BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg476027

Length=1894
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G68980.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like s...  2723    0.0  
  AT1G69290.1 | Symbols:  | Pentatricopeptide repeat (PPR) superf...  1764    0.0  
  AT1G69280.1 | Symbols:  | unknown protein; BEST Arabidopsis tha...   706    0.0  


> AT1G68980.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like 
superfamily protein | chr1:25932998-25935030 FORWARD LENGTH=2033
Length=2033

 Score = 2723 bits (1474),  Expect = 0.0
 Identities = 1761/1899 (93%), Gaps = 22/1899 (1%)
 Strand=Plus/Plus

Query  1     GAGACGATTCCTTGTTTCTCGAATGTTGAGAAAGACTCTAACTTTAATCTCACTAAGAAG  60
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  4     GAGACGATCCCTTGTTTCTCGAATGTTGAGAAAGACTCTAACTTTAATCTCACTAAGAAG  63

Query  61    ACCCTTCTCTTCAATTTCCCGAAAACCATCGCCTAAAACCCTAACCCCACACCAAAAGTC  120
             |||||||||||||| ||  |     || |   ||||||||||||||||||||||||||||
Sbjct  64    ACCCTTCTCTTCAA-TT--C-----CC-T---CTAAAACCCTAACCCCACACCAAAAGTC  111

Query  121   CTCCTTTGAATCTACTCTCCACCATTCACTAATCACCCACGACACTGATCAAGCATGGAA  180
              ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  112   TTCCTTTGAATCAACTCTCCACCATTCCCTAATCACCCACGACACTGATCAAGCATGGAA  171

Query  181   GGTCTTCCGATCCTTCGCCGCCGCTTCTTCTCTCCCCGACAAGCGTCTCCTCAATTCTCT  240
             |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct  172   GGTCTTCCGATCCTTCGCTGCCGCTTCTTCTCTCCCGGACAAGCGTCTCCTCAATTCTCT  231

Query  241   CATCACCCACTTGTCCTCCTTCCACCACGCAGATCAAAACACCTCCCTCAGGCACAGACT  300
             ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct  232   CATCACCCACTTGTCCTCCTTCCACAACACAGATCAAAACACCTCCCTCAGGCACAGACT  291

Query  301   CAAGCGTGCCTTTGTTTCCACGACTTACGTCATCGAGAAAGATCCGATTTTGCTTGAGTT  360
             ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct  292   CAAGCGTGCCTTTGTTTCCACGACTTATGTAATCGAGAAAGATCCGATTTTGCTTGAGTT  351

Query  361   TGAGACCATCCGTACGGTTTTGGAGTCAATGAAACTAGCGAAAACTTCCGGGCCAGCGTT  420
             ||||||| ||||||||||| | ||||| ||||||||||||||| ||||||||||||| ||
Sbjct  352   TGAGACCGTCCGTACGGTTCTCGAGTCGATGAAACTAGCGAAAGCTTCCGGGCCAGCATT  411

Query  421   GGCTTTGGTGGAGTGTATGTTTAAAAACAGGTACTTTGCTCCTTTTGATCTCTGGGGGCG  480
             |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct  412   GGCTTTGGTGGAGTGTATGTTTAAAAACAGGTACTTTGTTCCTTTTGATCTCTGGGGG-G  470

Query  481   -TTTGA-TTATTGATATCTGTAGTGAAACTGGAAGCCTGGCTGCGTTTCTTAAGGTTTTT  538
              ||| | |||| ||| ||||| |||||| ||||||| ||||||||||||||||||| |||
Sbjct  471   ATTT-ACTTATCGATGTCTGTCGTGAAAATGGAAGCTTGGCTGCGTTTCTTAAGGTGTTT  529

Query  539   AGGGAAAGTTGTAGAATTGCAGTATATGAGAAGCTTGATTTTATGAAACCGGATTTGGTA  598
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  530   AGGGAAAGTTGTAGAATTGCAGTAGATGAGAAGCTTGATTTTATGAAACCGGATTTGGTA  589

Query  599   GCTAGTAATGCGGCTCTTGAAGCGTGTTGCCGGCAGTTGGAATCTCTGGCTGATGCTGAA  658
             || |||||||| |||||||||||||||||  ||||| |||||||| |||||||||||| |
Sbjct  590   GCGAGTAATGCAGCTCTTGAAGCGTGTTGTAGGCAGATGGAATCTTTGGCTGATGCTG-A  648

