BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476096 Length=1975 Score E Sequences producing significant alignments: (Bits) Value AT1G69610.1 | Symbols: | Protein of unknown function (DUF1666)... 2835 0.0 > AT1G69610.1 | Symbols: | Protein of unknown function (DUF1666) | chr1:26186954-26189489 FORWARD LENGTH=2051 Length=2051 Score = 2835 bits (1535), Expect = 0.0 Identities = 1834/1973 (93%), Gaps = 42/1973 (2%) Strand=Plus/Plus Query 30 TACTAACTTCGATTTCTCCAATAAAGGTTTTGGTGTTGGTAGTTTGAAACAGTTTGTGTA 89 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 39 TACTAACTTCGATTTCTCCAATAAAGGTTTTGGTGTTGGTGGTTTGAAACAGTTTGTGTA 98 Query 90 CGGAAACACTTTCATAGTTCTCGATGCTTTCTGGGTTTCTTTCTCTAATCTCTTCTTCTT 149 ||||||||||||||| |||||||||||||||||||||||||||||||| || |||| Sbjct 99 CGGAAACACTTTCATTGTTCTCGATGCTTTCTGGGTTTCTTTCTCTAA-----TC-TCTT 152 Query 150 CAGAGTTAATTCAGACAAAGAGACAAGTTTGGTCGTGTTCGAGAAACAGAACACAAACGG 209 |||||||||| |||||||||||||||| |||||| |||||||||||||||||||||| | Sbjct 153 CAGAGTTAATCCAGACAAAGAGACAAGCTTGGTCTTGTTCGAGAAACAGAACACAAAAGA 212 Query 210 TTCCTCTGTTTACGGAGATTATCAAGATCAAAAGCAAATTTGTGGAACACAAGACGATGA 269 ||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct 213 TTCCTCTGTTTTTGGAGATCATCAAGATCAAAACCAAATTTGTGGAACACAAGACGATGA 272 Query 270 TCAGATGGAAAGTTCTCTGGTTTCGGA-TAGCAAGAGATGCGAATTTTATT-C-A-GACA 325 |||||||||||| ||||||||||| || ||||||||||||||| ||||||| | | ||| Sbjct 273 TCAGATGGAAAGCTCTCTGGTTTC-GATTAGCAAGAGATGCGAGTTTTATTCCGACAACA 331 Query 326 AAAGTAGCGTTGGTTTTGTAGAAGAGCCTAAAGCGTTTAGCTTTAAGTTTCATGAGTACT 385 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 332 AAAGTATCGTTGGTTTTGTAGAAGAACCTAAAGCGTTTAGCTTTAAGTTTCATGAGTATT 391 Query 386 CTGCTAGTACTGTTCAGGAGGAGGAGAAGAAGAAGATGGGGAATTTCTCTGATGAAAACA 445 |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| | Sbjct 392 CTGCTATTACTGTTCAGGAGGAGGAGAAGAAGAAGATGGTGAGTTTCTCTGATGAAAAAA 451 Query 446 CGAGTTCCATGGTTTTGGAGGAATCAGAATCAGA--G------G-AGGAACACGTGAAAG 496 |||||||||||||||||||| ||||||||||||| | | ||||||||||||||| Sbjct 452 CGAGTTCCATGGTTTTGGAGAAATCAGAATCAGATGGTTTTATGAAGGAACACGTGAAAG 511 Query 497 AAGAGATGTTGGTTTATGAGTTCATGAGTTGTGGTGTTTTGAAAGAATCATTAGTCCACG 556 |||||||||||||||||||||||||||||||||||||||| ||||| ||||| || |||| Sbjct 512 AAGAGATGTTGGTTTATGAGTTCATGAGTTGTGGTGTTTTAAAAGAGTCATTGGTTCACG 571 Query 557 AGAATTTTGTTGGTGGTCAAGAAAACTTGTTTGATGATGATGATGGGTTTATAGAACTAA 616 ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct 572 