BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476279 Length=2721 Score E Sequences producing significant alignments: (Bits) Value AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 3570 0.0 AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 1003 0.0 AT1G71480.1 | Symbols: | Nuclear transport factor 2 (NTF2) fam... 387 4e-106 > AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:26932905-26935825 REVERSE LENGTH=2921 Length=2921 Score = 3570 bits (1933), Expect = 0.0 Identities = 2338/2531 (92%), Gaps = 38/2531 (2%) Strand=Plus/Plus Query 204 AGTCTAATTCCCAAGAAC-TCCCAAAACCCACAATGAATCAATGCTGATTGAGAGTCTTT 262 ||||| || |||||||| | || ||||||||| |||| ||||||||| ||||||||||| Sbjct 416 AGTCTTGTT-CCAAGAACTTTCC-AAACCCACATTGAACCAATGCTGAGTGAGAGTCTTT 473 Query 263 TTAAATCTCTTGGACATTTGGCCAGCCACGGTCATTTGCACGACGCTTTCAAAACGTTTT 322 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 474 TCAAATCTCTTGGACATTTGGCCAGCCACGGTCATTTGCACGACGCTTTCAAAACGTTTT 533 Query 323 CTCTTCTTCGTCTTCAATCTTCTCCTTCTGCAGTTTCAGGTGATGTTGTTTTGCATTCCG 382 ||||||||||||||||||| | | ||||||||||||||| ||| | ||||||||||||| Sbjct 534 CTCTTCTTCGTCTTCAATC-T-T-CTTCTGCAGTTTCAGATGACCTCGTTTTGCATTCCG 590 Query 383 CGGCTTCCCTTTTATCCGCTTGCGTTGATGTTCTTGCATTTGT-GCCGGGGCTGCAAATT 441 ||||||||||||||||||||||||||||||||| ||||||| | || |||| ||||| || Sbjct 591 CGGCTTCCCTTTTATCCGCTTGCGTTGATGTTCGTGCATTTTTAGCAGGGG-TGCAAGTT 649 Query 442 CACGCTCACTGTGTTTCGTCCGGTGTGGAATATCACTCTGCT-TTGGTCCCAAAGCTGGT 500 |||||||||||| ||||||| ||||| ||||||||||||| | || |||||||||||||| Sbjct 650 CACGCTCACTGTATTTCGTCGGGTGTCGAATATCACTCTG-TGTTAGTCCCAAAGCTGGT 708 Query 501 TACTTTTTACTCTGCTTTTAATCTTCACAGGGAAGCTCAATCGATTAATGAGAACTCAGA 560 ||| |||||||||||||| ||||| |||| |||||||||||||||| ||||||||| || Sbjct 709 TACCTTTTACTCTGCTTTCAATCTCCACAATGAAGCTCAATCGATTATTGAGAACTCTGA 768 Query 561 TATTTTGCATCCCTTACCTTGGAATGTGCTCATTGCTTCGTATGCCAAGAACGAGCTTTT 620 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 769 CATTTTGCATCCCTTACCTTGGAATGTGCTCATTGCTTCGTATGCCAAGAACGAGCTTTT 828 Query 621 TGAGGAGGTTGTTGCTGCTTACAAGAGAATGGTGAGCAAGGGAATTCGACCCGATGCCTT 680 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 829 TGAGGAGGTTATTGCTGCTTACAAGAGAATGGTGAGCAAGGGAATCCGACCCGATGCCTT 888 Query 681 CACTTATCCGTCTGTTCTCAAGGCCTGTGGTGAAACACTTGACGTTGCCTCTGGAAGAGT 