||| | Sbjct 1418 GGGTCCTGCGTCGCTGAAATAGA--CGGTACACGGGTTTTCAACGTGGATGACCTCAAGG 1475 Query 1339 AAGTTGTTGCTGCCAACAAAGAAGACAGGTTGAGGAAAGCAATGGAAGCTCAAACCATAA 1398 |||| |||||||| || |||||||||||| |||||||||||||||| ||||| | |||| Sbjct 1476 AAGTCGTTGCTGCGAATAAAGAAGACAGGGTGAGGAAAGCAATGGACGCTCAGGCTATAA 1535 Query 1399 TCACAGAGGAATCCACACAGTTTGAAGCATGGAGGGATTCATTGGAGACGGTTCCAACGA 1458 | ||||| ||||| | ||| |||||||| |||||||| || ||||||||||||||||| | Sbjct 1536 TTACAGATGAATCAAAACACTTTGAAGCGTGGAGGGACTCGTTGGAGACGGTTCCAACAA 1595 Query 1459 TCAAGAAGTTAAGAGCTTATGCAGAGAGAATCAGAG-TGGCAGAGCTAGAGAAGTGCATG 1517 ||||||| ||||| | ||| |||||||||| | || || ||||| | ||||| | | || Sbjct 1596 TCAAGAAATTAAGGGGATATACAGAGAGAATTATAGCTG-CAGAGATTGAGAAATCCTTG 1654 Query 1518 TCCAAAATGGGAGAT-GACATCAACAAGAAAACAAC-AAGAGCGGTTGATGA-CTTAAGC 1574 |||||||||| || ||||| |||||||| | | || | | || ||||| || || | Sbjct 1655 CCCAAAATGGGC-ATTGACATGAACAAGAAGATGAGGAAAA-CAGTAGATGATCT-AATC 1711 Query 1575 CGAGGTATTGTGAACA-GATTCTTACATGGTCCAATGCAGCATTTGAGATGTGACGGGAG 1633 |||||||| ||||||| | | || || ||||||||||||||||||||||| || |||| Sbjct 1712 CGAGGTATAGTGAACAAGCTCCTG-CACGGTCCAATGCAGCATTTGAGATGCGATGGGAA 1770 Query 1634 TGATAGTAGAACGCTAAGCGAGACCCTTGAGAATATGCATGCTTTGAACAGAATGTACGG 1693 ||||| |||||||| || ||||| || || || ||||| ||| ||||||| ||||| || Sbjct 1771 CGATAGCAGAACGCTGAGTGAGACACTAGATAACATGCAGGCTCTGAACAGGATGTATGG 1830 Query 1694 GCTTGA-GAAAGACATTTTGGAGGAAAAGCTTA-AGGCAATGGCGGAA 1739 ||||| | | || || | ||||| ||| ||| || ||| || |||| Sbjct 1831 ACTTGATGCA-GAGATACTCGAGGAGAAGATTAGAG-CAAAGGTGGAA 1876 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 101455301445 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5