Query  659   G-ATGTGATTGAATCTATGGCTGTGTTGGGTGTGAAGCCTGATGAATTGAGCTTTGGGTT  717
             | || ||||||||||||||| ||| || ||||||||||||||||||||||||||||||||
Sbjct  649   GAATCTGATTGAATCTATGGATGTTTTAGGTGTGAAGCCTGATGAATTGAGCTTTGGGTT  708

Query  718   TCTTGCTTATTTGTATGCGAGAAAGGGGCTTCGAGAGAAGATAAGTGAGATTGAGAATTC  777
             ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| ||| 
Sbjct  709   TCTTGCTTATTTGTATGCGAGGAAGGGGCTTCGAGAGAAGATTAGTGAGCTTGAGGATTT  768

Query  778   AATGGATGGTTTTGGGTTTGCAAGTAGAAGAA-TCTTTTATTCTAGTGTGATCAGTGGAT  836
              ||||||||||| ||||||||||||||||||| || ||||||| ||| ||||||||||||
Sbjct  769   GATGGATGGTTTAGGGTTTGCAAGTAGAAGAATTC-TTTATTCCAGTATGATCAGTGGAT  827

Query  837   ATGTTAAGAGTGGTGATTTAGATAGTGTTTCTGATGTTATACTGCATAGTCTTAAAGGAG  896
             ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||
Sbjct  828   ATGTTAAGAGTGGTGATTTAGATAGTGCTTCTGATGTTATACTGTGTAGTCTTAAAGGAG  887

Query  897   GTGGAGAAGACTCGAGTTTCGGTGAGGAAACGTACTGTGAATTGGTGAAAGGGTTTATAG  956
              |||||||| |||||||||| ||||||||||||||||||||||||| | |||||| ||||
Sbjct  888   TTGGAGAAGCCTCGAGTTTCAGTGAGGAAACGTACTGTGAATTGGTTAGAGGGTTCATAG  947

Query  957   AGAGTAAAAGCGTTAAGTGTTTAGCCAAACTGATAATCGAAGCTCAGAAGCTT-GAATCT  1015
             |||||||||||||| || ||||||| |||||||| ||||||||||||||| || ||||||
Sbjct  948   AGAGTAAAAGCGTTGAGAGTTTAGCGAAACTGATCATCGAAGCTCAGAAG-TTGGAATCT  1006

Query  1016  CTGTCCGTTGACGTTGACGGTTCAATTGGGTTTGGAATCGTAAATGCTTGTGCCAAGCTC  1075
              |||||  ||| |||| ||| ||| | ||||||||||||||||||||||||| |||||||
Sbjct  1007  ATGTCCACTGATGTTGGCGGATCAGTGGGGTTTGGAATCGTAAATGCTTGTGTCAAGCTC  1066

Query  1076  GGTTTTTCGGGTAAAAGTATTCTCAATGAAATGAATGCTCAGGGAGGATCTGGTGGGATT  1135
             || ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct  1067  GGATTTTCGGGTAAAAGTATTCTCGATGAATTGAATGCTCAGGGAGGATCTGGAGGGATT  1126

Query  1136  GGGGTGTATGTGCCGATCTTGAAGGCCTATTGCAAAGAAGGCAGAACAGATGAAGCTACT  1195
             || ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||
Sbjct  1127  GGTGTGTATGTGCCGATCTTGAAGGCTTATTGCAAAGAAGGCAGAACATCTGAAGCTACT  1186

Query  1196  CAGCTGGTTACAGAGATCAGCAGCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACT  1255
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1187  CAGCTTGTTACAGAGATCAGCAGCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACT  1246

Query  1256  ATGATCGAAGCTTCCATGACGAAACAGGATTTCCTATCTGCGCTTACACTGTTTAGGGAT  1315
             |||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||
Sbjct  1247  ATGATCGAAGCTTCCATGACGAAACATGATTTCCTATCTGCTCTTACATTGTTTAGGGAT  1306

Query  1316  ATGCGAGAAACAAAAGTATCAGATTTGAAAAGATGCTACTTAACAATAATGACAGGTCTC  1375
             ||| ||||||||| |||  | ||| |||||||||||||||||||||||||||| ||||||
Sbjct  1307  ATGAGAGAAACAAGAGTGGCGGATCTGAAAAGATGCTACTTAACAATAATGACTGGTCTC  1366