740 |||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| || Sbjct 889 CACTTATCCGTCTGTTCTTAAGGCTTGTGGTGAAACACTTGACGTTGCCTTTGGAAGGGT 948 Query 741 GGTTCATGGTTCCATCGAGGTTAGCTCTTACAAGTGCAGCTTGTATGTTTGCAATGCATT 800 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 949 GGTTCATGGTTCCATCGAGGTTAGCTCTTACAAGTCCAGCTTGTATGTTTGTAATGCATT 1008 Query 801 GATCTCTATGTATAAAAGGTTTGGAAATGTGGGTATTGCTCGGAGGTTGTTTGATC-ATA 859 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | | Sbjct 1009 GATCTCTATGTATAAAAGGTTTAGAAATATGGGTATTGCTCGGAGGTTGTTTGATCGA-A 1067 Query 860 TGTCTGAAAGGGATGCTGTCTCATGGAATGCAGTTATAAACTGTTATACTTCGGTAGGCA 919 ||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||| Sbjct 1068 TGTTTGAAAGGGATGCTGTCTCATGGAATGCAGTGATAAACTGTTATGCTTCGGAAGGCA 1127 Query 920 TGTGGAGTGAAGCGTTTGAGCTTTTTGATAAAATGAGGTTCTCAGGTGTTGAATTCAGTG 979 ||||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||| Sbjct 1128 TGTGGAGTGAAGCGTTTGAGCTTTTCGATAAAATGTGGTTTTCAGGTGTTGAGGTCAGTG 1187 Query 980 TCATAACTTGGAATATTATTTCTGGAGGTTATTTGCATACAGGAAACTATGCAGGAGCTT 1039 |||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||||| Sbjct 1188 TCATAACTTGGAATATTATTTCTGGAGGTTGTTTGCAAACAGGAAATTATGTAGGAGCTT 1247 Query 1040 TGGGTTTGATCTCTAGGATGAGAAATTTCCCCACGAGCTTAGATCCTGTGGCTATGATTA 1099 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 1248 TGGGTTTGATCTCTAGGATGAGAAATTTTCCTACGAGCTTAGATCCTGTGGCTATGATTA 1307 Query 1100 TTGGTTTGAAGGCTTGCTCACTCATAGGAGCAATACGATTGGGAAAAGAGATTCACGGTC 1159 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1308 TTGGTTTGAAGGCTTGCTCTCTCATAGGAGCAATACGATTGGGAAAAGAGATTCACGGTC 1367 Query 1160 TTGCTATTCACCGTTCTTACGATGGGATTGACAATGTTCGAAACACGTTGATCACAATGT 1219 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1368 TTGCTATTCACAGTTCTTATGATGGGATTGACAATGTTCGAAACACGTTGATCACAATGT 1427 Query 1220 ACTCAAAATGCGATGACCTTAGGAACGCCTTTATAGTGTTTCAAAAGACTGAAGAAAATA 1279 ||||||||||| | ||||||||| ||||||| |||||||||| | ||||||||||||||| Sbjct 1428 ACTCAAAATGCAAAGACCTTAGGCACGCCTTAATAGTGTTTCGACAGACTGAAGAAAATA 1487 Query 1280 GTTTGTGTACTTGGAACTCTATTATTTCCGGTTATGCGCAAG-TGAATAAATCAGAAGAA 1338 |||||||||||||||||||||| |||||||||||||||| || |||| |||||||||||| Sbjct 1488 GTTTGTGTACTTGGAACTCTATCATTTCCGGTTATGCGC-AGCTGAACAAATCAGAAGAA 1546 Query 1339 