BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476506
Length=3871
Score E
Sequences producing significant alignments: (Bits) Value
AT1G73660.1 | Symbols: | protein tyrosine kinase family protei... 4841 0.0
AT1G18160.1 | Symbols: | Protein kinase superfamily protein | ... 1245 0.0
> AT1G73660.1 | Symbols: | protein tyrosine kinase family protein
| chr1:27691893-27697211 REVERSE LENGTH=3940
Length=3940
Score = 4841 bits (2621), Expect = 0.0
Identities = 2885/3009 (96%), Gaps = 32/3009 (1%)
Strand=Plus/Plus
Query 883 GGATTTAGGCTCCAAGGATCCAGCTGTTGAAGAAGAGAATCAGATACAGTTGGCTTTAGA 942
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 GGATTTAGGTTCCAAAGATCCAGCTGTTGAAGAAGAGAATCAGATACAGTTGGCTTTAGA 939
Query 943 GTTAAGTGCTAGAGAAGATCCTGAGGCTACTCAGATTGAGGCTATTAAGCAATTCAGTTT 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 940 GTTAAGTGCTAGAGAAGATCCTGAGGCTACTCAGATTGAGGCTATTAAGCAATTCAGTTT 999
Query 1003 AGGCTCTTGTGCTCCTGAGAACTCTCCAGCCGAACTCATCGCTTATCGGTACTGGAATTA 1062
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1000 AGGCTCTTGTGCTCCTGAGAACTCTCCAGCTGAACTCATCGCTTATCGCTACTGGAATTA 1059
Query 1063 CAATTGTCTTGGCTATGATGACAAGATCTTGGATGGTTTTTATGACTTGTATGGAGTGAT 1122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1060 CAATTGTCTTGGCTATGATGACAAGATCTTGGATGGTTTTTATGACTTGTATGGAGTGTT 1119
Query 1123 GAATGTATCCTCATCAGAAAGAATACCTCCTTTGCTCGATCTTCAAGGGACACCTGTTTC 1182
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1120 GAATGCATCCTCAGCAGAAAGAATACCTCCTTTGCTCGATCTTCAAGGGACACCTGTTTC 1179
Query 1183 AGACGGTGTGACATGGGAAGCTGTTCTTGTGAACAGAAGTGGGGATTCTAATCTGTTGAG 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1180 AGACGGTGTGACATGGGAAGCTGTTCTTGTGAACAGAAGTGGGGATTCTAATCTGTTGAG 1239
Query 1243 GCTTGAACAGATGGCTCTTGATATTGCTGCTAAATCAAGATCAGTTTCTTCCTCTGGTTT 1302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 ACTTGAACAGATGGCTCTTGATATTGCTGCTAAATCAAGATCAGTTTCTTCCTCTGGTTT 1299
Query 1303 TGTGAACAGTGAATTGGTAAGGAAACTGGCTATTTTGGTTGGAGATTACATGGGTGGACC 1362
|||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1300 TGTGAATAGTGAATTGGTAAGGAAACTGGCTATTTTAGTGGGAGATTACATGGGTGGACC 1359
Query 1363 AGTCGTGCACCCAGATAGTATGTTGAGAGCTTGGAGGAGTCTTAGCTACAGTTTGAAAGC 1422
||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1360 AGTCGTGCACCCAGAGAGCATGTTGAGAGCTTGGAGGAGTCTTAGCTATAGTTTGAAAGC 1419
Query 1423 AACTCTTGGAAGCATGGTTTTGCCACTTGGTTCTCTAACTATTGGTTTGGCTCGTCACCG 1482
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1420 AACTCTTGGAAGCATGGTTTTGCCACTTGGTTCTCTGACTATTGGTTTGGCTCGTCACCG 1479
Query 1483 GGCCTTGTTATTCAAAGTATTGTGTGATAGTGTTGGTGTTCCTTGTCGGATAGTCAAAGG 1542
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1480 AGCCTTGTTATTCAAAGTATTGTGTGATAGTGTTGGTGTTCCTTGTCGAATAGTCAAAGG 1539
Query 1543 ACAGCAATATACCGGTTCTGAAGATGTGGCAATGAACTTTATTAAGGCTGATGATGGCAG 1602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1540 TCAGCAATATACCGGTTCTGAAGATGTGGCAATGAACTTTATTAAGGCTGATGATGGCAG 1599
Query 1603 GGAGTACATTGTTGATCTCATGGGAGATCCCGGCACACTTATTCCAGCTGATGCAGCTGG 1662