AGAATCTTGTTGGTGGTGAAGACAACTTGTTTGATGATGATGATGGGTTTATAGAACTAA 631 Query 617 ACCCAAGTTTACAGATTTCTAACTTTGCTTAT------G--G-AGAAGAAGAGTTTATGC 667 ||||||||||||||||||| |||||||||||| | | ||||||||||||||| | Sbjct 632 ACCCAAGTTTACAGATTTCAAACTTTGCTTATGGAGAAGAAGAAGAAGAAGAGTTTATAC 691 Query 668 AGAAAGAAGAAGAGAGGAAAATGGGTTTTGATGAACAAGAAGAGGTATATGATGAGTTTG 727 | | ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 692 ACAGAGAAGAAGAGATGAAAATGGGCTTTGATGAACAAGAAGAGGTATATGATGAGTTTG 751 Query 728 ACGATGGTTCAGATTCAGACGATGATGAGTTTGAGCATAGTGATGTGATTGAGAAATTGA 787 | ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 752 ATGATGGTTCAGATTCAGATGATGATGAGTTTGAGCATAGTGATGTGATTGAGAAGTTGA 811 Query 788 AAACAGAACTAAGGGCCGCAAGAACAGGAGGATTGTGCACTATTCTTGAGGAATCAGAGA 847 |||||||| ||||| | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 812 AAACAGAATTAAGGACTGCAAGGACAGGAGGATTGTGCACTATTCTTGAGGAATCAGAGA 871 Query 848 CTCCATTACAAGAGCTGAAACCACTCAAGATCGAACCAAAACCAGATCAACACAAAGACA 907 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 872 CTCCATTACAAGAGCTGAAACCACTCAAGATTGAACCAAAACCAGATCAACACAAAGACA 931 Query 908 GAATTGCTGAAATTCACAAGGTTTACAAGAACTATGTGGTTAAAATGCGAAAACTCGATG 967 |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct 932 GAATTGCTGAAATTCACAAGGTTTACAAGAACTACGCGGTTAAAATGCGAAAACTCGATG 991 Query 968 TCATCGATTCTCAAACAATGCATTCCATCAGTTTGCTAAAGCTAAAGGAATCATCTGAAC 1027 |||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||| Sbjct 992 TCATCGATTCTCAAACAATGCATTCCATCAGTTTGCTAAAGCTAAAAGATTCATCTAAAC 1051 Query 1028 CGAGCAGAAACACCGATAAACCGCCTAAATCGTCTCTGCATCAGAATATATGGCCATTCA 1087 | || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1052 CTAGTAGAAACACTGATAAACCGCCTAAATCGTCTCTGCATCAGAATATATGGCCATTCA 1111 Query 1088 AGAAACATAAGCTTGAATGTGACCCGATTGAGAGACTTGTGAAAGAAGCAAGCAGAGACT 1147 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1112 AGAAACATACGCTTGAATGTGACCCGAGTGAGAGACTTGTGAAAGAAGCAAGCAGAGACT 1171 Query 1148 TTGAGACTGTCTATGTAGGCCAAGTTTGTCTCTCGTGGGAGATGCTTCGATGGCAATACG 1207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1172 TTGAGACTGTCTATGTAGGCCAAGTTTGTCTCTCGTGGGAGATGCTTCGATGGCAATACG 1231 Query 1208 -CTAAAGTCTTGGAATTTGATTCTCAGGTTACTACTTATCAATACAATTTAGTTGCTGGA 1266 | |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 1232 AC-AAAGTCTTGGAATTTGATTCACAGGTTACTACTTATCAATACAACTTAGTAGCTGGA 1290 Query 1267 GAGTTTCAGTTATTCCAAGTTCTGCTTCAACGGTTTGTGGAGAATGAACCGTTTCAAAAC 1326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1291 