GCCTCTTACCTGCTGAGGGAGATGTTGCTTGCTGGCTTTCAGCCAAATTTCATTACACTT 1398 |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 1547 GCCTCTCACCTGCTGAGGGAGATGTTGGTTGCTGGCTTTCAGCCAAATTCCATTACACTA 1606 Query 1399 GCAAGCATTCTCCCTCTTTGTGCTCGGATTGCAAACCTGCAACATGGAAAAGAGTTTCAT 1458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1607 GCAAGCATTCTCCCTCTTTGTGCTCGGATTGCAAACCTGCAACATGGAAAAGAGTTTCAT 1666 Query 1459 TGCTACATCCTGAGGCGCAAGTGCTTCAAGGACTATACAATGCTGTGGAACTCCCTTGTT 1518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1667 TGCTACATCCTGAGGCGCAAGTGCTTCAAGGACTATACAATGCTGTGGAACTCCCTTGTT 1726 Query 1519 GATGTTTATGCAAAATCAGGAAAAATTGTAGCTGCGAAGCAAGTATCTAATCTGATGAGC 1578 ||||||||||||||||| ||||| ||||||||||| |||||||||||| || |||||||| Sbjct 1727 GATGTTTATGCAAAATCGGGAAAGATTGTAGCTGCAAAGCAAGTATCTGATTTGATGAGC 1786 Query 1579 GAAATAGACGAAGTAACGTACACTTCCTTGATAGATGGATACGGAAATCAGGGTGAAGGG 1638 ||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 1787 AAAAGAGACGAAGTAACATACACTTCCTTGATAGATGGATACGGAAATCAAGGTGAAGGG 1846 Query 1639 CGAGTTGCCTTGGCCCTGTTCGACGAGATGATCAGATCTGGTATTAAACCTGACCCTGTA 1698 |||| ||||||||||||||| | ||||||| ||||||||||||||||||||||| |||| Sbjct 1847 GGAGTAGCCTTGGCCCTGTTCAAGGAGATGACCAGATCTGGTATTAAACCTGACCATGTA 1906 Query 1699 ACCATGGTTGCAGTTCTGTCAGCCTGCAGTCATTCCAAGTTAGTCCATGAAGGCCAAAGG 1758 ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 1907 ACCGTGGTTGCAGTTCTATCAGCCTGCAGTCATTCCAAGTTAGTCCATGAAGGTGAAAGG 1966 Query 1759 CTATTTATGAAGATGCAGCCTAAGTATGGTATACGGCCTTGTCTTCAACACTTTTCTTGT 1818 || ||||||||||||||| | ||||||||||||| |||||||||||||| ||||||||| Sbjct 1967 CTGTTTATGAAGATGCAGTGTGAGTATGGTATACGTCCTTGTCTTCAACATTTTTCTTGT 2026 Query 1819 ATGGTTGATCTCTATGGCAGAGCGGGTTTCCTAGCGAAAGCCAAAGACATAATTCACAGA 1878 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | Sbjct 2027 ATGGTTGATCTCTATGGCAGAGCAGGTTTCCTAGCAAAAGCCAAAGACATAATTCACA-A 2085 Query 1879 -ATGCCACATGAGCCATCCGGTGCCACATGGGCAACTCTACTGAACGCTTGTCACATCCA 1937 |||||| || |||||||||||||||| ||||| || ||||||||||| ||||||||||| Sbjct 2086 TATGCCATATAAGCCATCCGGTGCCACGTGGGCTACCCTACTGAACGCGTGTCACATCCA 2145 Query 1938 CGGGAACACAGAGATTGGTAAATGGGCTGCAGAAAAGCTTTTGGAGATGAAGCCAGAGAA 1997 ||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 2146 TGGGAACACACAGATTGGTAAATGGGCAGCAGAAAAGCTCCTGGAGATGAAGCCAGAGAA 2205 Query 