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1600 GGAGTACATTGTTGATCTTATGGGAGATCCCGGCACGCTTATTCCAGCTGATGCAGCTGG 1659
Query 1663 ACTACAAATAGACTATGATGAATCTGCCTATTCCGCTAGTCCTGGAGACAATGTTTCATT 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1660 ACTACAAATAGACTATGATGAATCTGCCTATTCCGCTAGTCCTGGAGACAATGATTCAAT 1719
Query 1723 TCATGTAGCTTCTTCCAGCAATGGGATTGAGAGCTCATTTGAAGAGAATGCAGAGTTTCG 1782
|||||||||||||||||||||||| ||||| ||||||| |||||||||| ||||||||||
Sbjct 1720 TCATGTAGCTTCTTCCAGCAATGGTATTGAAAGCTCATATGAAGAGAATACAGAGTTTCG 1779
Query 1783 AACAGGGGAAGATCATTCTAGTACCAAGAGTTCTGGGGCGAGAAACCAATCCGGAGGTGA 1842
|||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1780 AACAGGGGAACATCGTTCTAGTACCAAGAGTTCTGGGGAGAGAAACCAATCCGGAGGTGG 1839
Query 1843 AGGCAATCTCATTGTTCATCCAAAGATTTCTAGGGAAGAAGTGAGAAATCAGAAGAATGT 1902
|||| ||||||||||||||||||| |||||||| ||||| |||| |||||||||||| ||
Sbjct 1840 AGGCGATCTCATTGTTCATCCAAATATTTCTAGAGAAGATGTGAAAAATCAGAAGAAAGT 1899
Query 1903 TGAAAAGGCTCCATTTCAAAATCTGTCTAGCAGGCCTATTCATTCTTTCACCCATATGAG 1962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1900 TGAAAAGGCTCCATTTCAAAATCTGTCTAGCAGGCCTATTCATTCTTTCACCCATATGAG 1959
Query 1963 ATCACCTTCTTGGACTGAAGGGGTTAGCTCCCCAGCTGCACAGAGGATGAAAGTCAAAGA 2022
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1960 ATCACCTTCTTGGACTGAAGGGGTTAGCTCCCCAGCTGCACAAAGGATGAAAGTCAAAGA 2019
Query 2023 TGTTTCACAATATATGATTGATGCTGCCAAAGAGAATCCACGGTTAGCTCAGAAGCTTCA 2082
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2020 TGTTTCACAATATATGATTGATGCTGCTAAAGAGAATCCACGGTTAGCTCAGAAGCTTCA 2079
Query 2083 TGATGTATTACTTGAAAGCGGAGTTGTAGCTCCTCCCAGTTTATTTTCCGAAGTTTATCC 2142
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 2080 TGATGTATTACTTGAAAGCGGAGTTGTAGCTCCTCCCAATTTATTTTCCGAAGTCTATCC 2139
Query 2143 CCAGCAATTGGAGGCAACTGTTGAAAGCAAAAACTCGACTGAAGCCAAGAAAGAGAAAGG 2202
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2140 CCAGCAATTGGAGGCAACTGTTGAAAGCAAAAACTCGACTGAAGCCAAGAAAGAGAGAGG 2199
Query 2203 AAAAGATTTAGAGACAGCTCAGGAAGGAAGACACCAAAACGGTTTTGGTCCAGTGAGGTT 2262
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2200 AAAAGATTTAGAGACAACTCAGGAAGGAAGACACCAAAACGGTTTTGGTCCAGTGAGGTT 2259
Query 2263 TTTGCCTCCATTACCAAGAGTACGCTCTAAAACAAATGCACATGATCAACGTGATAATGG 2322
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 2260 TTTGCCTCCATTACCAAGAGTGCAATCTAAAACAAATGCACATGATCAACGTGATAATGG 2319
Query 2323 CAAAGTTGTAAGTCAGTCTGATTCTTCACATTCTGAAGCATCTTCGACAGAATATGCCAG 2382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2320 CAAAGTTGTAAGTCAGTCTGATTCTTCACATTCTGAAGCATCTTCGACAGAATATGCCAG 2379
Query 2383 AACCGTTCctgctgctgtagctgcagctgctgttgttgcatcttcaatggttgctgctgc 2442
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2380 AACCGTCCCTGCTGCTGTAGCTGCAGCTGCTGTTGTTGCATCTTCCATGGTTGCTGCTGC 2439
Query 2443 tgctgccaagtctgctAACTCAGACTCCTCCCCCGTAGAACTTCCTGCGGCCA-CTGCTG 2501
||||||||||||||| |||||||||||||||||| ||||||||||||| || | ||||||
Sbjct 2440 TGCTGCCAAGTCTGCAAACTCAGACTCCTCCCCCATAGAACTTCCTGCTGC-AGCTGCTG 2498
