BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476027 Length=1894 Score E Sequences producing significant alignments: (Bits) Value AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 2723 0.0 AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superf... 1764 0.0 AT1G69280.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 706 0.0 > AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:25932998-25935030 FORWARD LENGTH=2033 Length=2033 Score = 2723 bits (1474), Expect = 0.0 Identities = 1761/1899 (93%), Gaps = 22/1899 (1%) Strand=Plus/Plus Query 1 GAGACGATTCCTTGTTTCTCGAATGTTGAGAAAGACTCTAACTTTAATCTCACTAAGAAG 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4 GAGACGATCCCTTGTTTCTCGAATGTTGAGAAAGACTCTAACTTTAATCTCACTAAGAAG 63 Query 61 ACCCTTCTCTTCAATTTCCCGAAAACCATCGCCTAAAACCCTAACCCCACACCAAAAGTC 120 |||||||||||||| || | || | |||||||||||||||||||||||||||| Sbjct 64 ACCCTTCTCTTCAA-TT--C-----CC-T---CTAAAACCCTAACCCCACACCAAAAGTC 111 Query 121 CTCCTTTGAATCTACTCTCCACCATTCACTAATCACCCACGACACTGATCAAGCATGGAA 180 ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 112 TTCCTTTGAATCAACTCTCCACCATTCCCTAATCACCCACGACACTGATCAAGCATGGAA 171 Query 181 GGTCTTCCGATCCTTCGCCGCCGCTTCTTCTCTCCCCGACAAGCGTCTCCTCAATTCTCT 240 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 172 GGTCTTCCGATCCTTCGCTGCCGCTTCTTCTCTCCCGGACAAGCGTCTCCTCAATTCTCT 231 Query 241 CATCACCCACTTGTCCTCCTTCCACCACGCAGATCAAAACACCTCCCTCAGGCACAGACT 300 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 232 CATCACCCACTTGTCCTCCTTCCACAACACAGATCAAAACACCTCCCTCAGGCACAGACT 291 Query 301 CAAGCGTGCCTTTGTTTCCACGACTTACGTCATCGAGAAAGATCCGATTTTGCTTGAGTT 360 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 292 CAAGCGTGCCTTTGTTTCCACGACTTATGTAATCGAGAAAGATCCGATTTTGCTTGAGTT 351 Query 361 TGAGACCATCCGTACGGTTTTGGAGTCAATGAAACTAGCGAAAACTTCCGGGCCAGCGTT 420 ||||||| ||||||||||| | ||||| ||||||||||||||| ||||||||||||| || Sbjct 352 TGAGACCGTCCGTACGGTTCTCGAGTCGATGAAACTAGCGAAAGCTTCCGGGCCAGCATT 411 Query 421 GGCTTTGGTGGAGTGTATGTTTAAAAACAGGTACTTTGCTCCTTTTGATCTCTGGGGGCG 480 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct 412 GGCTTTGGTGGAGTGTATGTTTAAAAACAGGTACTTTGTTCCTTTTGATCTCTGGGGG-G 470 Query 481 -TTTGA-TTATTGATATCTGTAGTGAAACTGGAAGCCTGGCTGCGTTTCTTAAGGTTTTT 538 ||| | |||| ||| ||||| |||||| ||||||| ||||||||||||||||||| ||| Sbjct 471 ATTT-ACTTATCGATGTCTGTCGTGAAAATGGAAGCTTGGCTGCGTTTCTTAAGGTGTTT 529 Query 539 AGGGAAAGTTGTAGAATTGCAGTATATGAGAAGCTTGATTTTATGAAACCGGATTTGGTA 598 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 