1998 CCCGGGATACTATGTATTGATTGCAAATATGTATGCAACTGCTGGTTCTTGGAGCAAGCT 2057 |||||||||||| || || |||||||||||||||||| |||||||||||||||||||||| Sbjct 2206 CCCGGGATACTACGTGTTAATTGCAAATATGTATGCAGCTGCTGGTTCTTGGAGCAAGCT 2265 Query 2058 TGCTGAAGTGAGGACTATCATGAGGGACTTGGGTGTGAGAAAAG-ATCCTGGGTGTGCTT 2116 |||||||||||||||||| ||||||||||||||||||| ||||| ||||||| ||||||| Sbjct 2266 TGCTGAAGTGAGGACTATAATGAGGGACTTGGGTGTGA-AAAAGGATCCTGGCTGTGCTT 2324 Query 2117 GGATCAATACAGATTCTGGGTTTTCACTGTTTTTGGTGGGGGACACATCAAACCCTCGA- 2175 ||||| | ||||||||||| ||||||||||||| ||||||||||||||||| |||| || Sbjct 2325 GGATCGACACAGATTCTGGATTTTCACTGTTTTCGGTGGGGGACACATCAAGCCCT-GAA 2383 Query 2176 GCATCTGATGCTTATCCTCTGTTAGATGGACTGAATCAGCTGATGAAAGACACTGCTGGT 2235 |||| | || |||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 2384 GCATGTAATACTTATCCTCTATTAGATGGACTGAATCAGCTGATGAAAGACAATGCTGGT 2443 Query 2236 TATGCCATCAACGAGGAGCAAAGTTCAGATGAAGAACTTCTTCAAGAAATAGGATGAAAG 2295 ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| | Sbjct 2444 TATGCCATCAATAAGGTGCAAAGTTCAGATGAAGAACTTCTTCAAGAAATGGGATGAAGG 2503 Query 2296 TGACCCTCGTCGATCTGAGGATGATCAACTGGAGATTTATTTAGTTAATAGCACAT-GTT 2354 ||| | | |||||||||||||||||||| ||||||||||||||||||||| || Sbjct 2504 TGAA----GA-G--CTGAGGATGATCAACTGGAGCTTTATTTAGTTAATAGCACATAGT- 2555 Query 2355 CTATATACGCCTGCACATCATCAGACCGACATGAAGTTGGATACATATGACAACTTCTAG 2414 ||||||||||||||| |||| ||||| || | |||||||||||| ||||||| |||||| Sbjct 2556 CTATATACGCCTGCATATCACCAGACTGAGAACAAGTTGGATACACATGACAAGTTCTAG 2615 Query 2415 TATATACATTAAC-ACAAATTGGACAATGGTGGGGGATTGCTGCCGAAGTATTTTTCCTA 2473 ||||||||||||| | ||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 2616 TATATACATTAACTA-AAATTGGACAATGGTGGGG-ATTGCTGCGGAAGTATTTTTCCTA 2673 Query 2474 TTTACCACAAAGAAAACCTT-TATTTGTGAGCTGATTCACTTCATCAAGCAAAAGCGTTA 2532 | || |||||||||||| || |||| |||||||||||||||||||| ||||| ||| || Sbjct 2674 TATAACACAAAGAAAAC-TTATATT-GTGAGCTGATTCACTTCATCGAGCAAGAGCTTTG 2731 Query 2533 TAGTTACATCAGAATTGGTCAGCCAGTTGAGGAAATTTCTGCAGCAGCCAGGTAACTCCC 2592 || | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2732 TAATGCCATCAGAATTGGTCGGCCAGTTGAGGAAATTTCTGCAGCAGCCAGGTAACTCCC 2791 Query 2593 TTTATAGCAGCCTGAAGACACAAA-TGCAAAAGATGTTGAAT-TTGCATTACGTCTGCAA 2650 |||||||||||||||| ||||||| |||||||| |||| ||| || |||||| ||||||| Sbjct 