Query  1376  CTTGAGAATCAGAGACCTGAGTTAATGGGAGAGTTTGTGGAGGAAGTTGTGGAAGATCCT  1435
             |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| 
Sbjct  1367  CTTGAGAATCAGAGACCTGAGTTAATGGCAGAGTTTGTGGAGGAAGTTATGGAAGATCCA  1426

Query  1436  CGCGTAGAAGTGAAGTCCCATGATTGGAATTCGATTATCCATGCCTTCTGCAAATCTGGG  1495
             ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| 
Sbjct  1427  CGCGTAGAAGTGAAGTCCCATGATTGGAATTCGATTATCCATGCCTTTTGTAAATCTGGT  1486

Query  1496  CGTCTAGAAGATGCAAAGAGTACATTCAGAAGGATGGCTTTCCTTCAGTACGAGCCAAAT  1555
             || |||| |||||||||||||||||||||||||||| ||||||||||||| ||||| |||
Sbjct  1487  CGCCTAGGAGATGCAAAGAGTACATTCAGAAGGATGACTTTCCTTCAGTATGAGCCGAAT  1546

Query  1556  AACCAGACATACTTGTCGTTGATCAATGGATATGTGAGCTGCGAGAAGTACTTCGAGGTG  1615
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  1547  AACCAGACATACTTGTCGTTGATCAATGGATACGTGAGCTGCGAGAAGTACTTCGAGGTG  1606

Query  1616  GTGGTTTTGTGGAAAGAGTTCAAAGACAAGAATGCAAAACTAGAGCATGCTCTTGCAGAT  1675
             |||||| | ||||||||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct  1607  GTGGTTATATGGAAAGAGTTCAAAGACAAGAAAGCAAAACTGGAGCATGCTCTTGCGGAT  1666

Query  1676  GCGTTCTTGAATGCATTAGTCAAAGGAGGGTTCTTTGGCACGGCATTGCAAGTGATAGAG  1735
             ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct  1667  GCGTTCTTGAATGCATTGGTCAAAGGAGGCTTCTTTGGCACGGCGTTGCAAGTGATAGAG  1726

Query  1736  AAATGTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTACAAGGCAACGTTCATGGAG  1795
             ||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct  1727  AAATGTCAGGAGATGAAGATATTCGTGGATAAGTGGAGGTATAAAGCAACGTTCATGGAG  1786

Query  1796  ACTCAGAAGAACCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATAAAGAAAATGGAGTTG  1855
             ||||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||| 
Sbjct  1787  ACTCAAAAGAATCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATGAAGAAAATTGAGTTT  1846

Query  1856  CTTGATGCCTTTAAGAACTGGGTTGGTCTTACCACATGA  1894
             ||||||||||||||||| |||| | || |||||||||||
Sbjct  1847  CTTGATGCCTTTAAGAATTGGGCTCGTATTACCACATGA  1885


> AT1G69290.1 | Symbols:  | Pentatricopeptide repeat (PPR) superfamily 
protein | chr1:26047372-26049348 REVERSE LENGTH=1977
Length=1977

 Score = 1764 bits (955),  Expect = 0.0
 Identities = 1570/1856 (85%), Gaps = 85/1856 (5%)
 Strand=Plus/Plus

Query  95    AAAACCCTAACCCCACACCAAAAGTCCTCCTTTGAATCTACTCTCCACCATTCAC-T-AA  152
             ||||||||||| ||| | ||||| ||||||||||||||||| |||||| |||| | | ||
Sbjct  151   AAAACCCTAACTCCAGATCAAAAATCCTCCTTTGAATCTACCCTCCACGATTC-CTTAAA  209

Query  153   TCACCCACGACACTGATCAAGCATGGAAGGTC-TTCCGATCCT-TCGCCGCCGCTTCTTC  210
             |  ||||  |||| ||| |||||||||||| | || || | || || |||||||||||||
Sbjct  210   T-GCCCATTACACCGATGAAGCATGGAAGG-CTTTTCGGT-CTCTCACCGCCGCTTCTTC  266