530 AGGGAAAGTTGTAGAATTGCAGTAGATGAGAAGCTTGATTTTATGAAACCGGATTTGGTA 589 Query 599 GCTAGTAATGCGGCTCTTGAAGCGTGTTGCCGGCAGTTGGAATCTCTGGCTGATGCTGAA 658 || |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||| | Sbjct 590 GCGAGTAATGCAGCTCTTGAAGCGTGTTGTAGGCAGATGGAATCTTTGGCTGATGCTG-A 648 Query 659 G-ATGTGATTGAATCTATGGCTGTGTTGGGTGTGAAGCCTGATGAATTGAGCTTTGGGTT 717 | || ||||||||||||||| ||| || |||||||||||||||||||||||||||||||| Sbjct 649 GAATCTGATTGAATCTATGGATGTTTTAGGTGTGAAGCCTGATGAATTGAGCTTTGGGTT 708 Query 718 TCTTGCTTATTTGTATGCGAGAAAGGGGCTTCGAGAGAAGATAAGTGAGATTGAGAATTC 777 ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| ||| Sbjct 709 TCTTGCTTATTTGTATGCGAGGAAGGGGCTTCGAGAGAAGATTAGTGAGCTTGAGGATTT 768 Query 778 AATGGATGGTTTTGGGTTTGCAAGTAGAAGAA-TCTTTTATTCTAGTGTGATCAGTGGAT 836 ||||||||||| ||||||||||||||||||| || ||||||| ||| |||||||||||| Sbjct 769 GATGGATGGTTTAGGGTTTGCAAGTAGAAGAATTC-TTTATTCCAGTATGATCAGTGGAT 827 Query 837 ATGTTAAGAGTGGTGATTTAGATAGTGTTTCTGATGTTATACTGCATAGTCTTAAAGGAG 896 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 828 ATGTTAAGAGTGGTGATTTAGATAGTGCTTCTGATGTTATACTGTGTAGTCTTAAAGGAG 887 Query 897 GTGGAGAAGACTCGAGTTTCGGTGAGGAAACGTACTGTGAATTGGTGAAAGGGTTTATAG 956 |||||||| |||||||||| ||||||||||||||||||||||||| | |||||| |||| Sbjct 888 TTGGAGAAGCCTCGAGTTTCAGTGAGGAAACGTACTGTGAATTGGTTAGAGGGTTCATAG 947 Query 957 AGAGTAAAAGCGTTAAGTGTTTAGCCAAACTGATAATCGAAGCTCAGAAGCTT-GAATCT 1015 |||||||||||||| || ||||||| |||||||| ||||||||||||||| || |||||| Sbjct 948 AGAGTAAAAGCGTTGAGAGTTTAGCGAAACTGATCATCGAAGCTCAGAAG-TTGGAATCT 1006 Query 1016 CTGTCCGTTGACGTTGACGGTTCAATTGGGTTTGGAATCGTAAATGCTTGTGCCAAGCTC 1075 ||||| ||| |||| ||| ||| | ||||||||||||||||||||||||| ||||||| Sbjct 1007 ATGTCCACTGATGTTGGCGGATCAGTGGGGTTTGGAATCGTAAATGCTTGTGTCAAGCTC 1066 Query 1076 GGTTTTTCGGGTAAAAGTATTCTCAATGAAATGAATGCTCAGGGAGGATCTGGTGGGATT 1135 || ||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||| Sbjct 1067 GGATTTTCGGGTAAAAGTATTCTCGATGAATTGAATGCTCAGGGAGGATCTGGAGGGATT 1126 Query 1136 GGGGTGTATGTGCCGATCTTGAAGGCCTATTGCAAAGAAGGCAGAACAGATGAAGCTACT 1195 || ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 1127 GGTGTGTATGTGCCGATCTTGAAGGCTTATTGCAAAGAAGGCAGAACATCTGAAGCTACT 1186 Query 1196 CAGCTGGTTACAGAGATCAGCAGCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACT 1255 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1187 CAGCTTGTTACAGAGATCAGCAGCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACT 1246 Query 1256 ATGATCGAAGCTTCCATGACGAAACAGGATTTCCTATCTGCGCTTACACTGTTTAGGGAT 1315 |||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| Sbjct 1247 ATGATCGAAGCTTCCATGACGAAACATGATTTCCTATCTGCTCTTACATTGTTTAGGGAT 1306 Query 1316 ATGCGAGAAACAAAAGTATCAGATTTGAAAAGATGCTACTTAACAATAATGACAGGTCTC 1375 ||| ||||||||| ||| | ||| |||||||||||||||||||||||||||| |||||| Sbjct 1307 ATGAGAGAAACAAGAGTGGCGGATCTGAAAAGATGCTACTTAACAATAATGACTGGTCTC 1366 Query 1376 CTTGAGAATCAGAGACCTGAGTTAATGGGAGAGTTTGTGGAGGAAGTTGTGGAAGATCCT 1435 |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct 1367 CTTGAGAATCAGAGACCTGAGTTAATGGCAGAGTTTGTGGAGGAAGTTATGGAAGATCCA 1426 Query 1436 CGCGTAGAAGTGAAGTCCCATGATTGGAATTCGATTATCCATGCCTTCTGCAAATCTGGG 1495 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1427 CGCGTAGAAGTGAAGTCCCATGATTGGAATTCGATTATCCATGCCTTTTGTAAATCTGGT 1486 Query 1496 CGTCTAGAAGATGCAAAGAGTACATTCAGAAGGATGGCTTTCCTTCAGTACGAGCCAAAT 1555 || |||| |||||||||||||||||||||||||||| ||||||||||||| ||||| ||| Sbjct 1487 CGCCTAGGAGATGCAAAGAGTACATTCAGAAGGATGACTTTCCTTCAGTATGAGCCGAAT 1546 Query 1556 AACCAGACATACTTGTCGTTGATCAATGGATATGTGAGCTGCGAGAAGTACTTCGAGGTG 1615 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1547 AACCAGACATACTTGTCGTTGATCAATGGATACGTGAGCTGCGAGAAGTACTTCGAGGTG 1606 Query 1616 GTGGTTTTGTGGAAAGAGTTCAAAGACAAGAATGCAAAACTAGAGCATGCTCTTGCAGAT 1675 |||||| | ||||||||||||||||||||||| |||||||| |||||||||||||| ||| Sbjct 1607 GTGGTTATATGGAAAGAGTTCAAAGACAAGAAAGCAAAACTGGAGCATGCTCTTGCGGAT 1666 Query 1676 GCGTTCTTGAATGCATTAGTCAAAGGAGGGTTCTTTGGCACGGCATTGCAAGTGATAGAG 1735 ||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||| Sbjct 1667 GCGTTCTTGAATGCATTGGTCAAAGGAGGCTTCTTTGGCACGGCGTTGCAAGTGATAGAG 1726 Query 1736 AAATGTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTACAAGGCAACGTTCATGGAG 1795 ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct 1727 AAATGTCAGGAGATGAAGATATTCGTGGATAAGTGGAGGTATAAAGCAACGTTCATGGAG 1786 Query 1796 ACTCAGAAGAACCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATAAAGAAAATGGAGTTG 1855 ||||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 1787 ACTCAAAAGAATCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATGAAGAAAATTGAGTTT 1846 Query 1856 CTTGATGCCTTTAAGAACTGGGTTGGTCTTACCACATGA 1894 ||||||||||||||||| |||| | || ||||||||||| Sbjct 1847 CTTGATGCCTTTAAGAATTGGGCTCGTATTACCACATGA 1885 > AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:26047372-26049348 REVERSE LENGTH=1977 Length=1977 Score = 1764 bits (955), Expect = 0.0 Identities = 1570/1856 (85%), Gaps = 85/1856 (5%) Strand=Plus/Plus Query 95 AAAACCCTAACCCCACACCAAAAGTCCTCCTTTGAATCTACTCTCCACCATTCAC-T-AA 