2792 TTTATAGCAGCCTGAATACACAAAATGCAAAAGCTGTTAAATCTT-CATTACCTCTGCAA 2850 Query 2651 TTTCAAATGCATCCACACAATCAAAATTAATAGTAGCTCATGTTACCAGAACTGTTTCTC 2710 ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2851 TTTCAAACACATCCACACAATCAAAATTGATAGTAGCTCATGTTACCAGAACTGTTTCTC 2910 Query 2711 CAGGTTTGATT 2721 ||||||||||| Sbjct 2911 CAGGTTTGATT 2921 Score = 209 bits (113), Expect = 9e-53 Identities = 191/225 (85%), Gaps = 19/225 (8%) Strand=Plus/Plus Query 1 TCTCGTTGCGTTTTTTCGCGCGCATTCTTCCACTTTGCTTTGTTTGTTCCAATATCTATC 60 ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||| || Sbjct 40 TCTTGTTGCGTTTTTTCGCGCGCATTCTTCCGCTTTGCTTTG-TTGTTCCAATATC--TC 96 Query 61 TCTCTTACCTATGTTTCATTCATTCTCAATCATATATAGATTCTGCTATGGATATACTCT 120 |||||||||| |||||| || |||||||||| |||||| |||||||||| ||||||||| Sbjct 97 TCTCTTACCTCTGTTTCGTT-ATTCTCAATC--ATATAGGTTCTGCTATGTATATACTCT 153 Query 121 CTGCTTTTCGGGTTTAAGTGTGTAGAAAGTATTGG-T------T-----CACCACGTGTT 168 | ||| || ||||| || |||||| | |||| ||| | | ||||||||||| Sbjct 154 CAGCTCTTAGGGTTCAAATGTGTATATAGTA-TGGTTCAGCAATCAGCACACCACGTGTT 212 Query 169 CGATGATATGCTTCAATGAAGTTTTCTCACCTTGTAGTCTAATTC 213 ||||||||||||||||||||||||||||| |||||||||| |||| Sbjct 213 CGATGATATGCTTCAATGAAGTTTTCTCAACTTGTAGTCTTATTC 257 > AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:8076573-8079091 FORWARD LENGTH=2433 Length=2433 Score = 1003 bits (543), Expect = 0.0 Identities = 1366/1757 (78%), Gaps = 81/1757 (5%) Strand=Plus/Plus Query 421 TTTGTGCCGGGGCTGCAAATTCACGCTCACTGTGTTTCGTCCGGTGTGGAATATCACTCT 480 ||||| || || | |||| |||| ||||| ||| | ||||| ||| |||| | | ||||| Sbjct 557 TTTGTTCCTGGCCAGCAACTTCATGCTCATTGTATCTCGTCGGGTTTGGAGTTTGACTCT 616 Query 481 GCTTTGGTCCCAAAGCTGGTTACTTTTTACTCTGCTTTTAATCTTCAC-AG-GGAAGCTC 538 | ||||||||||||| |||| ||||| |||||||||||||||| || | | ||||||| Sbjct 617 GTTTTGGTCCCAAAGTTGGTCACTTTCTACTCTGCTTTTAATC-TC-CTTGACGAAGCTC 674 Query 539 A-ATCGATTAATGAGAACTCAGATATTTTGCATCCCTTACCTTGGAATGTGCTCATTGCT 597 | | | |||| ||||||||| || |||||||||||||| || |||||||||||||| | | Sbjct 675 AGA-CCATTACTGAGAACTCTGAGATTTTGCATCCCTTGCCGTGGAATGTGCTCATCGGT 733 Query 598 TCGTATGCCAAGAACGAGCTTTTTGAGGAGGT-TGTTGCTGCTTACAAGAGAATGGTGAG 656 |||||| | |||| | ||| |||| || |||| ||| ||||||| ||||| |||| Sbjct 734 TCGTATATTAGGAACAAAAGGTTTCAGGA-GTCTGTTTCTGTTTACAAGCGAATGATGAG 