Query 2502 CCACGGCCACTGCTGCTGCAGTTGTGGCAACAGCTGCGGCCGTGTCCAGGCAACTTGAAT 2561
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2499 CCACGGCCACTGCTGCTGCAGTTGTGGCAACAGCTGCAGCCGTGTCCAGGCAACTTGAAT 2558
Query 2562 TAGGCTCGAATAGCGACGGGGATGCTGGTTCTGGTGGGCATGATCCTCAAGGTAGTGGGG 2621
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 2559 TAGGCTCGAATAGCGACGGGGATGATGGTTCTGGTGGGCATGAGCCTCAAGGTAGTGGGG 2618
Query 2622 ACTCTAATCATGGGCCAAATTCAGGAGGGGAAAGAATATCTGACAGATCTATTGACAACG 2681
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
Sbjct 2619 ACTCTAATCATGGGCCAAATTCAGGAGGGGAAAGAATATCTGACAAATCTATTGGCAATG 2678
Query 2682 AAAGTTCCAAGTCTGACTGTGATGATGTATCTGACTGTGAGATTTTGTGGGAAGAAATTA 2741
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2679 AAAGTTCTAAGTCAGACTGTGATGATGTATCTGACTGTGAGATTTTGTGGGAAGAAATTA 2738
Query 2742 CTTTGGGAGAACGTATTGGACTCGGATCTTATGGAGAAGTGTATCGGGGAGATTGGCACG 2801
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2739 CTGTGGGAGAACGTATTGGACTTGGATCTTATGGAGAAGTGTATCGGGGAGATTGGCACG 2798
Query 2802 GGACTGAAGTGGCTGTCAAGAAGTTCCTTGATCAAGATTTAACAGGAGAAGCATTGGAGG 2861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2799 GGACTGAAGTGGCTGTCAAGAAGTTCCTTGATCAAGATTTAACAGGAGAAGCATTGGAGG 2858
Query 2862 AATTCAGAAGTGAGGTCCGAATCATGAAAAAGGTTAGACACCCCAACATTGTTCTCTTCA 2921
|||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 2859 AATTCAGAAGTGAGGTCCGAATCATGAAAAAGCTAAGACATCCCAACATTGTTCTCTTCA 2918
Query 2922 TGGGAGCTGTGACTCGTCCACCGAATCTCTCAATTGTTACAGAGTTTCTTCCTAGAGGTA 2981
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2919 TGGGAGCTGTGACTCGCCCACCGAATCTTTCAATTGTTACAGAGTTTCTTCCTAGAGGTA 2978
Query 2982 GCTTGTATAGGTTAATCCACCGGCCAAATAACCAATTAGACGAGAGGAGGCGTCTAAGAA 3041
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 2979 GCTTGTATAGGTTAATCCACCGGCCAAATAACCAATTAGACGAGAGGAGGCGCCTGAGAA 3038
Query 3042 TGGCTCTTGATGCTGCTCGTGGAATGAACTATTTGCACAGCTGTAATCCGATGATTGTCC 3101
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3039 TGGCCCTTGATGCTGCTCGTGGAATGAACTATTTGCACAGCTGTAATCCGATGATTGTCC 3098
Query 3102 ATCGCGATCTAAAGTCCCCAAACCTTCTAGTTGACAAAAATTGGGTCGTGAAGGTGTGTG 3161
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3099 ATCGCGATCTTAAGTCCCCAAACCTTCTAGTTGACAAAAACTGGGTCGTGAAGGTGTGTG 3158
Query 3162 ATTTTGGGTTGTCTAGAATGAAACACAGTACATACCTCTCTTCAAAGTCAACAGCAGGCA 3221
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3159 ATTTTGGATTGTCTAGGATGAAACACAGTACATACCTCTCTTCAAAGTCAACAGCAGGGA 3218
Query 3222 CGGCTGAATGGATGGCTCCAGAAGTGCTTAGAAACGAACCTGCTGATGAGAAGTGCGATG 3281
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3219 CGGCTGAATGGATGGCTCCAGAAGTGCTAAGAAACGAACCTGCTGATGAGAAGTGCGATG 3278
Query 3282 TTTACAGCTATGGTGTGATTCT-ATGGGAACTCTTTACGTTACAGCAACCATGGGGAAAG 3340
|||||||||| |||||||| || ||||||||||||||||||||| ||||| |||||||||
Sbjct 3279 TTTACAGCTACGGTGTGAT-CTTATGGGAACTCTTTACGTTACAACAACCGTGGGGAAAG 3337
Query 3341 ATGAACCCGATGCAAGTTGTTGGGGCAGTTGGGTTTCAGCATCGACGTCTTGACATTCCC 3400
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3338 ATGAACCCGATGCAAGTAGTTGGGGCAGTTGGGTTTCAGCATCGACGTCTTGACATTCCC 3397