152 ||||||||||| ||| | ||||| ||||||||||||||||| |||||| |||| | | || Sbjct 151 AAAACCCTAACTCCAGATCAAAAATCCTCCTTTGAATCTACCCTCCACGATTC-CTTAAA 209 Query 153 TCACCCACGACACTGATCAAGCATGGAAGGTC-TTCCGATCCT-TCGCCGCCGCTTCTTC 210 | |||| |||| ||| |||||||||||| | || || | || || ||||||||||||| Sbjct 210 T-GCCCATTACACCGATGAAGCATGGAAGG-CTTTTCGGT-CTCTCACCGCCGCTTCTTC 266 Query 211 TCTCCCCGACAAGCGTCTCCTCAATTCTCTCATCACCCACTTGTCCTCCT-TC-CACCAC 268 ||| || || ||||||||| ||||||| || || ||||| |||||| | || | | Sbjct 267 TCTACCGGAGAAGCGTCTCATCAATTCCCTTATTACCCATTTGTCC-GGTGTCGAAGGAA 325 Query 269 GCAGATCAAAACACCTCCCTCAGGCACAGACTCAAGCGTGCCTTTGTTTCCAC-GACTTA 327 || | | | | | | || || ||||| || || || |||| ||| | | |||| Sbjct 326 GC-GGTGAGAGTA--T--ATC--TCATAGACTTAAACGAGCTTTTGCTTCTGCTG-CTTA 377 Query 328 CGTCATCGAGAAAGATCCGATTTTGCTTGAGTTTGAGACCATCCGTACGGTTTTGGAGTC 387 || || |||||||||||||||||||||||||||||||| | |||||| |||||||||| Sbjct 378 TGTAATTGAGAAAGATCCGATTTTGCTTGAGTTTGAGACTGTTCGTACGCTTTTGGAGTC 437 Query 388 AATGAAACTAGCGAAAACTTCCGGGCCAGCGTTGGCTTTGGTGGAGTGTATGTTTAAAAA 447 |||||||| |||||| || | ||||| || |||||||| ||| |||||||||||||||| Sbjct 438 GATGAAACTTGCGAAAGCTGCAGGGCCTGCTTTGGCTTTAGTGAAGTGTATGTTTAAAAA 497 Query 448 CAGGTACTTTGCTCCTTTTGATCTCTGGGGGCGTTTGATTATTGATATCTGTAGTGAAAC 507 ||||||||||| |||||||||||||||||||| |||| |||||||||||||| |||||| Sbjct 498 CAGGTACTTTGTTCCTTTTGATCTCTGGGGGCATTTGGTTATTGATATCTGTCGTGAAAA 557 Query 508 TGGAAGCCTGGCTGCGTTTCTTAAGGTTTTTAGGGAAAGTTGTAGAATTGCAGTATATGA 567 ||||||| ||||| ||||||||||||| |||| |||||||||||||||| | ||| |||| Sbjct 558 TGGAAGCTTGGCTCCGTTTCTTAAGGTGTTTAAGGAAAGTTGTAGAATTTCTGTAGATGA 617 Query 568 GAAGCTTGATTTTATGAAACCGGATTTGGTAGCTAGTAATGCGGCTCTTGAAGCGTGTTG 627 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 618 GAAGCTTGAGTTTATGAAACCCGATTTGGTAGCTAGTAATGCGGCTCTTGAAGCGTGTTG 677 Query 628 CCGGCAGTTGGAATCTCTGGCTGATGCTGAAGATGTGATTGAATCTATGGCTGTGTTGGG 687 || ||| |||||||| |||||||||||||| |||||||||||||||||||||| || || Sbjct 678 TCGACAGATGGAATCTTTGGCTGATGCTGAAAATGTGATTGAATCTATGGCTGTTTTAGG 737 Query 688 TGTGAAGCCTGATGAATTGAGCTTTGGGTTTCTTGCTTATTTGTATGCGAGAAAGGGGCT 747 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 738 TGTGAAGCCTGATGAATTGAGCTTTGGGTTTCTTGCTTATTTGTATGCGAGGAAGGGGCT 797 Query 748 TCGAGAGAAGATAAGTGAGATTGAGAATTCAATGGATGGTTTTGGGTTTGCAAGTAGAAG 807 |||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||||| Sbjct 798 TCGAGAGAAGATTAGTGAGCTTGAGAATTTGATGGATGGTTTTGGTTTTGCAAGTAGAAG 857 Query 808 AATCTTTTATTCTAGTGTGATCAGTGGATATGTTAAGAGTGGTGATTTAGATAGTGTTTC 