792 Query 657 CAAGGGAATTCGACCCGATGCCTTCACTTATCCGTCTGTTCTCAAGGCCTGTGGTGAAAC 716 || |||||| || | |||| || ||||| ||||||||| ||||||| |||| | | Sbjct 793 TAAAGGAATTAGAGCGGATGAATTTACTTACCCGTCTGTTATCAAGGCTTGTGCAGCATT 852 Query 717 ACTTGACGTTGCCTCTGGAAGAGTGGTTCATGGTTCCATCGAGGTTAGCTCTTACAAGTG 776 ||| || |||| | ||| ||||| |||||||| || || |||||||||||| ||| ||| Sbjct 853 ACTGGATTTTGCATATGGGAGAGTTGTTCATGGCTCTATTGAGGTTAGCTCTCACAGGTG 912 Query 777 CAGCTTGTATGTTTGCAATGCATTGATCTCTATGTATAAAAGGTTTGG-AAATGTGGGTA 835 | ||||||||| ||||| || ||||| |||||||||||||| ||||| ||| |||| | Sbjct 913 TAACTTGTATGTCTGCAACGCGTTGATATCTATGTATAAAAGATTTGGTAAA-GTGGATG 971 Query 836 TTGCTCGGAGGTTGTTTGATCA-TATGTCTGAAAGGGATGCTGTCTCATGGAATGCAGTT 894 |||||||||| |||||||| || ||||||||||||||||||||||||||||||||| | Sbjct 972 TTGCTCGGAGATTGTTTGA-CAGGATGTCTGAAAGGGATGCTGTCTCATGGAATGCAATA 1030 Query 895 ATAAACTGTTATACTTCGGTAGGCATGTGGAGTG-AAGCGTTTGAGCTTTTTGATAAAAT 953 || |||||||||||||| | || | || || | |||| ||| ||||| |||||| ||| Sbjct 1031 ATCAACTGTTATACTTCAGAAGAAAAGTT-AGGGGAAGCTTTTAAGCTTCTTGATAGAAT 1089 Query 954 G-AGGTTCTCAGGTGTTGAATTC-AGTGTCATAACTTGGAATATTATTTCTGGAGGTTAT 1011 | | | ||| ||||| ||| | ||| | |||||||||| | || ||||||||| | Sbjct 1090 GTATCT-CTCTGGTGTCGAAG-CGAGTATTGTAACTTGGAACACAATAGCTGGAGGTTGT 1147 Query 1012 TTGCATACAGGAAACTATGCAGGAGCTTTGGGTT-TGATCTCTAGGATGAGAAATTTCCC 1070 ||| | ||||||| || ||| |||||| || || | | | |||||||||||| | Sbjct 1148 TTGGAGGCAGGAAATTACATAGGGGCTTTGAATTGTGTTGT-TGGGATGAGAAATTGCA- 1205 Query 1071 CACG-A-GCTTAGATCCTGTGGCTATGATTATTGGTTTGAAGGCTTGCTCACTCATAGGA 1128 | | | | ||| | |||| |||||||||| |||||| ||||| ||||||| ||| ||| Sbjct 1206 -ATGTAAGAATAGGTTCTGTAGCTATGATTAATGGTTTAAAGGCATGCTCACACATTGGA 1264 Query 1129 GCAATACGATTGGGA-AAAGAGATT-CACGGTCTTGCT-ATTC--ACC-GT--TCTTACG 1180 || || | |||| |||| ||| || | |||| | || | | || | || | Sbjct 1265 GCGTTAA-AGTGGGGGAAAGT-ATTTCATTGCCTTG-TGATCCGTAGTTGTAGTTTTTCC 1321 Query 1181 -ATGGGATTGACAATGTTCGAAACACGTTGATCACAATGTACTCAAAATGC-GATGACCT 1238 ||| |||||||||||||| || ||||||||||||||||||||| |||| | ||| || Sbjct 1322 CATGATATTGACAATGTTCGGAATTCGTTGATCACAATGTACTCAAGATGCAG-TGATCT 1380 Query 1239 TAGGAACGCCTTTATAGTGTTTCAAAAGACTGAAGAAAATAGTTTGTGTACTTGGAACTC 1298 |||| |||| |||||||||||||| || ||||| |||||||||| |||| ||||| || Sbjct 1381 