BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475488 Length=1557 Score E Sequences producing significant alignments: (Bits) Value AT1G64890.1 | Symbols: | Major facilitator superfamily protein... 2126 0.0 > AT1G64890.1 | Symbols: | Major facilitator superfamily protein | chr1:24109542-24111400 FORWARD LENGTH=1774 Length=1774 Score = 2126 bits (1151), Expect = 0.0 Identities = 1375/1482 (93%), Gaps = 19/1482 (1%) Strand=Plus/Plus Query 3 CCAAAATATCTTCCAGAAATTTCCAATTTAACTCCGTACGACCCaaaaaaaaGGAAACTG 62 |||||||||||||||||||||| |||||||||||| |||| || |||| |||||||||| Sbjct 145 CCAAAATATCTTCCAGAAATTTTGAATTTAACTCCG-ACGA-CC-AAAAGAAGGAAACTG 201 Query 63 AACAAAGACAAT--G-AGCAGCAGCGATGA-TCATGCCGGAGAATCTCGTCATCGCCGTA 118 || ||||||||| | |||||||||||| | ||||||||||||||||||||||||||||| Sbjct 202 AA-AAAGACAATGAGCAGCAGCAGCGAT-ACTCATGCCGGAGAATCTCGTCATCGCCGTA 259 Query 119 ACCCGATCCGGTGGCTACTCGGCTTT-GGTTTCTTCGTACAAGGATTTAGAGGTTTCCCA 177 |||||||||||||||||||||| ||| |||||||||||||||||||| ||||| |||||| Sbjct 260 ACCCGATCCGGTGGCTACTCGG-TTTCGGTTTCTTCGTACAAGGATTCAGAGGATTCCCA 318 Query 178 TGGCTTGGAGCCAATTTCTTCCTCACAGATGAGCTCCGTGTAAATCCTTCAGTGCTTCAG 237 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 319 TGGCTTGGAGCCAATTTCTTCCTCACAGAACAGCTCCGTGTTAATCCTTCAGTGCTTCAG 378 Query 238 CTTCTTCAAAACTCAGCCAATCTTCCAATGGTCGCTAAACCAATCTACGGCGTCGTTTCA 297 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 379 CTTCTTCAAAACTCAGCCAATCTTCCAATGGTCGCTAAACCCATCTACGGCGTCGTTTCA 438 Query 298 GACTCTGTCTACTTCTTTGGCCAACATCGAATCCCTTACATCGCTATTGGAGCCTTGTTA 357 ||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| Sbjct 439 GACTCTGTCTACTTCTTTGGCCAACATCGAATCCCATACATCGCCGTTGGAGCTTTGTTA 498 Query 358 CAAGCAATCTCATGGCTAGCAATAGCTTTCTTGTCAAGATCCAATGTGTCAATTTTAGCT 417 |||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||| Sbjct 499 CAAGCAATCTCATGGCTAGCTATAGCATTCTTGTCAAGATCCAATGTATCAATCTTAGCT 558 Query 418 TTATCAATATATCTTCTTCTTAGTAATCTCGGTGCTTCCTTAGTGGAAGTAGCGAATGAT 477 ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 559 TTATCGATATATCTTCTCCTTAGTAATCTCGGTGCTTCCTTAGTAGAAGTAGCGAATGAT 618 Query 478 GCTATTGTTGCTGAGGCCGGAAAGCAAAAAATCTCAGAGACGCAATCCGGTGAGCTACCT 537 |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 619 GCTATTGTTGCTGAATCCGGAAAGCAAAAAACCTCAGAGACGCAATCCGGTGAGCTACCG 678 Query 538 TCGTTTGTTTGGATGGCTTCTTCTCTTGGTGGAATCTTGGGAAACCTTTTAGGTGGTATT 597 || ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| Sbjct 679 TCATTTGTTTGGATGGTTTCTTCTCTTGGTGGAATCTTAGGTAACCTTTTAGGTGGTATT 738 Query 598 GCTATTAAAACGATTTCTGCTCGGTCAACGTTCCTCGTGTTTGGGATTTTGGCTCTTCTT 657 ||||| |||||| |||| |||| ||||||||| || ||||||||||| |||||||||||| Sbjct 739 GCTATCAAAACGTTTTCAGCTCAGTCAACGTTTCTTGTGTTTGGGATCTTGGCTCTTCTT 798 Query 658 CAGTTCTTGGTAACTATAAACATCCGAGAAAAGTCTCTTAATCTTCCGGAAAATCCATCA 717 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 799 