BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476326 Length=2208 Score E Sequences producing significant alignments: (Bits) Value AT1G71960.1 | Symbols: ABCG25, ATABCG25 | ATP-binding casette f... 3210 0.0 > AT1G71960.1 | Symbols: ABCG25, ATABCG25 | ATP-binding casette family G25 | chr1:27082394-27088248 REVERSE LENGTH=2267 Length=2267 Score = 3210 bits (1738), Expect = 0.0 Identities = 1972/2085 (95%), Gaps = 15/2085 (1%) Strand=Plus/Plus Query 1 AGCTTTCTTCATTTTCACATCTCTCTCTCTGttttttttttAACTCCGTTTAAATTTTCC 60 |||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct 1 AGCTTTCTCCATTTTCACCTCTCTCTCTCTGTGTTTTTTTTAACTCCGTTTAAATTTTCC 60 Query 61 GTCTGAATTTTACAAAGGAAGACCAATGTCAGGTTTTGACGGCGTTGAAAATCAAATGAA 120 |||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| Sbjct 61 GTCTGAATTTTACAAAGGAACACTAATGTCAGCTTTTGACGGCGTTGAAAATCAAATGAA 120 Query 121 CGGTCCAGATTCATCTCCTCGTCTCTCTCAAGATCCTCGTGAGACTCGCTC---ATTATC 177 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct 121 CGGTCCAGATTCATCTCCTCGTCTCTCTCAAGATCCTCGTGAGCCTCGCTCATTATTATC 180 Query 178 ATCTTCTTGTTTCCCAATCACCCTCAAGTTCGTCGATGTGTGTTACCGAGTCAAGATCAA 237 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 181 ATCTTCTTGTTTCCCAATCACCCTCAAGTTCGTTGATGTGTGTTACCGAGTCAAGATCCA 240 Query 238 TGGCATGAGTAGCGATTCTTGTAATTTCAAGAAATTTTTAGGACTAAAACATCAACCGTC 297 ||||||||||| ||||||||||||| |||||||| | |||||| ||||||| ||||||| Sbjct 241 TGGCATGAGTAACGATTCTTGTAATATCAAGAAACTATTAGGATTAAAACAAAAACCGTC 300 Query 298 CGATGAGACAAGATCAACGGAGGAGAGGACGATACTAAGCGGTGTCACCGGAATGATATC 357 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 301 CGATGAGACAAGATCGACGGAGGAGAGGACGATACTAAGCGGAGTCACCGGAATGATATC 360 Query 358 TCCGGGCGAGTTTATGGCCGTTCTTGGACCATCGGGAAGTGGTAAATCAACTCTACTTAA 417 || |||||||||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct 361 ACCCGGCGAGTTTATGGCCGTTCTTGGACCATCGGGAAGTGGCAAATCTACGCTACTAAA 420 Query 418 CGCAGTCGCAGGGAGACTCCATGGATCAAACCTTACCGGGAAAATACTCATAAACGACGG 477 ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct 421 CGCAGTCGCAGGGAGACTCCATGGATCAAACCTCACCGGAAAAATACTTATAAACGACGG 480 Query 478 TAAAATAACGAAACAAACATTAAAACGCACCGGATTTGTAGCACAAGACGATCTTCTTTA 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 TAAAATAACGAAACAAACATTAAAACGCACCGGATTTGTAGCACAAGACGATCTTCTTTA 540 Query 538 CCCTCACTTAACCGTACGTGAAACCTTAGTTTTCGTCGCCTTGCTTCGTCTTCCTCAGAG 597 |||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| Sbjct 541 CCCTCACTTAACCGTACGTGAAACCTTAGTTTTCGTGGCTTTGCTTCGTCTTCCTCGGAG 600 Query 598 TCTAACCAGAGACGATAAGA-TCAGAGCCGCTGAATCGGTTATATCGGAGCTTGGTTTAA 656 |||||| ||||||| ||| | ||||||||||||||||||||||||||||||| ||||||| Sbjct 601 TCTAACAAGAGACGTTAA-ACTCAGAGCCGCTGAATCGGTTATATCGGAGCTAGGTTTAA 659 Query 657 CGAAATGTGAGAACACAGTCGTTGGAAACACTTTCATTAGAGGGATCTCTGGTGGAGAAA 716 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 