TAGGCACGCGTTTATAGTGTTTCAGCAGGTTGAAGCAAATAGTTTGAGTACATGGAATTC 1440 Query 1299 TATTATTTCCGGTTATGCG--CAAGTGAATAAATCAGAAGAAGCCTCTTACCTGCTGAGG 1356 ||| |||||||||| ||| ||| || | |||||||||| |||||| |||||| | | Sbjct 1441 TATCATTTCCGGTTTTGCATACAAC-GAG-AGATCAGAAGAAACCTCTTTCCTGCTCAAG 1498 Query 1357 GAGATGTTGCT-TGCTGGCTTTCAGCCAAATTTCATTACACTTGCAAGCATTCTCCCTCT 1415 ||||||||||| | |||| ||||| |||||| |||||| ||||| |||||||||||||| Sbjct 1499 GAGATGTTGCTCT-CTGGATTTCACCCAAATCACATTACGCTTGCTAGCATTCTCCCTCT 1557 Query 1416 TTGTGCTCGGATTGCAAACCTGCAACATGGAAAAGAGTTTCATTGCTACATCCTGAGGCG 1475 || ||||||| | | ||||||||||||||| ||||||||||| |||||||||||||| || Sbjct 1558 TTTTGCTCGGGTGGGAAACCTGCAACATGGGAAAGAGTTTCACTGCTACATCCTGAGACG 1617 Query 1476 C-AAGTGCTTCAAGGACTATACAATGCTGTGGAACTCCCTTGTTGATGTTTATGCAAAAT 1534 | || ||| |||||||| | ||| ||||||||||||||||| ||| | |||||||||| Sbjct 1618 CCAAA-GCTACAAGGACTGTTTAATCCTGTGGAACTCCCTTGTCGATATGTATGCAAAAT 1676 Query 1535 CAGGAAAAATTGTAGCTGCGAAGCAAGTATCTAAT-CTGATGAGCGAA-ATAGACGAAGT 1592 | || |||| ||||||| |||| ||||| | || | |||||| ||| | ||| |||| Sbjct 1677 CCGGTGAAATCATAGCTGCAAAGCGAGTATTTGATTC-GATGAG-GAAGAGGGACAAAGT 1734 Query 1593 AACGTACACTTCCTTGATAGATGGATACGGAAATCAGGGTGAAGGGCGA-GTTGCCTTGG 1651 || |||||||| ||||| |||||||| || | | |||| |||| || || || |||| Sbjct 1735 GACATACACTTCTTTGATCGATGGATATGGCAGGCTGGGTAAAGGA-GAAGTCGCATTGG 1793 Query 1652 CCCTG-TTCGACGAGATG-ATCAGATCTGGTATTAAACCTGACCCTGTAACCATGGTTGC 1709 | || ||| | || ||| | |||||| ||||| |||||||| | |||||| |||||||| Sbjct 1794 CA-TGGTTCAAGGATATGGA-CAGATCCGGTATCAAACCTGATCATGTAACTATGGTTGC 1851 Query 1710 AGTTCTGTCAGCCTGCAGTCATTCCAAGTTAGTCCATGAAGGCCAAAGGCTATTTATGAA 1769 |||| | ||||| ||||| |||||||| ||||| | |||||| || || | |||| ||| Sbjct 1852 AGTTTTATCAGCTTGCAGCCATTCCAATTTAGTGCGTGAAGGACACTGGTTGTTTACGAA 1911 Query 1770 GATGCAGCCTAAGTATGGTATACGGCCTT-GTCTTCAACACTTTTCTTGTATGGTTGATC 1828 |||| ||| | || ||||||||| |||| | ||| |||||| ||||||||||||||||| Sbjct 1912 GATGGAGCATGTGTTTGGTATACG-CCTTCGCCTTGAACACTATTCTTGTATGGTTGATC 1970 Query 1829 TCTATGGCAGAGCGGGTTTCCTAGCGAAAGCCAAAGACATAATTC-ACAGAATGCCACAT 1887 | ||| ||||||| |||| ||| | ||||||| ||| ||| ||| | | ||| || | Sbjct 1971 TTTATTGCAGAGCAGGTTACCTGGATAAAGCCAGAGATATA-TTCCATACAATACCTTAC 2029 Query 1888 GAGCCATCCGGTGCCACATGGGCAACTCTACTGAACGCTTGTCACATCCACGGGAACACA 