Query 3401 GACTTTGTCGATCCAGCAATTGCAGATCTCATCAGTAAATGCTGGCAGACGGATTCAAAG 3460
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3398 GACTTTGTAGATCCAGCAATTGCAGATCTCATCAGTAAATGCTGGCAGACGGATTCAAAG 3457
Query 3461 TTAAGGCCAAGTTTTGCAGAGATAATGGCTTCTCTAAAGCGGCTACAGAAACCTGTAACA 3520
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3458 TTAAGGCCAAGTTTTGCAGAGATAATGGCGTCTCTAAAGCGGCTACAGAAACCTGTAACA 3517
Query 3521 GGTTCCAACATCCCAAGACCAGTCCCCAGTTCCTCTTCATTACCAACTGAACATGAACAA 3580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3518 GGTTCCAACATCCCAAGACCAGTCCCCAGTTCCTCTTCATTACCAACTGAACATGAACAA 3577
Query 3581 AAGGATTGATAACAAAAGAAGAAGGAGACCAAAGTGGCAAACACATTTTTGATGGATTCA 3640
|||||||||||||| ||||||| | | |||||||||||||||||||||||| | |||||
Sbjct 3578 AAGGATTGATAACAGAAGAAGACG-A--CCAAAGTGGCAAACACATTTTTGACGAATTCA 3634
Query 3641 ATCTGTTTGAAGGAAGaaaaaaaaGCAACAAATGTTCCATCTCTGCTACTTTTTGGCTCA 3700
||||||||||||||| |||||| || ||||||||||| |||||||||||||||| ||||
Sbjct 3635 ATCTGTTTGAAGGAA-AAAAAA--GCTACAAATGTTCCTTCTCTGCTACTTTTTGCCTCA 3691
Query 3701 GCTTCAGTGTTTCACACAGCTTGTGAATTGTGATTAAAAGAAC-ATTCATGGAAGATGAC 3759
|||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 3692 GCTTCAGTGTTTGACACAGCTTGTGAATTGTGA--AAAAGAAAGATTCATGGAAGATGAC 3749
Query 3760 GATTGAAGAAGGTGAAGGATTGTGCTCGT-T-T---GTT-T-T--G-TTG-------TGT 3802
||||||||||||||||||||||||||||| | | ||| | | | ||| |||
Sbjct 3750 GATTGAAGAAGGTGAAGGATTGTGCTCGTGTGTTTTGTTGTCTTTGCTTGCAAGCGATGT 3809
Query 3803 TCATGTTCATGCGTAAAATATCCTCTGTTTTGTTTTCCAAAATTGAAACTGTACAAAGAG 3862
|||||||||||||||| | |||||| ||||||||||||| |||||||||||||||||||
Sbjct 3810 TCATGTTCATGCGTAAT-T-TCCTCTATTTTGTTTTCCAATATTGAAACTGTACAAAGAG 3867
Query 3863 AGAAAGAAA 3871
|||||||||
Sbjct 3868 AGAAAGAAA 3876
Score = 1051 bits (569), Expect = 0.0
Identities = 760/842 (90%), Gaps = 53/842 (6%)
Strand=Plus/Plus
Query 1 tttttttttgttttgttttattttGCATGTCACAGTAAGTAACTCTCCTCCTCAATTCTC 60
|||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 13 TTTTTTCTTGTTCTGTTTTGTTTTGCATGTCACAGTAAGTAACTCTCCTCCTCAATTATC 72
Query 61 AAAAATCCAAACTTTAA-TTTCTTCTAGAGAAGAGCCACTCTCTCCACTTCTTTCTTTGT 119
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 73 AAAAATGCAAACTTTAATTTTCTTCTAGAGAAGAGCCACTCTCTCCACTTCTTTCTTTGT 132
Query 120 CCAACTTTTATAGACAGATAAAAGTGGCGT-----A-AG--AGAGAG----ATA--CAAG 165
||||||||| |||||||| |||||||||| | || |||||| ||| ||||
Sbjct 133 CCAACTTTT-TAGACAGA-GAAAGTGGCGTCAGAGATAGATAGAGAGATACATATTCAAG 190
Query 166 TT-GTTGAAGGAGGAGAATTAGCGGTTCATATCAGTACGGAG-AAATTGTCAGTCATATG 223
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 191 TTGGTTGAAGGAGGAGAATTAGCGGTTCATATCAGTACGGAGAAAATTGTCAGTCATATG 250
Query 224 CTTTTTTCTCTTTAAATTCTGCATTTGAGTGGGTGTGTGCTTTTAACCATTCTCGTGATT 283
||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 251 CTTTTTT-TCTTTAAATTCTGCATTTGAGTGGGTGTGTGCTTTTAACCATTTTGGTGATT 309
Query 284 TATC-----AGaaaaaaaaa--------------aGCTCATTCTCTCTGCAAATTTTGCT 324
|||| | ||||||||| |||||| |||||| |||||||||||