660 CGAAATGTGAGAACACAGTCGTTGGGAACACTTTCATTAGAGGTATCTCTGGTGGAGAAA 719 Query 717 GGAAACGAGTGAGTATTGCTCATGAATTGCTAATAAACCCGAGTCTTCTTG-TTCTTGAT 775 |||||||||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| Sbjct 720 GGAAACGAGTTAGTATAGCTCATGAATTGCTTATAAACCCGAGTCTT-TTGGTTCTTGAT 778 Query 776 GAGCCTACTTCGGGTCTTGATGCTACCGCGGCGCTCCGGTTGGTTCAGACTCTTGCGGGG 835 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 779 GAGCCTACTTCGGGTCTTGATGCTACGGCGGCGCTCCGGTTGGTTCAGACTCTTGCCGGG 838 Query 836 TTGGCTCATGGGAAAGGAAAGACGGTTGTTACGTCGATTCATCAGCCGTCGAGTCGTGTG 895 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 839 TTGGCTCATGGGAAAGGAAAAACGGTGGTTACGTCGATTCATCAGCCGTCGAGTCGTGTG 898 Query 896 TTTCAGATGTTTGATACTGTGCTTCTTTTGAGTGAAGGAAAGTGTTTGTTCGTCGGGAAA 955 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 899 TTTCAGATGTTTGATACGGTGCTTCTTTTGAGTGAAGGAAAGTGTTTGTTCGTCGGAAAA 958 Query 956 GGAAGAGACGCCATGGCTTACTTTGAGTCCGTCGGATTCTCGCCGGCGTTTCCTATGAAT 1015 |||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct 959 GGAAGAGACGCCATGGCTTACTTTGAATCCGTCGGATTTTCGCCGGCTTTTCCTATGAAT 1018 Query 1016 CCGGCTGATTTTCTTCTTGATCTTGCTAACGGAGTTTGTCAGACTGACGGTGTAACCGAA 1075 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1019 CCGGCTGATTTTCTTCTTGATCTTGCTAACGGAGTTTGTCAGACTGACGGTGTAACGGAA 1078 Query 1076 CGCGAAAAGCCAAACGTGAGACAAACGCTGGTCACGGCTTATGATACATTGCTAGCCCCA 1135 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1079 CGGGAAAAGCCAAACGTGAGACAAACGCTGGTCACGGCTTATGATACATTGCTAGCCCCA 1138 Query 1136 CAAGTCAAAACTTGCATCGAAGCGTCACAGTTTCCTCAAGAGAACGCGCGTTTTGTGAAA 1195 |||||||||||||| ||||||| |||||| ||||||||||| ||||||||||| |||||| Sbjct 1139 CAAGTCAAAACTTGTATCGAAGTGTCACATTTTCCTCAAGACAACGCGCGTTTCGTGAAA 1198 Query 1196 ACGCGAGTAAGCGGCGGTGGAATAACAACATGTATTACAACATGGTTTAGCCAACTCTGC 1255 |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1199 ACGCGAGTAAACGGCGGTGGAATAACAACATGTATTGCAACATGGTTTAGCCAACTCTGC 1258 Query 1256 ATTCTCCTCCACAGACTTTTAAAAGAACGGCGTCATGAATC-TTTCGACGCACTTCG-AG 1313 ||||||||||||||||||||||||||||||||||| ||||| ||| ||| |||||| | Sbjct 1259 ATTCTCCTCCACAGACTTTTAAAAGAACGGCGTCACGAATCCTTT-GACTTACTTCGCA- 1316 Query 1314 TTTTCCAAGTCATCGCGGCGTCGTTGCTTTGTGGTCTCATGTGGTGGCACTCTGATTATC 1373 ||||||||||| ||||||| ||| | |||||||||||||||||||||||||||||||||| Sbjct 1317 TTTTCCAAGTCGTCGCGGCTTCGATCCTTTGTGGTCTCATGTGGTGGCACTCTGATTATC 1376 Query 1374 GAGACATACATGACCGACTAGGCCTACTATTCTTCATATCCATCTTCTGGGGGGTGCTTC 1433 ||||| |||||||||||||||||||||| ||||||||||||||||| ||||| || |||| Sbjct 1377 GAGACGTACATGACCGACTAGGCCTACTCTTCTTCATATCCATCTTTTGGGGAGTACTTC 1436 Query 1434 CATCATTTAACGCGGTCTTCACGTTTCCGCAAGAACGTGCGATTTTCACTCGAGAGCGTG 1493 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 1437 CATCATTTAACGCGGTCTTCACGTTTCCGCAAGAACGTGCAATTTTCACTAGAGAGCGTG 1496 Query 1494 