1947 |||||||| |||| | || || ||||||||||| || || | |||||||||||||||| Sbjct 2030 GAGCCATCAAGTGCTATGTGTGCTACTCTACTGAAAGCGTGCCTCATCCACGGGAACACA 2089 Query 1948 GAGATTGGTAAATGGGCTGCAGAAAAGCTT--T--TGGAGATGAAGCCAGAGA-ACCCGG 2002 | ||||| | ||||||||||| ||| || | | || | |||||||| | || | Sbjct 2090 AACATTGGGGAGTGGGCTGCAGATAAG-TTACTACTAGAAACAAAGCCAGA-ACACTTAG 2147 Query 2003 GAT-ACTATGTATTGATTGCAAATATGTATGCAACTG-CTGGTTCTTGGAGCAAGCTTGC 2060 | | ||||| | ||| ||||| ||||||||||| | ||||||||||||||||||||| Sbjct 2148 G-TCACTATATGTTGCTTGCAGATATGTATGCAG-TAACTGGTTCTTGGAGCAAGCTTG- 2204 Query 2061 TGAA-G-TGAGGACTAT-CATGAGGGACTTGGGTGTGAGAAAAGA-TCCTGGGTGTGCTT 2116 | || | ||| |||| | | |||| |||||||| ||| ||||| || || || ||||| Sbjct 2205 T-AACGGTGAAGACTTTAC-TGAGTGACTTGGGCGTGC-AAAAGGCTCATGAGTTTGCTT 2261 Query 2117 GGATC-AATACAGATTC 2132 ||| || |||||||| Sbjct 2262 TGATGGAA-ACAGATTC 2277 > AT1G71480.1 | Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr1:26931940-26933313 FORWARD LENGTH=1017 Length=1017 Score = 387 bits (209), Expect = 4e-106 Identities = 271/300 (90%), Gaps = 8/300 (3%) Strand=Plus/Minus Query 2312 GAGGATGATCAACTGGAGATTTATTTAGTTAATAGCACAT-GTTCTATATACGCCTGCAC 2370 |||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| Sbjct 1017 GAGGATGATCAACTGGAGCTTTATTTAGTTAATAGCACATAG-TCTATATACGCCTGCAT 959 Query 2371 ATCATCAGACCGACATGAAGTTGGATACATATGACAACTTCTAGTATATACATTAAC-AC 2429 |||| ||||| || | |||||||||||| ||||||| ||||||||||||||||||| | Sbjct 958 ATCACCAGACTGAGAACAAGTTGGATACACATGACAAGTTCTAGTATATACATTAACTA- 900 Query 2430 AAATTGGACAATGGTGGGGGATTGCTGCCGAAGTATTTTTCCTATTTACCACAAAGAAAA 2489 ||||||||||||||| |||||||||||| |||||||||||||||| || ||||||||||| Sbjct 899 AAATTGGACAATGGT-GGGGATTGCTGCGGAAGTATTTTTCCTATATAACACAAAGAAAA 841 Query 2490 CCTTTAT-TTGTGAGCTGATTCACTTCATCAAGCAAAAGCGTTATAGTTACATCAGAATT 2548 | |||| |||||||||||||||||||||| ||||| ||| || || | |||||||||| Sbjct 840 -C-TTATATTGTGAGCTGATTCACTTCATCGAGCAAGAGCTTTGTAATGCCATCAGAATT 783 Query 2549 GGTCAGCCAGTTGAGGAAATTTCTGCAGCAGCCAGGTAACTCCCTTTATAGCAGCCTGAA 2608 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 782 GGTCGGCCAGTTGAGGAAATTTCTGCAGCAGCCAGGTAACTCCCTTTATAGCAGCCAGAA 723 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 135149744442 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5