867 |||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 858 AATCCTTTATTCTAATATGATCAGTGGATATGTTAAGAGTGGTGATTTAGATAGTGTTTC 917 Query 868 TGATGTTATACTGCATAGTCTTAAAGGAGGTGGAGAAGACTCGAGTTTCGGTGAGGAAAC 927 |||||||||| ||||||||||||||| ||||||||| || ||||||||| ||| |||||| Sbjct 918 TGATGTTATATTGCATAGTCTTAAAGAAGGTGGAGAGGAATCGAGTTTCAGTGTGGAAAC 977 Query 928 GTACTGTGAATTGGTGAAAGGGTTTATAGAGAGTAAAAGCGTTAAGTGTTTAGCCAAACT 987 ||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| | Sbjct 978 GTATTGTGAATTGGTTAAAGGGTTTATAGAGAGTAAAAGCGTTAAGAGTTTAGCGAAAGT 1037 Query 988 GATAATCGAAGCTCAGAAGCTT-GAATC-TCTGTCCGTTGACGTTGACGGTTCAATTGGG 1045 |||| |||||||||||||| || ||||| ||| | ||||| |||||| ||||| ||||| Sbjct 1038 GATACTCGAAGCTCAGAAG-TTGGAATCTTCT-TACGTTGGTGTTGACAGTTCAGTTGGG 1095 Query 1046 TTTGGAATCGTAAATGCTTGTGCCAAGCTCGGTTTTTCGGGT--A--A-A-AGTATTCTC 1099 ||||||||| |||||||||||| || || ||||| |||| | | | | ||||||||| Sbjct 1096 TTTGGAATCATAAATGCTTGTGTAAATCTTGGTTTCTCGGATAAAGCACATAGTATTCTC 1155 Query 1100 AATGAAATGAATGCTCA--G-GGAGGATCTGGT-GGGATTGGGGTGTATGTGCCGATCTT 1155 | ||||||| |||||| | ||||||||| || ||||||||||| |||||||| ||||| Sbjct 1156 GAGGAAATGATTGCTCAGGGAGGAGGATCT-GTAGGGATTGGGGTTTATGTGCCAATCTT 1214 Query 1156 GAAGGCCTATTGCAAAGAAG-GCAGAACAGATGAAGCTACTCAGCTGGTTACAGAGATCA 1214 || || |||||||||| || |||||||| ||||||||||||||||||||||||||||| Sbjct 1215 AAAAGCTTATTGCAAAG-AGTACAGAACAGCTGAAGCTACTCAGCTGGTTACAGAGATCA 1273 Query 1215 GCAGCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACTATGATCGAAGCTTCCATGA 1274 ||||||||||||||||||||||||| |||| || |||| || |||||||||||||||||| Sbjct 1274 GCAGCTCTGGGCTTCAATTAGACGTCGAGATCTCTAACGCTTTGATCGAAGCTTCCATGA 1333 Query 1275 CGAAACAGGATTTCCTATCTGCGCTTACACTGTTTAGGGATATGCGAGAAACAAA-AGTA 1333 |||| |||||||| |||||||| ||||| |||||||||||||| |||||| | | ||| Sbjct 1334 CGAATCAGGATTTTATATCTGCGTTTACATTGTTTAGGGATATGAGAGAAA-ATAGAGTG 1392 Query 1334 -TCAGATTTGAAAAG-ATGCTACTTAACAATAATGACAGGTCTCCTTGAGAATCAGAGAC 1391 | |||||||| | | | ||||||||||||||||||||||| |||||||| ||||||| Sbjct 1393 GTG-GATTTGAAGGGGA-GTTACTTAACAATAATGACAGGTCTTCTTGAGAACCAGAGAC 1450 Query 1392 CTGAGTTAATGGGAGAGTTTGTGGAGGAAGTTGTGGAAGATCCTCGCGTAGAAGTGAAGT 1451 |||||||||||| || |||| | || |||||||| ||||| ||||| || |||||||| | Sbjct 1451 CTGAGTTAATGGCAGCGTTTCTAGACGAAGTTGTTGAAGACCCTCGTGTTGAAGTGAATT 1510 Query 1452 CCCATGATTGGAATTCGATTATCCATGCCTTCTGCAAATCTGGGCGTCTAGAAGATGCAA 1511 |||||||||||||||||||||| |||||||| || ||||| |||||||| ||||||||| Sbjct 1511 CCCATGATTGGAATTCGATTATTCATGCCTTTTGTAAATCCGGGCGTCTGGAAGATGCAC 