GAGTTTCAGTTATTCCAAGTTCTGCTTCAACGGTTTGTGGAGAATGAACCGTTTCAGAAC 1350 Query 1327 TCCTCTAGAGTTGAGACTTACTTAAAGAACCGTCGCCATTTCCATAATTTTCTTCAGATT 1386 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 1351 TCCTCTAGAGTTGAGACTTACTTAAAGAACCGTCGCCATTTCCAGAATTTCCTTCAGATT 1410 Query 1387 CCACTTGTTAGAGATGATCGTTCCTCAAAGACTAACAAGAAATGTAGAAACGAAGGGGAA 1446 ||||||||||||||||| ||||| || |||| | |||||||||| | ||||| ||| Sbjct 1411 CCACTTGTTAGAGATGACCGTTCTTCGAAGA--A----GAAATGTAGATATGAAGGAGAA 1464 Query 1447 TTCGCGGTAAAGATTGAAATGTTGAGAGAGATTATCCGAGAATCGATGAGTGTTTTTTGG 1506 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 1465 TTCGCGGTAAAGACTGAAATGTTGAGAGAGATTATCCGAGAGTCGATGAGTGTTTTCTGG 1524 Query 1507 GAGTTTCTTTGTGCAGACAAAGATGAGTTTACTTCAATAATAAAAGTTTCTCACCAAACT 1566 ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||| Sbjct 1525 GAGTTTCTTTGTGCAGACAAAGACGAGTTTACTTCAATGATGAAAGTTTCTCACCAAACT 1584 Query 1567 CAAGTCTCTCCACAAGATCCTCTAGACCTTGAGCTCTTGACAGATATCAGAACTGATCTC 1626 |||||||||||||| ||| || |||||||||||||||||||||||||||||||| ||||| Sbjct 1585 CAAGTCTCTCCACAGGATTCTTTAGACCTTGAGCTCTTGACAGATATCAGAACTCATCTC 1644 Query 1627 CAAAAGAAGGATAAGAAGCTAAAGGAAATACTAAGAAGCCAAAGCTGTATAGTGAAGAAG 1686 |||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1645 CAAAAGAAAGAGAAGAAGCTAAAGGAAATACAAAGAAGCCAAAGCTGTATAGTGAAGAAG 1704 Query 1687 ATAAAGAAGAATGAGTCAAAGAGTAATGTTGGTGTGAAGGATGAGTTACTGATAGCTCAA 1746 ||||||||||||| |||||||||| | |||||||||||||||| ||||| |||||| || Sbjct 1705 TTAAAGAAGAATGAATCAAAGAGTAGTATTGGTGTGAAGGATGAATTACTAATAGCTAAA 1764 Query 1747 ATTGAACTGAGACTGGTTTCAAGAGTGATGAACATGTCGAAACTTACCACCGAGAAGTTA 1806 |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| Sbjct 1765 ATTGAACTGAGACTGGTTTCAAGAGTGATGTACATGTCGAAACTTACTACTGAGAAGTTA 1824 Query 1807 GTTTGGTGT-AGGGAGAAACTTGAAAAGATCAGCTTCAACGGTCGGAAGATTCACATGGA 1865 ||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1825 CATTGGTGTCAGG-AGAAACTTGAAAAGATCAGCTTCAACGGTCGGAAGATTCATATGGA 1883 Query 1866 ACCATCTTTCTCGTTGTTACCTTGTTGAGCCATCTCTGCCTATAGATTAGATCATAGATA 1925 ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1884 ACCATATTTCTCGTTGTTACCTTGTTGAGCCATCTCTGCGTATAGATTAGATCATAGATG 1943 Query 1926 TTGGAATATTATGGCTTCA---GATCCGGGAAGATGTCTTTTTGTTGTTGTTC 1975 |||||| | |||||||||| ||||| ||||||||||||||||||||||||| Sbjct 1944 TTGGAACAATATGGCTTCATCAGATCCAGGAAGATGTCTTTTTGTTGTTGTTC 1996 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97840862205 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5