Sbjct 310 TATCAAAAAAAAAAAAAAAATTCTGTGTGTTTTGAGCTCAAGCTCTCTACAAATTTTGCT 369
Query 325 GTTTCAAGTTTTTGCCTTTTGAAGTCCAGATAAAGTTGAAATCTTTGTTCtttttttAAT 384
|| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||
Sbjct 370 GTCTCAAGTTTTTGCCTTTTGAAGTCCA-ATAAAGTTGAAATCTTTGTTC--TTTTTGAT 426
Query 385 TGGTCTTCGTGAATTCCGGTGAAAGTTTCAAAC-TTTAAATCAAATTCCGGGGGAGAAAT 443
||||||||||||||||||||||||||||||||| ||| | | ||||||| |||||| |||
Sbjct 427 TGGTCTTCGTGAATTCCGGTGAAAGTTTCAAACTTTTGATTTAAATTCC-GGGGAGGAAT 485
Query 444 TAGGGTTTATGAAAGTAAAAGAAGAAACTTTGAAGAATTTGGGAGATGGAGTGGTTTTAA 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 486 TAGGGTTTATGAAAGTAAAAGAAGAAACTTTGAAGAATTTGGGAGATGGAGTGGTTTTAA 545
Query 504 GACCAGTTGATGATTGTTCTAGCATTTGGAGTATGAAGATGAACATGAAGAACTTTCTTA 563
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 546 GACCTGTTGATCATTGTTCTAGCATTTGGAGTATGAAGATGAACATGAAGAACTTTCTTA 605
Query 564 AGAAACTTCATATCACGCCGAATCAATCAGATGAAGCTGAAGGATCAGTTTCAACAACAA 623
|||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 606 AGAAACTTCATATCTCGCCCAATCAATCAGATGAAGCTGAAGGATCAATTTCAACAAC-- 663
Query 624 CGACTACTAGGAGCAATCATCATAAGTCTATCGATGTATCATCATCATCATCACCAAGGT 683
|| || |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 664 ----TA--AG-AGCAATCATCATAAGTCTATCGATGTATCATCATCATCATCACCGAGGT 716
Query 684 CTCATCACAGCAATAGCCCTGAAATCAAACCTTTTTCTGGTTTATCGAATTGGTTAAGCT 743
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 717 CTCATCACAGCAATAGCCCTGAAATCAAACCTTTTTCTGGTTTATCTAATTGGTTAAGTT 776
Query 744 CTGTTAGTCATAGAAAAAGCCCTAGTCCACCTAATTCTTTCAATGCCAAGAACAGAGCCG 803
||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 777 CTGTTGGTCATAGAAAAATCCCTAGTCCTCCTAATTCTTTCAATGCCAAGAACAGAGCCG 836
Query 804 CC 805
||
Sbjct 837 CC 838
> AT1G18160.1 | Symbols: | Protein kinase superfamily protein
| chr1:6248793-6254039 FORWARD LENGTH=3516
Length=3516
Score = 1245 bits (674), Expect = 0.0
Identities = 1201/1449 (83%), Gaps = 62/1449 (4%)
Strand=Plus/Plus
Query 893 TCCAAGGATCCAGCTGTTGAAGAAGAGA-ATCAGATACAGTTGGCTTTAGAGTTAAGTGC 951
||||||||||||| ||||||||||| | ||||||||||||||||| |||||||||||||
Sbjct 652 TCCAAGGATCCAGAAGTTGAAGAAGA-ATATCAGATACAGTTGGCTCTAGAGTTAAGTGC 710
Query 952 TAGAGAAGATCCTGAGGCTACTCAGATTGAGGCTATTAAGCAATTCAGTTTAGG----C- 1006
||| || |||||||| ||| |||||||||||||||| ||||| ||||| ||||| |
Sbjct 711 TAGGGAGGATCCTGAAGCTGCTCAGATTGAGGCTATGAAGCAGTTCAGCTTAGGTTCTCG 770
Query 1007 T-CTTGTGCTCCTGAGAACT-CTCCAGCCGAACTCATCGCTTATCGGTACTGGAATTACA 1064
| ||| |||||| ||||| | ||||||| |||||||| || ||| | || |||||||| |
Sbjct 771 TCCTTCTGCTCCCGAGAA-TACTCCAGCTGAACTCATGGCATATAGATATTGGAATTATA 829
Query 1065 ATTGTCTTGGCTATGATGACAAGATCT-TGGATGGTTTTTATGACTTGTATGGAGTGATG 1123
| ||||||||||||||||||||||| | |||||||||| |||||| ||| |||||| |||
Sbjct 830 ACTGTCTTGGCTATGATGACAAGAT-TGTGGATGGTTTCTATGACCTGTGTGGAGTAATG 888
Query 1124 AATGTATCCTCATCAGAAAGAATACCT-CCTTTGCTCGATCTTCAAGGGACACCTGTTTC 1182
|||| ||| || | | ||||||||||| |||| | | |||||||| ||||||| ||| ||
Sbjct 889 AATGAATCTTCCTTAAAAAGAATACCTCCCTTAG-TTGATCTTCAGGGGACACTTGTGTC 947
