BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476162 Length=940 Score E Sequences producing significant alignments: (Bits) Value AT1G70420.1 | Symbols: | Protein of unknown function (DUF1645)... 1042 0.0 > AT1G70420.1 | Symbols: | Protein of unknown function (DUF1645) | chr1:26539574-26540762 REVERSE LENGTH=1189 Length=1189 Score = 1042 bits (564), Expect = 0.0 Identities = 795/896 (89%), Gaps = 58/896 (6%) Strand=Plus/Plus Query 1 ATGCAAGTTGTTGCTCCTTCATCTCCGGCGTCGAAATTCGCCGGAAAAGAGAGATTTTCA 60 ||||||||| || ||||||| ||||||||| ||| ||||||||||||||||||||||||| Sbjct 105 ATGCAAGTTATTTCTCCTTCGTCTCCGGCGCCGAGATTCGCCGGAAAAGAGAGATTTTCA 164 Query 61 GAAGTTTACGGCGAACTAAACGACGATTTTGGCTCAAAACTgaagataagttctacagag 120 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| Sbjct 165 GAAGTTTACGGCGAACTAAACGACGATTTTGGCTCTAAACTGAAGATTAGTTCTAAAGAG 224 Query 121 gaagaaaacagagat-a--a--c--g----a-t--gaa-g-aa--ga-aa-ga-ga--a- 156 ||||||||||||||| | | | | | | ||| | || || || || || | Sbjct 225 GAAGAAAACAGAGATGATGATTCATGGTGGAATCAGAACGGAACTGATAAAGATGATGAA 284 Query 157 g-aagag-------TT-CTCATTCGCAAGTGTAAACGCAGAGAATTCACCGATAACCGCA 207 | ||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct 285 GGAAGAGAAGAAGATTTCTCATTCGCAAGTGTAAACGCAGATAATTCACCGATAACCGCA 344 Query 208 GAAGAAGCGTTCGAAGATGGTCAGATCCGACCGGTTTATCCTCTGTTTAACCGGAATTTT 267 || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct 345 GATGAAGCATTCGAAGACGGTCAGATCCGACCGGTTTATCCTCTGTTTAACCGGAATATT 404 Query 268 TTCTTCGATGATCCAAAGGAGGAAACTTTACGTTCACCTCTCAAGAAACTCTTCGTTGAA 327 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct 405 TTCTTCGATGATCCAGAGGAAAAAACTTTACGTTCACCTCTCAAGAAACTCTTCGTTGAA 464 Query 328 GCCACAACCACCgaagaagaagaagaagaagaagaGTCAGAGACGGTGGGTCCGTTTTGT 387 |||||||||| | ||||||||||||||||| | ||||| ||||||||||| | |||| Sbjct 465 TCCACAACCAC--A-GAAGAAGAAGAAGAAGA-G--TCAGATACGGTGGGTCCATATTGT 518 Query 388 TCATGGTCAAATCGTACGGTGGAGGAAGCATCACCGGAGACTTGTCGGAAAAGTAACTCA 447 |||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 519 TCATGGACAAATCGTACGGTGGAGCAAGCATCACCAGAGACTTGTCGGAAAAGTAACTCA 578 Query 448 ACAGGGTTTTCAAAGCTATGGAGGTTTAGAGATCTTGTTTTAAGAAGTAACAGTGATGGA 507 |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 579 ACAGGGTTCTCAAAGCTATGGAGATTTAGAGATCTTGTTTTGAGAAGTAACAGTGATGGA 638 Query 508 AAAGATGCGTTTGTGTTTTTAAGCAACGGCTCTTCATCTTCGTCGTCGACATCG-C--CG 564 ||||||||||||||||||||||||||||||||||||||| | |||||||| ||| | || Sbjct 639 AAAGATGCGTTTGTGTTTTTAAGCAACGGCTCTTCATCTACATCGTCGACGTCGTCTACG 698 Query 565 A-----A-ATTGAGCGGTGTG---AAGTCGTCGgagaaagggaaagagaaaacgaagacg 615 | |||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct 699 GCGGCGAGATTGAGTGGTGTGGTGAAGTCGTCGGAGAAAGGGAAAGAGAAAACGAAGACG 758 Query 616 gagaagaagaag-a-a-gatgagaacgaaaTCGGCACATGAGAAATTGTATATGAGAAAC 672 || ||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 759 GATAAGAAGAAGGATAAGATGAGAACGAAATCGGCACATGAGAAATTGTATATGAGAAAC 818 Query 673 AGAGCAATGAGAGAAGAAGGAAAACGAAGATCGTATCTACCGTATCAACATGTTGGATTC 732 |||||||||||||||||||| ||||||||||||||||| |||||| |||||||||| ||| Sbjct 819 AGAGCAATGAGAGAAGAAGGGAAACGAAGATCGTATCTTCCGTATAAACATGTTGGGTTC 878 Query 733 TTCACTAATGTTAATGGTTTAACCAGAAATGTTCATCCATTTTGATTAAACCGGTCT-T- 790 |||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| | Sbjct 879 TTCACTAATGTTAATGGTTTAACCAGAAATGTTCATCCCTATTGATTAAACCGATCTGTC 938 Query 791 GTTTCAAAATTTCTACCGACAAATCTTTGCCTTTGTGTAT-TATATAACCTTTTTT 845 || |||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| Sbjct 939 GTACCAAAATCTCTACCGACAAATCTTTGCCTTT-TGTATATATCTAACCTTTTTT 993 Score = 128 bits (69), Expect = 9e-29 Identities = 109/126 (87%), Gaps = 11/126 (9%) Strand=Plus/Plus Query 824 TGTGTATTATATAACC-T-TTTTTGTAAGTAAAAGTGAAACTTTACTTATTTA-TTTCAC 880 ||||||||||| |||| | |||||||||||||||||||||||||||||||| | ||| | Sbjct 1002 TGTGTATTATAAAACCTTCTTTTTGTAAGTAAAAGTGAAACTTTACTTATTAACTTTT-C 1060 Query 881 GTTTTGTCTCATTTGATTAAtttttttt-tt-----ATGTAAAGTATTTTCTGATTTTGA 934 |||| || ||||||||||| |||||||| || |||||||||||||| ||||||||| Sbjct 1061 GTTT-GTATCATTTGATTAGTTTTTTTTCTTCTTTGATGTAAAGTATTTTTTGATTTTGA 1119 Query 935 AAGTAG 940 |||||| Sbjct 1120 AAGTAG 1125 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45964244505 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5