Query  211   TCTCCCCGACAAGCGTCTCCTCAATTCTCTCATCACCCACTTGTCCTCCT-TC-CACCAC  268
             ||| || || ||||||||| ||||||| || || ||||| ||||||   | ||  |  | 
Sbjct  267   TCTACCGGAGAAGCGTCTCATCAATTCCCTTATTACCCATTTGTCC-GGTGTCGAAGGAA  325

Query  269   GCAGATCAAAACACCTCCCTCAGGCACAGACTCAAGCGTGCCTTTGTTTCCAC-GACTTA  327
             || | | | |  |  |   ||   || ||||| || || || |||| |||  | | ||||
Sbjct  326   GC-GGTGAGAGTA--T--ATC--TCATAGACTTAAACGAGCTTTTGCTTCTGCTG-CTTA  377

Query  328   CGTCATCGAGAAAGATCCGATTTTGCTTGAGTTTGAGACCATCCGTACGGTTTTGGAGTC  387
              || || ||||||||||||||||||||||||||||||||  | |||||| ||||||||||
Sbjct  378   TGTAATTGAGAAAGATCCGATTTTGCTTGAGTTTGAGACTGTTCGTACGCTTTTGGAGTC  437

Query  388   AATGAAACTAGCGAAAACTTCCGGGCCAGCGTTGGCTTTGGTGGAGTGTATGTTTAAAAA  447
              |||||||| |||||| || | ||||| || |||||||| ||| ||||||||||||||||
Sbjct  438   GATGAAACTTGCGAAAGCTGCAGGGCCTGCTTTGGCTTTAGTGAAGTGTATGTTTAAAAA  497

Query  448   CAGGTACTTTGCTCCTTTTGATCTCTGGGGGCGTTTGATTATTGATATCTGTAGTGAAAC  507
             ||||||||||| |||||||||||||||||||| |||| |||||||||||||| |||||| 
Sbjct  498   CAGGTACTTTGTTCCTTTTGATCTCTGGGGGCATTTGGTTATTGATATCTGTCGTGAAAA  557

Query  508   TGGAAGCCTGGCTGCGTTTCTTAAGGTTTTTAGGGAAAGTTGTAGAATTGCAGTATATGA  567
             ||||||| ||||| ||||||||||||| |||| |||||||||||||||| | ||| ||||
Sbjct  558   TGGAAGCTTGGCTCCGTTTCTTAAGGTGTTTAAGGAAAGTTGTAGAATTTCTGTAGATGA  617

Query  568   GAAGCTTGATTTTATGAAACCGGATTTGGTAGCTAGTAATGCGGCTCTTGAAGCGTGTTG  627
             ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct  618   GAAGCTTGAGTTTATGAAACCCGATTTGGTAGCTAGTAATGCGGCTCTTGAAGCGTGTTG  677

Query  628   CCGGCAGTTGGAATCTCTGGCTGATGCTGAAGATGTGATTGAATCTATGGCTGTGTTGGG  687
              || ||| |||||||| |||||||||||||| |||||||||||||||||||||| || ||
Sbjct  678   TCGACAGATGGAATCTTTGGCTGATGCTGAAAATGTGATTGAATCTATGGCTGTTTTAGG  737

Query  688   TGTGAAGCCTGATGAATTGAGCTTTGGGTTTCTTGCTTATTTGTATGCGAGAAAGGGGCT  747
             ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  738   TGTGAAGCCTGATGAATTGAGCTTTGGGTTTCTTGCTTATTTGTATGCGAGGAAGGGGCT  797

Query  748   TCGAGAGAAGATAAGTGAGATTGAGAATTCAATGGATGGTTTTGGGTTTGCAAGTAGAAG  807
             |||||||||||| |||||| |||||||||  |||||||||||||| ||||||||||||||
Sbjct  798   TCGAGAGAAGATTAGTGAGCTTGAGAATTTGATGGATGGTTTTGGTTTTGCAAGTAGAAG  857

Query  808   AATCTTTTATTCTAGTGTGATCAGTGGATATGTTAAGAGTGGTGATTTAGATAGTGTTTC  867
             |||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct  858   AATCCTTTATTCTAATATGATCAGTGGATATGTTAAGAGTGGTGATTTAGATAGTGTTTC  917