1570 Query 1512 AGAGTACATTCAGAAGGATGGCTTTCCTTCAGT-ACGAGCCAAATAACCAGACATACTTG 1570 ||| |||||||||||||||| |||||| | || | |||||||| |||||||||||||| Sbjct 1571 GGAGGACATTCAGAAGGATGGTTTTCCTAC-GTTATGAGCCAAACAACCAGACATACTTA 1629 Query 1571 TCGTTGATCAATGGATATGTGAGCTGCGAGAAGTACTTCGAGGTGGTGGTTTTGTGGAAA 1630 || ||||| ||||||||||||||| | || |||||||| | || || | |||||||| Sbjct 1630 TCTTTGATTAATGGATATGTGAGCGGGGAAAAGTACTTTAACGTCCTGCTCTTGTGGAAC 1689 Query 1631 GAG-TTCAAAGACAAGA-AT-G-C-----A---A-A-AC----T--AGA---G--CATGC 1665 ||| || |||| |||| || | | | | | | | ||| | ||||| Sbjct 1690 GAGATT-AAAGGTAAGATATCGTCGGTGGAGGCAGAGAAGAGGTCCAGACTAGATCATGC 1748 Query 1666 TCTTG-CAGATGCGTTCTTGAATGCATTAGTCAAAGGAGGGTTCTTTG--GCA-CGGCAT 1721 ||| | | ||||| |||||| | ||||| || |||||||| ||||||| ||| || || Sbjct 1749 TCTAGTC-GATGCATTCTTGTACGCATTGGTGAAAGGAGGATTCTTTGATGCAGCG--AT 1805 Query 1722 TGCAAGTGATAGAGAAATGTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTACAAGG 1781 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 1806 -GCAAGTGGTAGAGAAATCTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTATAAG- 1863 Query 1782 CAA-CGTTCATGGAGACTCAGAAGAACCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATA 1840 ||| |||||||||||||||| ||||| ||||||||||||||| ||||||||||||| || Sbjct 1864 CAAGCGTTCATGGAGACTCACAAGAAACTCAGATTGCCAAAGCTGAGGAAGAGGAAC-TA 1922 Query 1841 -AAGAAAATGGAGT-TGCTTGATGCCTTTAAGAACTGGGTTGGTCTTACCACATGA 1894 ||||||||||| | | |||| |||||| |||||||||| |||||| | ||||||| Sbjct 1923 CAAGAAAATGGAATCT-CTTGTTGCCTTCAAGAACTGGGCTGGTCTCAACACATGA 1977 > AT1G69280.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03630.1); Has 885 Blast hits to 474 proteins in 40 species: Archae - 0; Bacteria - 4; Metazoa - 731; Fungi - 9; Plants - 68; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). | chr1:26045160-26048190 REVERSE LENGTH=2743 Length=2743 Score = 706 bits (382), Expect = 0.0 Identities = 692/833 (83%), Gaps = 55/833 (7%) Strand=Plus/Plus Query 1103 GAAATGAATGCTCA--G-GGAGGATCTGGT-GGGATTGGGGTGTATGTGCCGATCTTGAA 1158 ||||||| |||||| | ||||||||| || ||||||||||| |||||||| ||||| || Sbjct 1 GAAATGATTGCTCAGGGAGGAGGATCT-GTAGGGATTGGGGTTTATGTGCCAATCTTAAA 59 Query 1159 GGCCTATTGCAAAGAAG-GCAGAACAGATGAAGCTACTCAGCTGGTTACAGAGATCAGCA 1217 || |||||||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct 60 AGCTTATTGCAAAG-AGTACAGAACAGCTGAAGCTACTCAGCTGGTTACAGAGATCAGCA 118 Query 1218 GCTCTGGGCTTCAATTAGACGTTGAGACCTATAACACTATGATCGAAGCTTCCATGACGA 1277 |||||||||||||||||||||| |||| || |||| || ||||||||||||||||||||| Sbjct 