Query 1183 AGACGGTGTGACATGGGAAGCTGTTCTTGTGAACAGAAGTGGGGATTCTAATCTGTTGAG 1242
||| ||||| || ||||| |||||||| |||||||| || |||||||||||||||||
Sbjct 948 AGATGGTGTAACTTGGGATGCTGTTCTAGTGAACAGCAGCAAAGATTCTAATCTGTTGAG 1007
Query 1243 GCTTGAACAGATGGCTCTTGATATTGCTGCTAAATC-AAGATCAGTTTCTTCCTCTGGTT 1301
|||||||| ||||||||||||||||| || ||||| ||| |||| ||||| || || |
Sbjct 1008 ACTTGAACAAATGGCTCTTGATATTGCAGCAAAATCAAAG-TCAGCGTCTTCTTCAGGGT 1066
Query 1302 TTGTGAACAGTGAATTGGTAAGGAAACTGGCTA-TTTTGGTTGGAGATTACATGGGTGGA 1360
||||||||||||||||||||||| ||||||| | |||| |||| |||||||||||||||
Sbjct 1067 TTGTGAACAGTGAATTGGTAAGGCAACTGGC-AGTTTTAGTTGCTGATTACATGGGTGGA 1125
Query 1361 CCAGTCGTGCACCCAGATAGTATGTTGAGAGCTTGGAGGAGTCTTAGCTACAGTTTGAAA 1420
||||| || | |||||||| | ||| ||||||||| ||||||| |||||||| ||||||
Sbjct 1126 CCAGTTTTGGATCCAGATAGCACGTTAAGAGCTTGGTGGAGTCTGAGCTACAGCTTGAAA 1185
Query 1421 GCAACTCTTGGAAGCATGGTTTTGCCACTTGGTTCTCTAACTATTGGTTTGGCTCGTCAC 1480
||||| || | ||||||||| |||| || ||||||||||||||||| |||||||||||
Sbjct 1186 GCAACCCTCCGTAGCATGGTTCTGCCCCTGGGTTCTCTAACTATTGGATTGGCTCGTCAT 1245
Query 1481 CGGGCCTTGTTATTCAAAGTATTGTGTGATAGTGTTGGTGTTCCTTGTCGGATAGTCAAA 1540
|| ||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||
Sbjct 1246 CGTGCCTTGTTATTCAAAGTTTTGTGTGATAGTGTCGGCGTTCCTTGTCGAATAGTCAAA 1305
Query 1541 GGACAGCAATATACCGGTTCTGAAGATGTGGCAATGAACTTTATTAAGGCTGATGATGGC 1600
|||||||||||||||||||| || |||||||||||||||| |||||| |||||||||||
Sbjct 1306 GGACAGCAATATACCGGTTCAGATGATGTGGCAATGAACTCCATTAAGACTGATGATGGC 1365
Query 1601 AGGGAGTACATTGTTGATCTCATGGGAGATCCCGGCACACTTATTCCAGCTGATGCAGCT 1660
|||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||
Sbjct 1366 AGGGAGTACATTGTTGATCTCATGGGAGATCCAGGCACGCTTATCCCCGCTGATGCAGCT 1425
Query 1661 GGACTACAAATAGACTATGATGAATCTGCCTATTCCGCTAGTCCTGGAGACAATGTTTCA 1720
||||||||||| |||| |||||| |||| ||| || || ||||| |||| || ||||
Sbjct 1426 GGACTACAAATGGACTTTGATGATTCTGTCTACTCTGCCAGTCCCAGAGATGTTGATTCA 1485
Query 1721 TTTCATGTAGCTTCTTCCAGCAATGGGATTGAGAGCTCATTTGAAGAGA-ATGCAGAGT- 1778
| |||||||||||||||||||| |||| | ||||||||| ||||||| | | |||| |
Sbjct 1486 TCTCATGTAGCTTCTTCCAGCAGTGGGGTCGAGAGCTCAATTGAAGA-ACACACAGAATC 1544
Query 1779 TTCGAACAGGGGAAGATCATTCTAGTACCAAGAGTTCTGGGGCGAGAAA-CCAATCCGGA 1837
|| | ||| |||| ||| |||||| |||||| |||| ||| | |||| |||||| | |
Sbjct 1545 TTGGT-CAGCGGAACATCGTTCTAGGACCAAGGGTTCCCGGGAG-GAAAACCAATCTGCA 1602
Query 1838 GGTGAAGGCAATCTCATTGTTCATCCAAAGATTTCTAGGGAAGAAGTGAGAAATCAGAAG 1897
|||| ||| ||||||| | | |||||| ||| ||||||| ||| | ||||
Sbjct 1603 GGTGGAGGGGATCTCAT-GAT--TCCAAATATT---AGGGAAGCTGTG-G------GAAG 1649
Query 1898 AATGTTGAAAAGGCTCCAT-TTCAAAATCTGTCTAGCAGGCCTATTCATTCTTTCACCCA 1956
| |||||||||| | ||||| |||| || |||| ||||| |||||||||||| ||
Sbjct 1650 --TC---AAAAGGCTCC-TGTTCAACATCTTTCCAGCAAGCCTACTCATTCTTTCACTCA 1703
Query 1957 TATGAGATCACCTTCTTGGACTGAAGGGGTTAGCTCCCCAGCTGCACAG-AGGATGAAAG 2015
| ||||||||||| ||||||||||| |||||||| ||||||| || | ||||||||||
Sbjct 1704 TGCCAGATCACCTTCGTGGACTGAAGGTGTTAGCTCTCCAGCTGGAC-GCAGGATGAAAG 1762
Query 2016 TCAAAGATGTTTCACAATATATGATTGATGCTGCCAAAGAGAATCCACGGTTAGCTCAGA 2075
