BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475565 Length=398 Score E Sequences producing significant alignments: (Bits) Value ATCG00470.1 | Symbols: ATPE | ATP synthase epsilon chain | chrC... 719 0.0 > ATCG00470.1 | Symbols: ATPE | ATP synthase epsilon chain | chrC:52265-52663 REVERSE LENGTH=399 Length=399 Score = 719 bits (389), Expect = 0.0 Identities = 395/398 (99%), Gaps = 0/398 (0%) Strand=Plus/Plus Query 1 ATGACCTTAAATCTTTGTGTACTGACTCCGAATCGAATTGTTTGGGATTCAGAAGTAAAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGACCTTAAATCTTTGTGTACTGACTCCGAATCGAATTGTTTGGGATTCAGAAGTAAAA 60 Query 61 GAAATCATTTTATCTACTAATAGTGGACAAATTGGTGTATTACCGAACCACGCGCCGATT 120 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 61 GAAATCATTTTATCTACTAATAGTGGACAAATTGGTGTATTAGCAAACCACGCGCCGATT 120 Query 121 GCCACAGCTGTTGATATAGGTATTTTGAAAATACGCCTTACTAACCAATGGTTAACGATG 180 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 121 GCCACAGCTGTTGATATAGGTATTTTGAAAATACGCCTTGCTAACCAATGGTTAACGATG 180 Query 181 GCTCTGATGGGCGGTTTTGCTAGAATAGGCAATAATGAAATCACTATTTTAGTAAATGAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GCTCTGATGGGCGGTTTTGCTAGAATAGGCAATAATGAAATCACTATTTTAGTAAATGAT 240 Query 241 GCAGAGAAGAATAGTGACATTGATCCACAAGAAGCTCAGCAAACTCTTGAAATAGCAGAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GCAGAGAAGAATAGTGACATTGATCCACAAGAAGCTCAGCAAACTCTTGAAATAGCAGAA 300 Query 301 GCTAACTTGAGAAAAGCTGAAGGTAAGAGACAGACAATTGAGGCTAATCTAGCTCTCAGA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GCTAACTTGAGAAAAGCTGAAGGTAAGAGACAGACAATTGAGGCTAATCTAGCTCTCAGA 360 Query 361 CGAGCTCGGACACGAGTCGAGGCTCTCAATACGATTTG 398 |||||||||||||||||||||||||||||||||||||| Sbjct 361 CGAGCTCGGACACGAGTCGAGGCTCTCAATACGATTTG 398 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18800138126 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5