Query  868   TGATGTTATACTGCATAGTCTTAAAGGAGGTGGAGAAGACTCGAGTTTCGGTGAGGAAAC  927
             |||||||||| ||||||||||||||| ||||||||| || ||||||||| ||| ||||||
Sbjct  918   TGATGTTATATTGCATAGTCTTAAAGAAGGTGGAGAGGAATCGAGTTTCAGTGTGGAAAC  977

Query  928   GTACTGTGAATTGGTGAAAGGGTTTATAGAGAGTAAAAGCGTTAAGTGTTTAGCCAAACT  987
             ||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| |
Sbjct  978   GTATTGTGAATTGGTTAAAGGGTTTATAGAGAGTAAAAGCGTTAAGAGTTTAGCGAAAGT  1037

Query  988   GATAATCGAAGCTCAGAAGCTT-GAATC-TCTGTCCGTTGACGTTGACGGTTCAATTGGG  1045
             |||| |||||||||||||| || ||||| ||| | |||||  |||||| ||||| |||||
Sbjct  1038  GATACTCGAAGCTCAGAAG-TTGGAATCTTCT-TACGTTGGTGTTGACAGTTCAGTTGGG  1095

Query  1046  TTTGGAATCGTAAATGCTTGTGCCAAGCTCGGTTTTTCGGGT--A--A-A-AGTATTCTC  1099
             ||||||||| ||||||||||||  || || ||||| |||| |  |  | | |||||||||
Sbjct  1096  TTTGGAATCATAAATGCTTGTGTAAATCTTGGTTTCTCGGATAAAGCACATAGTATTCTC  1155

Query  1100  AATGAAATGAATGCTCA--G-GGAGGATCTGGT-GGGATTGGGGTGTATGTGCCGATCTT  1155
              | ||||||| ||||||  | ||||||||| || ||||||||||| |||||||| |||||
Sbjct  1156  GAGGAAATGATTGCTCAGGGAGGAGGATCT-GTAGGGATTGGGGTTTATGTGCCAATCTT  1214

Query  1156  GAAGGCCTATTGCAAAGAAG-GCAGAACAGATGAAGCTACTCAGCTGGTTACAGAGATCA  1214
              || || |||||||||| ||  |||||||| |||||||||||||||||||||||||||||
Sbjct  1215  AAAAGCTTATTGCAAAG-AGTACAGAACAGCTGAAGCTACTCAGCTGGTTACAGAGATCA  1273

Query  1215  GCAGCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACTATGATCGAAGCTTCCATGA  1274
             ||||||||||||||||||||||||| |||| || |||| || ||||||||||||||||||
Sbjct  1274  GCAGCTCTGGGCTTCAATTAGACGTCGAGATCTCTAACGCTTTGATCGAAGCTTCCATGA  1333

Query  1275  CGAAACAGGATTTCCTATCTGCGCTTACACTGTTTAGGGATATGCGAGAAACAAA-AGTA  1333
             |||| ||||||||  |||||||| ||||| |||||||||||||| |||||| | | ||| 
Sbjct  1334  CGAATCAGGATTTTATATCTGCGTTTACATTGTTTAGGGATATGAGAGAAA-ATAGAGTG  1392

Query  1334  -TCAGATTTGAAAAG-ATGCTACTTAACAATAATGACAGGTCTCCTTGAGAATCAGAGAC  1391
              |  ||||||||  | | | ||||||||||||||||||||||| |||||||| |||||||
Sbjct  1393  GTG-GATTTGAAGGGGA-GTTACTTAACAATAATGACAGGTCTTCTTGAGAACCAGAGAC  1450

Query  1392  CTGAGTTAATGGGAGAGTTTGTGGAGGAAGTTGTGGAAGATCCTCGCGTAGAAGTGAAGT  1451
             |||||||||||| || |||| | || |||||||| ||||| ||||| || |||||||| |
Sbjct  1451  CTGAGTTAATGGCAGCGTTTCTAGACGAAGTTGTTGAAGACCCTCGTGTTGAAGTGAATT  1510

Query  1452  CCCATGATTGGAATTCGATTATCCATGCCTTCTGCAAATCTGGGCGTCTAGAAGATGCAA  1511
             |||||||||||||||||||||| |||||||| || ||||| |||||||| ||||||||| 
Sbjct  1511  CCCATGATTGGAATTCGATTATTCATGCCTTTTGTAAATCCGGGCGTCTGGAAGATGCAC  1570