CGTCCGGTATGTACACACTCTCTTCTTACTTCATGGCCCATGTCCTCGGATCGCTCTCCA 1553 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1497 CGTCCGGTATGTACACACTCTCTTCTTACTTCATGGCCCATGTACTCGGATCGCTCTCCA 1556 Query 1554 TGGAGCTCGTTCTTCCGGC-TGCATTCTTGACGTTAACTTATTGGATGGTCGATCTACGC 1612 ||||||||||||||||||| | ||||||||||||| ||||||||||||||| |||||||| Sbjct 1557 TGGAGCTCGTTCTTCCGGCAT-CATTCTTGACGTTCACTTATTGGATGGTCTATCTACGC 1615 Query 1613 CCCGGTCTTGCCCCATTCCTCCTCACCCTCTCCGTGCTCTTACTATATGTTTTAGCGTCA 1672 ||||| | | ||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 1616 CCCGGGATAGTCCCATTCCTCCTCACCCTCTCCGTGCTTTTACTATACGTTTTAGCGTCA 1675 Query 1673 CAAGGACTTGGACTTGCCCTTGGTGCAGCGATCATGGACGCTAAAAAAGCGTCTACAATC 1732 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1676 CAAGGACTTGGACTTGCCCTTGGTGCAGCGATCATGGACGCTAAAAAAGCGTCTACAATC 1735 Query 1733 GTAACCGTGACAATGCTAGCGTTTGTCTTAACCGGTGGTTACTATGTCAACAAAGTGCCA 1792 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1736 GTGACCGTGACAATGCTAGCGTTTGTCTTAACCGGTGGTTACTACGTCAACAAAGTGCCA 1795 Query 1793 TCCGGAATGGTGTGGTTGAAATACGTCTCCACAACATTTTATTGTTACCGTCTTTTAGTG 1852 ||||||||||||||| |||||||||| ||||| || |||||||||||||||||||||||| Sbjct 1796 TCCGGAATGGTGTGGATGAAATACGTTTCCACGACGTTTTATTGTTACCGTCTTTTAGTG 1855 Query 1853 GCTG-TCCAATATGGGAGTGGGGAAGAGATATTGCGAATGCTTGGATGTGATTCGAAGGG 1911 || | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1856 GC-GATCCAATACGGGAGTGGGGAAGAGATATTGCGAATGCTTGGATGTGATTCAAAGGG 1914 Query 1912 TAAGCAAGGAGCGGGTGCGGCGACATCGGCTGGATGCCGGTTTGTGGAAGAGGAAGTGAT 1971 ||||||||||||| |||||||||||||||||||||| || |||||||| ||||||||||| Sbjct 1915 TAAGCAAGGAGCGAGTGCGGCGACATCGGCTGGATGTCGATTTGTGGAGGAGGAAGTGAT 1974 Query 1972 CGGAGATATTGGTCTATGGACGAGCGTTGGTGTTTTGTTTTTGATGTTTGTTGGGTATAG 2031 ||||||| |||| | ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1975 CGGAGATGTTGGGATGTGGACGAGCGTTGGTGTTTTGTTTTTGATGTTTTTTGGGTATAG 2034 Query 2032 AGTATTGGCATATCTAGCTTTGAGGCGTATTAAACATTAAATAAA 2076 |||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 2035 AGTATTGGCATATCTAGCTTTGAGACGTATCAAACATTAAATAAA 2079 Score = 215 bits (116), Expect = 2e-54 Identities = 134/142 (94%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 2068 TTAAATAAAAATGAGTGGGTAAAATTTAGTTTTTAGGGCTT-TAATTCGGAATATTAAGA 2126 |||||||||||||||||||| ||||||| ||||||||| || || ||||||||||||| | Sbjct 2101 TTAAATAAAAATGAGTGGGT-AAATTTAATTTTTAGGG-TTCTAGTTCGGAATATTAAAA 2158 Query 2127 CGTCGCTAATTGTAATTTTGCGGTTTAGCGACGGGTTCAGTTTTTAACATGTGAAAATGA 2186 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2159 CGTCGCTAATTGTAATTTTGCGATTTAGCGACGGGTTCAGTTTTTAACATGTGAAAATGA 2218 Query 2187 AAATGACAAGTATTTTTAGTTG 2208 |||||||||||||||||| ||| Sbjct 2219 AAATGACAAGTATTTTTAATTG 2240 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 109537589190 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5