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1763 TCAAAGATGTTTCACAATATATGATTGATGCTGCCAAAGAGAATCCACAACTAGCTCAGA 1822
Query 2076 AGCTTCATGATGTATTACTTGAAAGCGGAGTTGTAGCTCCTCCCAGTTTATTTTCCGAAG 2135
||||||||||||| ||||||||||| |||||||||||||||| | ||||||||| ||||
Sbjct 1823 AGCTTCATGATGTGTTACTTGAAAGTGGAGTTGTAGCTCCTCGAAATTTATTTTCGGAAG 1882
Query 2136 TTTATCCCCAG-CAATTGGAGGCAACTGTTGAAAGCAAAAACTC-GACTGAAGCCAA-GA 2192
| ||| | || |||| ||||||||| | ||||| |||| || | ||||| |||| ||
Sbjct 1883 TCTATTCAGAGTCAAT-GGAGGCAACAGGTGAAATCAAAT-CTGTGGCTGAATCCAATGA 1940
Query 2193 AAGAGAAAGGAAAAGATTTAGAGA-CAGCTC-AGGAAGGAAGACACCAAAACGGTTTTGG 2250
|||||||| |||||||| | || || || || |||||||| |||| | | ||||
Sbjct 1941 T-GAGAAAGGGAAAGATTTTG-GAACAA-TCCAGCAAGGAAGAAACCAGAGCAACCTTGG 1997
Query 2251 TCCAGTGAGGTTTTTGCCTCCA-TTACCAAGAGTACGC--TCTAAAACAAATGCACATGA 2307
|| ||||||||||||||||| || |||||| ||| |||||| ||| | | |||||
Sbjct 1998 CCCTGTGAGGTTTTTGCCTCCTCTT-CCAAGAC--CGCAATCTAAAGCAATTACCCATGA 2054
Query 2308 TCAACGTGA 2316
| ||||||
Sbjct 2055 CCTACGTGA 2063
Score = 1051 bits (569), Expect = 0.0
Identities = 996/1193 (83%), Gaps = 66/1193 (6%)
Strand=Plus/Plus
Query 2334 GTCAGTCTGATTCTTCACATTCTGAAGCATCTTCGACAGAATATGCCAGAACCGTTCctg 2393
|||| |||||||| |||||||||||| |||| | || || ||| |||||| |||||||
Sbjct 2114 GTCACTCTGATTCCTCACATTCTGAAACATC-T--ACTGACTATCCCAGAAATGTTCCTG 2170
Query 2394 ctgctgtagctgcagctgctgttgttgcatcttcaatggttgctgctgctgctgccaagt 2453
||| ||||||||||| ||||||||||| ||||| ||||||| | |||||| |||||||
Sbjct 2171 TTGCCGTAGCTGCAGCGGCTGTTGTTGCGTCTTCCATGGTTG-T--TGCTGCCGCCAAGT 2227
Query 2454 ctgctAACTCAGACTCCTCCCCCGTAGAACTTCCTGCGGCCACTGCTGCCACGGCCACTG 2513
| || ||||| || |||||| | |||||||| | |||||| || | |||
Sbjct 2228 CAGCAAACTCGGATTCCTCCACTTTAGAACTT--T-------CTGCTG-CA--G---CTG 2272
Query 2514 CTGCTGCAGTTGTGGCAACAGCTGCGGCCGTGTCCAGGCAACTTGAATTAGGCTCGA-AT 2572
||||||||||| |||| |||||||| || ||| |||||| ||||| ||| || | |
Sbjct 2273 CTGCTGCAGTTATGGCGACAGCTGCAGCAGTGAGCAGGCAGTTTGAACTAGATTC-ACTT 2331
Query 2573 AGCGACGGGGATGCTGGTTCTGGTGGGCATGATCCTCAAGGTAGTGGGGACTCTAATCAT 2632
||| ||||||| | | | | || | | || | || ||| || ||||
Sbjct 2332 AGCAACGGGGA---T-G--C---T-GG--T--T-CT----G--GT-GGG---CT--TCAT 2364
Query 2633 GGGCCAAATTCAGGAGGGGAAAGAATATCTGACAGATCTATTGACAACGAAAGTTCCAAG 2692
||| | |||||||||| ||| ||||||| ||||||||||||| ||| |||||||| ||
Sbjct 2365 GGGGTAGATTCAGGAGGAGAACGAATATCCGACAGATCTATTGGCAATGAAAGTTCAAAA 2424
Query 2693 TCTGA--CTG----TGATGATGTATCTGACTGTGAGATTTTGTGGGAAGAAATTACTTTG 2746
||||| ||| |||||||||| |||| || |||||||||||||| ||||||||| ||
Sbjct 2425 TCTGATGCTGCAATTGATGATGTAGCTGAATGCGAGATTTTGTGGGAGGAAATTACTGTG 2484
Query 2747 GGAGAACGTATTGGACTCGGATCTTATGGAGAAGTGTATCGGGGAGATTGGCACGGGACT 2806
| || ||||| ||||| ||||| || ||||| || ||| ||||||||||||| || |||
Sbjct 2485 GCTGAGCGTATCGGACTGGGATCATACGGAGAGGTATATAGGGGAGATTGGCATGGAACT 2544
Query 2807 GAAGTGGCTGTCAAGAAGTTCCTTGATCAAGAT-TTAACAGGAGAAGCATTGGAGGAATT 2865
| ||||||||||||||||||| |||| |||||| || || ||||| ||| ||||||||||