Query  1512  AGAGTACATTCAGAAGGATGGCTTTCCTTCAGT-ACGAGCCAAATAACCAGACATACTTG  1570
              ||| |||||||||||||||| |||||| | || | |||||||| |||||||||||||| 
Sbjct  1571  GGAGGACATTCAGAAGGATGGTTTTCCTAC-GTTATGAGCCAAACAACCAGACATACTTA  1629

Query  1571  TCGTTGATCAATGGATATGTGAGCTGCGAGAAGTACTTCGAGGTGGTGGTTTTGTGGAAA  1630
             || ||||| ||||||||||||||| | || ||||||||  | ||  || | |||||||| 
Sbjct  1630  TCTTTGATTAATGGATATGTGAGCGGGGAAAAGTACTTTAACGTCCTGCTCTTGTGGAAC  1689

Query  1631  GAG-TTCAAAGACAAGA-AT-G-C-----A---A-A-AC----T--AGA---G--CATGC  1665
             ||| || ||||  |||| || | |     |   | | |     |  |||   |  |||||
Sbjct  1690  GAGATT-AAAGGTAAGATATCGTCGGTGGAGGCAGAGAAGAGGTCCAGACTAGATCATGC  1748

Query  1666  TCTTG-CAGATGCGTTCTTGAATGCATTAGTCAAAGGAGGGTTCTTTG--GCA-CGGCAT  1721
             ||| | | ||||| |||||| | ||||| || |||||||| |||||||  ||| ||  ||
Sbjct  1749  TCTAGTC-GATGCATTCTTGTACGCATTGGTGAAAGGAGGATTCTTTGATGCAGCG--AT  1805

Query  1722  TGCAAGTGATAGAGAAATGTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTACAAGG  1781
              ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||| 
Sbjct  1806  -GCAAGTGGTAGAGAAATCTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTATAAG-  1863

Query  1782  CAA-CGTTCATGGAGACTCAGAAGAACCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATA  1840
             ||| |||||||||||||||| ||||| ||||||||||||||| |||||||||||||  ||
Sbjct  1864  CAAGCGTTCATGGAGACTCACAAGAAACTCAGATTGCCAAAGCTGAGGAAGAGGAAC-TA  1922

Query  1841  -AAGAAAATGGAGT-TGCTTGATGCCTTTAAGAACTGGGTTGGTCTTACCACATGA  1894
              ||||||||||| | | |||| |||||| |||||||||| |||||| | |||||||
Sbjct  1923  CAAGAAAATGGAATCT-CTTGTTGCCTTCAAGAACTGGGCTGGTCTCAACACATGA  1977


> AT1G69280.1 | Symbols:  | unknown protein; BEST Arabidopsis thaliana 
protein match is: unknown protein (TAIR:AT2G03630.1); 
Has 885 Blast hits to 474 proteins in 40 species: Archae - 
0; Bacteria - 4; Metazoa - 731; Fungi - 9; Plants - 68; Viruses 
- 0; Other Eukaryotes - 73 (source: NCBI BLink). | chr1:26045160-26048190 
REVERSE LENGTH=2743
Length=2743

 Score =  706 bits (382),  Expect = 0.0
 Identities = 692/833 (83%), Gaps = 55/833 (7%)
 Strand=Plus/Plus

Query  1103  GAAATGAATGCTCA--G-GGAGGATCTGGT-GGGATTGGGGTGTATGTGCCGATCTTGAA  1158
             ||||||| ||||||  | ||||||||| || ||||||||||| |||||||| ||||| ||
Sbjct  1     GAAATGATTGCTCAGGGAGGAGGATCT-GTAGGGATTGGGGTTTATGTGCCAATCTTAAA  59

Query  1159  GGCCTATTGCAAAGAAG-GCAGAACAGATGAAGCTACTCAGCTGGTTACAGAGATCAGCA  1217
              || |||||||||| ||  |||||||| ||||||||||||||||||||||||||||||||
Sbjct  60    AGCTTATTGCAAAG-AGTACAGAACAGCTGAAGCTACTCAGCTGGTTACAGAGATCAGCA  118

Query  1218  GCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACTATGATCGAAGCTTCCATGACGA  1277
             |||||||||||||||||||||| |||| || |||| || |||||||||||||||||||||
Sbjct  119   GCTCTGGGCTTCAATTAGACGTCGAGATCTCTAACGCTTTGATCGAAGCTTCCATGACGA  178

