BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475902 Length=1264 Score E Sequences producing significant alignments: (Bits) Value AT1G68160.1 | Symbols: | Protein of unknown function (DUF3755)... 1480 0.0 > AT1G68160.1 | Symbols: | Protein of unknown function (DUF3755) | chr1:25545808-25548894 REVERSE LENGTH=1451 Length=1451 Score = 1480 bits (801), Expect = 0.0 Identities = 1033/1141 (91%), Gaps = 31/1141 (3%) Strand=Plus/Plus Query 4 CAAGCTTTATCCATGGCGTAAGATGATTCACCTTCTCAAAGTTTG-TCTCTTTTTTCATA 62 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 134 CAAGCTTTATCCATGGCGTAAGATGATTCACCTTCTCAAAGTTTGATC-CTTTTTTCATA 192 Query 63 TCTGATCACAA-GAGGGTTTCGGGTTTGATTTCTGATTGTTAAAGTTTAAATATTTTTAG 121 |||||||| || ||| |||| ||||||||||||| ||||||||||||| | || ||| Sbjct 193 TCTGATCA-AAGGAGAGTTTTGGGTTTGATTTCTAATTGTTAAAGTTT-TA-ATCTTT-- 247 Query 122 TTGAAATTTGGGTTTAGGGTTTGATTATGTGGATGGCTAGTCAATCTAATTCTGGGTTCG 181 || |||||||||| | ||| ||||||||||||||||| |||||| ||||||||||||| Sbjct 248 TT---ATTTGGGTTT-GTGTTCGATTATGTGGATGGCTACTCAATCAAATTCTGGGTTCG 303 Query 182 AGTT-TTTGAATTCTATGATGAGTCGTCACGCTATTAATTTCCAATCTAACACCTCCTCG 240 | || ||||| |||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 304 A-TTCTTTGAGTTCTATGATGAGTCGTCACGCTATTAATTTCCAATCTAACACTTCTTCG 362 Query 241 GAGATGATTTCTATGAGTCCGTACTTGGGGATG---A-G--TATGATCAATGTTGCTTCT 294 ||||||| | | ||||||||||||||||||||| | | |||||||||||||| |||| Sbjct 363 GAGATGACTCCAATGAGTCCGTACTTGGGGATGAATATGAATATGATCAATGTTGGTTCT 422 Query 295 CCTGGTTTAGTTCAAACCGGGAATTCTTCGAATGCTTCTGATTCGGTTTCTGGCCTCATG 354 |||||||| |||||||||||||||||||||||| ||| ||||||| |||||| || | | Sbjct 423 CCTGGTTTTCTTCAAACCGGGAATTCTTCGAATGGTTCCGATTCGGGTTCTGGTCTAAAG 482 Query 355 CTTGATACTGCCATGGCTAGTGAATGGTCAAATGAAGAACAATACATATTGGATGATGGT 414 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 483 CTTGATACTTCCATGGTTAGTGAATGGTCAAATGAAGAACAATACATATTGGATGCTGGT 542 Query 415 CTTGAAAAATATAAGGATATACCAAGTATCGAGAGGTATGTTCAAATTGGAAACAGTTTA 474 |||||||||||||||||||| |||||||| || | |||| ||||||||||||||| |||| Sbjct 543 CTTGAAAAATATAAGGATATGCCAAGTATTGATATGTATATTCAAATTGGAAACACTTTA 602 Query 475 CCTGATAAAAGTGTTCGAGACATTGCTTTGCGGTGTATGTGGATGACTAGAAAGAGAAGA 534 |||||||||||| ||||||| |||||||||||||||| |||| ||| |||||||||||| Sbjct 603 CCTGATAAAAGTATTCGAGATATTGCTTTGCGGTGTAGGTGGCTGAGGAGAAAGAGAAGA 662 Query 535 AAATCAGAAGAATTAAATTGTGGAAGAAGAACGAGTTCTAGCAAGGACAAGCAGGTGGAA 594 ||||||||||||||||| |||||||||||| | ||||||||||||| ||||||||||||| Sbjct 663 AAATCAGAAGAATTAAACTGTGGAAGAAGAGCAAGTTCTAGCAAGGGCAAGCAGGTGGAA 722 Query 595 TCGTCTTCTAAGTCAAGCATTCCCTCTGTTTTGCCTCATAACATGGCTTCGTATCCTTTC 654 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 723 TCGTCGTCTAAGTCAAGCATTCCCTCTGTTTTGCCTCATAACATGGCTTCATATCCTTTC 782 Query 655 TCAGTGCCCTCTACAAGCACCAGTAAACAAATTACATCTGAAGATTTAAGTGGCCATGCA 714 |||| ||| |||||||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct 783 TCAGGGCCATCTACAAGCACCAGTAAACAAATTACGTCTGAAGATTTAAGTAGCTATGCA 842 Query 715 ATAAATCTCT-TAGAACAGAATGTACGAGCTTTTAGTCAAATTAGAGCTAATCTCTCCTC 773 | |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 843 ACAAATCT-TATAGAACAGAATGTACGAGCTTTTAGTCAAATTAGAGCTAATCTCTCCTC 901 Query 774 ATATAAGGTAGAGGATAACGTAGATCTCTTTCGTCAGGCAAGGAACAACCTTATCACCAT 833 |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 902 ATATAAGGCAGGGGATAACCTAGATCTCTTTCGTCAGGCAAGGAACAACCTTATCACCAT 961 Query 834 TCAAAATGACATGAATAATATGCCTGGCTTGATGAACCAGATGCCACCATTGCCGGTCAC 893 |||||||| || |||||||||||||| ||||||||| |||||||||||||||| ||||| Sbjct 962 CCAAAATGAGATAAATAATATGCCTGGATTGATGAACAAGATGCCACCATTGCCAGTCAC 1021 Query 894 AATCAATGATGATCTCTCGCTGATG---CCATTCCACACGATGCAAAGTGGCGGCTTCCA 950 ||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||| Sbjct 1022 AATCAATGATGATCTCTCGGTGATGATGCCATTCAATACGATGCAAAGTGGCGGCTTCCA 1081 Query 951 TACGAAGCAGAAGCCTT-G-AA-TCATCTGGTTTCCCTTAATTACCTGTAAATTATCCTA 1007 || |||| ||||| ||| | || ||||||||||||||||| ||||||||||||||||||| Sbjct 1082 TAGGAAGTAGAAGTCTTAGGAAATCATCTGGTTTCCCTTAGTTACCTGTAAATTATCCTA 1141 Query 1008 AAGAAGCTGGAGGAGA-AGaaaaaaaGCTCATCACATGTTGTGAAGTTTGTAGAAATGTG 1066 ||||||||||||||| | ||||||||||||||| |||||| |||||||||||||||||| Sbjct 1142 AAGAAGCTGGAGGAGGTA-AAAAAAAGCTCATCAAATGTTGGGAAGTTTGTAGAAATGTG 1200 Query 1067 ATTCTTTCATAACACCAAGGATCTTTATTGCCGGGCGCCAATGTTGAAACAGGACATAAT 1126 |||||||| ||||||||| |||||||||||| | ||| | |||||||||| |||||||| Sbjct 1201 ATTCTTTCGTAACACCAACGATCTTTATTGCTGCGCGGGA-TGTTGAAACAAGACATAAT 1259 Query 1127 a 1127 | Sbjct 1260 A 1260 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62148274710 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5