Sbjct 2545 GCAGTGGCTGTCAAGAAGTTCATTGACCAAGATATT-ACTGGAGAGGCACTGGAGGAATT 2603
Query 2866 CAGAAGTGAGGTCCGAATCATGAAAAAGG-TTAGACACCCCAACATTGTTCTCTTCATGG 2924
||||||||||||||| || ||| | |||| | |||||||| || ||||||||||||||||
Sbjct 2604 CAGAAGTGAGGTCCGGATGATG-AGAAGGCTCAGACACCCTAATATTGTTCTCTTCATGG 2662
Query 2925 GAGCTGTGACTCGTCCACCGAATCTCTCAATTGTTACAGAGTTTCTTCCTAGAGGTAGCT 2984
||||||| || || ||||| |||||||||||||||||||| ||||||||| |||||||||
Sbjct 2663 GAGCTGTAACCCGCCCACCAAATCTCTCAATTGTTACAGAATTTCTTCCTCGAGGTAGCT 2722
Query 2985 TGTATAGGTTAATCCACCGGCCAAATAACCAATTAGACGAGAGGAGGCGTCTAAGAATGG 3044
||||||||||||| ||| |||| |||||||||||||| ||| | | |||||| || ||||
Sbjct 2723 TGTATAGGTTAATTCACAGGCCTAATAACCAATTAGATGAGCGAAAGCGTCTGAGGATGG 2782
Query 3045 CTCTTGATGCTGCTCGTGGAATGAACTATTTGCACAGCTGTAATCCGATGATTGTCCATC 3104
||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||
Sbjct 2783 CTCTTGATGCTGCTCGTGGAATGAATTATTTACACAGCTGTAATCCGGTAATTGTCCATC 2842
Query 3105 GCGATC-TAAAGTCCCCAAACCTTCTAGTTGACAAAAATTGGGTCGTGAAGGTGTGTGAT 3163
| |||| |||| || ||||||||||||||||||||||||||||| || |||||||| |||
Sbjct 2843 GTGATCTTAAA-TCTCCAAACCTTCTAGTTGACAAAAATTGGGTTGTCAAGGTGTGCGAT 2901
Query 3164 TTTGGGTTGTCTAGAATGAAA-CACAGTACATACCTCTCTTCAAAGTCAACAGCAGGCAC 3222
||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||
Sbjct 2902 TTTGGGTTGTCTAGAATGAAAGTA-AGCACATACCTCTCTTCAAAGTCAACAGCAGGCAC 2960
Query 3223 GGCTGAATGGATGGCTCCAGAAGTGCTTAGAAACGAACCTGCTGATGAGAAGTGCGATGT 3282
||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct 2961 GGCTGAATGGATGGCTCCAGAAGTGCTTAGAAACGAACCCGCAGATGAGAAGTGTGATGT 3020
Query 3283 TTACAGCTATGGTGTGATTCTATGGGAACTCTTTACGTTACAGCAACCATGGGGAAAGAT 3342
|||||||| || || ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 3021 GTACAGCTACGGGGTCATTCTCTGGGAACTCTTTACGTTACAGCAACCATGGGGAAAAAT 3080
Query 3343 GAACCCGATGCAAGTTGTTGGGGCAGTTGGGTTTCAGCATCGACGTCTTGACATTCCC-G 3401
|||||| |||||||| ||||| || ||||| ||||| |||||||| ||||| || ||| |
Sbjct 3081 GAACCCAATGCAAGTGGTTGGCGCGGTTGGTTTTCAACATCGACGACTTGATAT-CCCTG 3139
Query 3402 ACTTTGTCGATCCAGCAATTGCAGATCTCATCAGTAAATGCTGGCAGACGGATTCAAAGT 3461
| ||||| ||||| | |||||||||| ||||||| ||||| |||||||||||| ||| ||
Sbjct 3140 AATTTGTGGATCCTGGAATTGCAGATATCATCAGGAAATGTTGGCAGACGGATCCAAGGT 3199
Query 3462 TAAGGCCAAGTTTTGCAGAGATAATGGCTTCTCTAAAGCGGCTACAGAAACCT 3514
|||| |||||||||| |||||| |||| |||| |||||| |||||||||||||
Sbjct 3200 TAAGACCAAGTTTTGGAGAGATCATGGATTCTTTAAAGCAGCTACAGAAACCT 3252
Score = 100 bits (54), Expect = 9e-20
Identities = 87/102 (85%), Gaps = 5/102 (5%)
Strand=Plus/Plus
Query 521 TCTAGCATTTGGAGTATGAAGATGAACATGAAGAACTTTCTTAAGAAA-CTTCATATCAC 579
|||| |||||||||||||||||||||||||||||| ||||| || ||| |||| ||||||
Sbjct 319 TCTAACATTTGGAGTATGAAGATGAACATGAAGAAATTTCTCAA-AAAGCTTCGTATCAC 377
Query 580 GCCGAATCAATC-AGATGAAGCTGAAGGATCAGTTTC-AACA 619
||| |||||| | ||| || | |||||| ||||| || ||||
Sbjct 378 GCCCAATCAA-CGAGACGATGGTGAAGGTTCAGTCTCTAACA 418
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 192841728892
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5