BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476235 Length=907 Score E Sequences producing significant alignments: (Bits) Value AT1G71030.1 | Symbols: ATMYBL2, MYBL2 | MYB-like 2 | chr1:26795... 1149 0.0 > AT1G71030.1 | Symbols: ATMYBL2, MYBL2 | MYB-like 2 | chr1:26795123-26796364 REVERSE LENGTH=986 Length=986 Score = 1149 bits (622), Expect = 0.0 Identities = 827/920 (90%), Gaps = 37/920 (4%) Strand=Plus/Plus Query 1 TCAACCCACCAGTCCAAGTCAAACCTATATCCTCTATCCATCCCCTAATCCTATATATCA 60 ||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct 1 TCAACCCACCAGTCCAAGTCAAACC----TCCTCAAGCCATCCCCTAATCCTATATATCA 56 Query 61 GTTTGCTTCTCGCAAACCACCTCATAATCAATCAACAGtttttttttaaaaaaaaaaaaC 120 |||| ||||||||||||||||||| |||| |||||||| |||| ||||||| || Sbjct 57 GTTT-CTTCTCGCAAACCACCTCACAATCTATCAACAG-----TTTT---AAAAAAAGAC 107 Query 121 ATAACTCAACCAATCTCACTTTGAAAAAGACATGAACAAGAGCCGCCTCCGTGCTCTCTC 180 ||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||| Sbjct 108 ATAACTCAACCAATCTCACTTTGAAAAAGACATGAACAAAACCCGCCTTCGTGCTCTCTC 167 Query 181 TCCGCCTTCCGGAATGCAACACCGTGGTAGAAGATGTCGATTGAGAGGAAGAAACTACAT 240 || |||||||| |||||||||||| || ||||||||||||||||| |||||||| | Sbjct 168 CCCACCTTCCGGTATGCAACACCGT--AAG-AGATGTCGATTGAGAGGTCGAAACTACGT 224 Query 241 AAGGCCAGAAGTTAAACAAAACAACTTCTCAAAAGATGAAGACGATCTCATCCTCAAGCT 300 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 225 AAGGCCAGAAGTTAAACAACGCAACTTCTCAAAAGATGAAGACGATCTCATCCTCAAGCT 284 Query 301 TCATGCACTTCTTGGCAATAGATGGTCATTGATAGCGGGCAGATTGCCTGGACGAACGGA 360 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 285 TCATGCACTTCTTGGCAATAGATGGTCATTGATAGCGGGAAGATTGCCAGGACGAACCGA 344 Query 361 CAACGAAGTTAGGATCCATTGGGAAACTTACTTAAAGAGGAAGCTCATGAAAATGGGAAT 420 ||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||| Sbjct 345 CAACGAAGTTAGGATCCATTGGGAAACTTACCTAAAAAGGAAGCTCGTAAAAATGGGAAT 404 Query 421 CGACCCAACTAATCATCGTCTCCACCACCACACCAACTACATTTCGAGACGAT-ACCTCA 479 ||||||||| ||||||||||||||||| ||||||||||||||||| ||||| | ||||| Sbjct 405 CGACCCAACCAATCATCGTCTCCACCATCACACCAACTACATTTCTAGACG-TCACCTCC 463 Query 480 ATTCCTCACGTAAGGAACATGAAAC-AGAGATTATTAGTGATCAATCTTCTTCAGTATCC 538 |||| |||| ||||||||||||||| | ||||||||||||||||||||||||| |||||| Sbjct 464 ATTCTTCACATAAGGAACATGAAACCA-AGATTATTAGTGATCAATCTTCTTCGGTATCC 522 Query 539 GAATCATCTGGTATAAGTACAATCTTACCCATTCCAAGTACCAATTGCTCGGAGGATAGT 598 ||||||| |||| ||| |||| || ||||||||||||||||||||||||||||||||| Sbjct 523 GAATCATGTGGTGTAA---CAATTTTGCCCATTCCAAGTACCAATTGCTCGGAGGATAGT 579 Query 599 ACTAGTACCGGACGAAGTCATTTGCCTGACCTCAACATCGCTCTCACCCCGACCGTGACT 658 |||||||||||||||||||||||||||||||| ||||| | ||||| |||| |||||||| Sbjct 580 ACTAGTACCGGACGAAGTCATTTGCCTGACCTAAACATTGGTCTCATCCCGGCCGTGACT 639 Query 659 TCTTTGCCAGCTGGTTGCCTTCAGGACTTTAGTGAATCCTCTAACAAAGGTTCAACAGGT 718 |||||||||||| |||||||||||||| ||| |||||||||| ||| |||||||||||| Sbjct 640 TCTTTGCCAGCTCTTTGCCTTCAGGACTCTAGCGAATCCTCTACCAATGGTTCAACAGGT 699 Query 719 CAAGAAACGCTTCTTCTATTCCAATGA-AAATTGTTGTATTTCTTTGTACACAT--GTTA 775 |||||||||||||||||||||| |||| |||| || |||||| ||||||||||| |||| Sbjct 700 CAAGAAACGCTTCTTCTATTCCGATGAGAAATGGT-GTATTTGTTTGTACACATTTGTTA 758 Query 776 CATTACAAAGGCCCCTATATTATAATATTCACTAGAGAGATG-TATAACGATGTTTGAAA 834 |||||||| || | |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 759 TATTACAAATGCAC--ATATTATAATATTCACTAGAGAGATGGTATAACGATGTTTGAAA 816 Query 835 TATGTTAATCCTGAATTGGACCGT-TG---A---AACAACTATTCTCTTAAATGTCTGGT 887 ||||||||||||||||||||||| || | |||||||||||||||||||||| ||| Sbjct 817 TATGTTAATCCTGAATTGGACCGGCTGGTCATTGAACAACTATTCTCTTAAATGTCCGGT 876 Query 888 TTTGTTTTCGGTGATTAGTA 907 | ||||||| |||||||||| Sbjct 877 TCTGTTTTCAGTGATTAGTA 896 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44306517654 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5