119 GCTCTGGGCTTCAATTAGACGTCGAGATCTCTAACGCTTTGATCGAAGCTTCCATGACGA 178 Query 1278 AACAGGATTTCCTATCTGCGCTTACACTGTTTAGGGATATGCGAGAAACAAA-AGTA-TC 1335 | |||||||| |||||||| ||||| |||||||||||||| |||||| | | ||| | Sbjct 179 ATCAGGATTTTATATCTGCGTTTACATTGTTTAGGGATATGAGAGAAA-ATAGAGTGGTG 237 Query 1336 AGATTTGAAAAG-ATGCTACTTAACAATAATGACAGGTCTCCTTGAGAATCAGAGACCTG 1394 |||||||| | | | ||||||||||||||||||||||| |||||||| |||||||||| Sbjct 238 -GATTTGAAGGGGA-GTTACTTAACAATAATGACAGGTCTTCTTGAGAACCAGAGACCTG 295 Query 1395 AGTTAATGGGAGAGTTTGTGGAGGAAGTTGTGGAAGATCCTCGCGTAGAAGTGAAGTCCC 1454 ||||||||| || |||| | || |||||||| ||||| ||||| || |||||||| |||| Sbjct 296 AGTTAATGGCAGCGTTTCTAGACGAAGTTGTTGAAGACCCTCGTGTTGAAGTGAATTCCC 355 Query 1455 ATGATTGGAATTCGATTATCCATGCCTTCTGCAAATCTGGGCGTCTAGAAGATGCAAAGA 1514 ||||||||||||||||||| |||||||| || ||||| |||||||| ||||||||| || Sbjct 356 ATGATTGGAATTCGATTATTCATGCCTTTTGTAAATCCGGGCGTCTGGAAGATGCACGGA 415 Query 1515 GTACATTCAGAAGGATGGCTTTCCTTCAGT-ACGAGCCAAATAACCAGACATACTTGTCG 1573 | |||||||||||||||| |||||| | || | |||||||| |||||||||||||| || Sbjct 416 GGACATTCAGAAGGATGGTTTTCCTAC-GTTATGAGCCAAACAACCAGACATACTTATCT 474 Query 1574 TTGATCAATGGATATGTGAGCTGCGAGAAGTACTTCGAGGTGGTGGTTTTGTGGAAAGAG 1633 ||||| ||||||||||||||| | || |||||||| | || || | |||||||| ||| Sbjct 475 TTGATTAATGGATATGTGAGCGGGGAAAAGTACTTTAACGTCCTGCTCTTGTGGAACGAG 534 Query 1634 -TTCAAAGACAAGA-AT-G-C-----A---A-A-AC----T--AGA---G--CATGCTCT 1668 || |||| |||| || | | | | | | | ||| | |||||||| Sbjct 535 ATT-AAAGGTAAGATATCGTCGGTGGAGGCAGAGAAGAGGTCCAGACTAGATCATGCTCT 593 Query 1669 TG-CAGATGCGTTCTTGAATGCATTAGTCAAAGGAGGGTTCTTTG--GCA-CGGCATTGC 1724 | | ||||| |||||| | ||||| || |||||||| ||||||| ||| || || || Sbjct 594 AGTC-GATGCATTCTTGTACGCATTGGTGAAAGGAGGATTCTTTGATGCAGCG--AT-GC 649 Query 1725 AAGTGATAGAGAAATGTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTACAAGGCAA 1784 ||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 650 AAGTGGTAGAGAAATCTCAGGAGATGAAGATATTTGTGGATAAGTGGAGGTATAAG-CAA 708 Query 1785 -CGTTCATGGAGACTCAGAAGAACCTCAGATTGCCAAAGTTGAGGAAGAGGAAGATA-AA 1842 |||||||||||||||| ||||| ||||||||||||||| ||||||||||||| || || Sbjct 709 GCGTTCATGGAGACTCACAAGAAACTCAGATTGCCAAAGCTGAGGAAGAGGAAC-TACAA 767 Query 1843 GAAAATGGAGT-TGCTTGATGCCTTTAAGAACTGGGTTGGTCTTACCACATGA 1894 ||||||||| | | |||| |||||| |||||||||| |||||| | ||||||| Sbjct 768 GAAAATGGAATCT-CTTGTTGCCTTCAAGAACTGGGCTGGTCTCAACACATGA 819 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 93774618060 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5