CAGTTCTTGGTAACTATAAACATCAGAGAAAAGTCTCTTAATCTTCCGGAAAATCCATCA 858 Query 718 CCAGCTGGT---ATTAGAAAACATCTCTCTGACCTTTCGCATGTGTTGAGGAAGCCCGAG 774 ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 859 CCAGCTGGTGGTATTAGGAAACATCTCTCTGATCTTTCGCATGTGTTGAGGAAGCCCGAG 918 Query 775 ATTTCTTTTTCCATAGCCTGGATCGCGTTATCAACCGCTGTAGTTCCTGTTCTGACTGGG 834 ||||||| ||| ||||| ||||||||| ||||||||||||| ||||| ||| |||| ||| Sbjct 919 ATTTCTTATTCGATAGCTTGGATCGCGGTATCAACCGCTGTGGTTCCGGTTTTGACAGGG 978 Query 835 ACAATGTTCTTTTACCAAACAAAGTTTCTGAAAATCGATGCATCACTTCTAGGGATCTCC 894 || ||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||| Sbjct 979 ACTATGTTTTTTTACCAAACAAAGTTTCTGAAGATTGATGCATCACTTTTAGGGATCTCC 1038 Query 895 AAGGTGTTTGGTCAAATTGCAATGCTT-TTATGGGGTTTTGCATACAATCGTTGGCTCAA 953 ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| || Sbjct 1039 AAGGTGTTTGGTCAAATTGCAATGCTTCTT-TGGGGTTTTGCATATAATCGTTGGCTAAA 1097 Query 954 ATCTGTACAGCCGAGGAAATTGATGACAGCTATTCAGGTAACAATAGCTTTCTTTGTGAT 1013 | || | | |||||||||| || ||||||| |||||||| || ||||||||||||||||| Sbjct 1098 AGCTATGCGGCCGAGGAAACTGCTGACAGCCATTCAGGTGACGATAGCTTTCTTTGTGAT 1157 Query 1014 ATCCGATCTCTTATTTGTGAGAGGCGTTTACCGGGATTTGGGAGTGTCAGACTCTGTATA 1073 |||||||||||| ||||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct 1158 ATCCGATCTCTTGTTTGTGAAAGGCGTGTACCGGGATTTGGGAGTGTCGGACTCTGTATA 1217 Query 1074 CGTACTCTTCTTTTCTGGATTCTTGGAAACTCTCTTTTACTTCAAGATTCTGCCGTTCAC 1133 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 1218 TGTACTCTTCTTTTCTGGATTCTTGGAAACTCTATTTTACTTCAAGATTCTGCCGTTTAC 1277 Query 1134 CGTCTTGATGGCCCGTCTCTGTCCTCCTGGATGTGAAGGGTCTCTCATGGCATTTGTCAT 1193 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1278 TGTCTTGATGGCTCGTCTCTGTCCTCCTGGATGTGAAGGGTCTCTCATGGCATTTGTCAT 1337 Query 1194 GTCAGCCATTGCACTTGCATTCATAGTTAGCGGATATCTTGGAATCATTCTCGCATCATT 1253 |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| || Sbjct 1338 GTCAGCCATTGCTCTTGCATTCATAGTTAGCGGATATCTTGGAATCGTTCTTGCATCGTT 1397 Query 1254 TGTCGGTGTAACAGTGGATGATTTCTCGGGGTTTACTCGTGGACTCGCTATAGAAGCGTT 1313 |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1398 TGTCGGTGTAACAGAGGATGATTTCTCGGGGTTTACTCGCGGACTCGCTATAGAAGCGTG 1457 Query 1314 CTGCGTTGGGATTCCGTTGATCTTAACTTCGTGGATATATAATGAAGCGGAAACAAAGGA 1373 |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| || Sbjct 1458 CTGCGTTGGGATTCCGTTGATCTTAACTTCTTGGATATATGATGAAGCGGAAACAAAAGA 1517 Query 1374 GAAAAGTAAAAAGATAGAATGAGTTCATTCGGGTTAAAGTGTACTTTGTATATCTTTGTG 1433 ||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| Sbjct 1518 GAAGAGTAAAAAGATAGAGTGAGTTCATTTGGGTTAATGTGTACTTTGTATATCTTTGTG 1577 Query 1434 ACATTCTTGTGGTTTTAAGGTTT--CGTAGTCTCTCTCTTTG 1473 ||||||||||| ||| | ||||| ||||||||||||| ||| Sbjct 1578 ACATTCTTGTGATTTGA-GGTTTTTCGTAGTCTCTCTCATTG 1618 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76857034395 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5