BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476499 Length=648 Score E Sequences producing significant alignments: (Bits) Value AT1G73630.1 | Symbols: | EF hand calcium-binding protein famil... 758 0.0 > AT1G73630.1 | Symbols: | EF hand calcium-binding protein family | chr1:27684736-27685453 FORWARD LENGTH=718 Length=718 Score = 758 bits (410), Expect = 0.0 Identities = 473/503 (94%), Gaps = 6/503 (1%) Strand=Plus/Plus Query 1 AAAAATGGCAAACACAAATCCTGAATCCGCTAACAAATCCACAACACCATCAACGGATAT 60 |||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| Sbjct 9 AAAAATGGCAAACACAAATCTTGAATCCACCAACAAATCCACAACACCATCAACGGATAT 68 Query 61 GGAGCTAAAGAAAGTCTTCGACCAA-TTCGACT-CCAACGGCGACGGGAAAATCTCAGTT 118 ||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||||||| Sbjct 69 GGAGCTAAAGAAAGTCTTCGA-CAAGTTCGA-TGCCAACGGCGACGGGAAAATCTCAGTT 126 Query 119 TCAGAGCTCGGAAACGTTTTCAAATCCATGGGAACGTCGTACACAGAGGAGGAGCTAAAC 178 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 127 TCAGAACTCGGAAACGTTTTCAAATCCATGGGAACGTCGTACACTGAGGAGGAGCTAAAC 186 Query 179 CGTGTGTTAGACGAAATCGACATCGATC-GTGACGGTTTCATCAATCAGGAAGAGTTCGC 237 ||||| |||||||||||||||||||| | | ||||||||||||||||| |||||||| || Sbjct 187 CGTGTATTAGACGAAATCGACATCGA-CTGCGACGGTTTCATCAATCAAGAAGAGTTTGC 245 Query 238 TACCATTTGCCGATCATCTTCCTCCGCAGCAGAGATACGTGAAGCGTTCGATCTCTACGA 297 ||||||||| ||||||||||||||||| | |||||| ||||||||||||||||||||||| Sbjct 246 TACCATTTGTCGATCATCTTCCTCCGCTGTAGAGATCCGTGAAGCGTTCGATCTCTACGA 305 Query 298 TCAGAACAAAAACGGTTTGATTTCGTCCTCTGAGATCCATAAGGTTCTTAATCGTCTTGG 357 |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 306 TCAGAATAAAAACGGTTTGATTTCGTCCTCTGAGATCCATAAAGTTCTGAATCGTCTTGG 365 Query 358 TATGTCTTGCTCTGTTGAAGATTGTGTGAGAATGATCGGTCATGTTGATGCTGACGGCGA 417 |||| ||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| Sbjct 366 TATGACTTGCTCTGTTGAAGATTGTGTGAGAATGATTGGTCATGTTGATACTGATGGCGA 425 Query 418 TGGAAATGTTAATTTCGAGGAGTTTCAGAAGATGATGTCGTCGCCTGAGCTCGTTAAGGG 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 426 TGGAAATGTTAATTTCGAGGAGTTTCAGAAGATGATGTCGTCGCCTGAGCTCGTTAAGGG 485 Query 478 ATCCGTCGCGAACACTTAGGGTT 500 | |||| |||||| ||||| ||| Sbjct 486 AACCGTTGCGAACTCTTAGAGTT 508 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31295873581 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5