Query  1278  AACAGGATTTCCTATCTGCGCTTACACTGTTTAGGGATATGCGAGAAACAAA-AGTA-TC  1335
             | ||||||||  |||||||| ||||| |||||||||||||| |||||| | | |||  | 
Sbjct  179   ATCAGGATTTTATATCTGCGTTTACATTGTTTAGGGATATGAGAGAAA-ATAGAGTGGTG  237

Query  1336  AGATTTGAAAAG-ATGCTACTTAACAATAATGACAGGTCTCCTTGAGAATCAGAGACCTG  1394
              ||||||||  | | | ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct  238   -GATTTGAAGGGGA-GTTACTTAACAATAATGACAGGTCTTCTTGAGAACCAGAGACCTG  295

Query  1395  AGTTAATGGGAGAGTTTGTGGAGGAAGTTGTGGAAGATCCTCGCGTAGAAGTGAAGTCCC  1454
             ||||||||| || |||| | || |||||||| ||||| ||||| || |||||||| ||||
Sbjct  296   AGTTAATGGCAGCGTTTCTAGACGAAGTTGTTGAAGACCCTCGTGTTGAAGTGAATTCCC  355

Query  1455  ATGATTGGAATTCGATTATCCATGCCTTCTGCAAATCTGGGCGTCTAGAAGATGCAAAGA  1514
             ||||||||||||||||||| |||||||| || ||||| |||||||| |||||||||  ||
Sbjct  356   ATGATTGGAATTCGATTATTCATGCCTTTTGTAAATCCGGGCGTCTGGAAGATGCACGGA  415

Query  1515  GTACATTCAGAAGGATGGCTTTCCTTCAGT-ACGAGCCAAATAACCAGACATACTTGTCG  1573
             | |||||||||||||||| |||||| | || | |||||||| |||||||||||||| || 
Sbjct  416   GGACATTCAGAAGGATGGTTTTCCTAC-GTTATGAGCCAAACAACCAGACATACTTATCT  474

Query  1574  TTGATCAATGGATATGTGAGCTGCGAGAAGTACTTCGAGGTGGTGGTTTTGTGGAAAGAG  1633
             ||||| ||||||||||||||| | || ||||||||  | ||  || | |||||||| |||
Sbjct  475   TTGATTAATGGATATGTGAGCGGGGAAAAGTACTTTAACGTCCTGCTCTTGTGGAACGAG  534

Query  1634  -TTCAAAGACAAGA-AT-G-C-----A---A-A-AC----T--AGA---G--CATGCTCT  1668
              || ||||  |||| || | |     |   | | |     |  |||   |  ||||||||
Sbjct  535   ATT-AAAGGTAAGATATCGTCGGTGGAGGCAGAGAAGAGGTCCAGACTAGATCATGCTCT  593

Query  1669  TG-CAGATGCGTTCTTGAATGCATTAGTCAAAGGAGGGTTCTTTG--GCA-CGGCATTGC  1724
              | | ||||| |||||| | ||||| || |||||||| |||||||  ||| ||  || ||
Sbjct  594   AGTC-GATGCATTCTTGTACGCATTGGTGAAAGGAGGATTCTTTGATGCAGCG--AT-GC  649

Query  1725  AAGTGATAGAGAAATGTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTACAAGGCAA  1784
             ||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||| |||
Sbjct  650   AAGTGGTAGAGAAATCTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTATAAG-CAA  708

Query  1785  -CGTTCATGGAGACTCAGAAGAACCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATA-AA  1842
              |||||||||||||||| ||||| ||||||||||||||| |||||||||||||  || ||
Sbjct  709   GCGTTCATGGAGACTCACAAGAAACTCAGATTGCCAAAGCTGAGGAAGAGGAAC-TACAA  767

Query  1843  GAAAATGGAGT-TGCTTGATGCCTTTAAGAACTGGGTTGGTCTTACCACATGA  1894
             ||||||||| | | |||| |||||| |||||||||| |||||| | |||||||
Sbjct  768   GAAAATGGAATCT-CTTGTTGCCTTCAAGAACTGGGCTGGTCTCAACACATGA  819



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 93774618060


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5