BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476523 Length=1281 Score E Sequences producing significant alignments: (Bits) Value AT1G73870.1 | Symbols: | B-box type zinc finger protein with C... 1731 0.0 > AT1G73870.1 | Symbols: | B-box type zinc finger protein with CCT domain | chr1:27779166-27780676 FORWARD LENGTH=1381 Length=1381 Score = 1731 bits (937), Expect = 0.0 Identities = 1176/1289 (91%), Gaps = 25/1289 (2%) Strand=Plus/Plus Query 6 ATGGTGGTCGATGTGGAGAGCCGAGCCGTGAGCGTGCCGGGAGGGAAGATGGTGGCGCGT 65 |||||||||||||| ||||||||| ||| ||||||| | |||| |||||||| ||||||| Sbjct 49 ATGGTGGTCGATGTAGAGAGCCGAACCGCGAGCGTGACAGGAGAGAAGATGGCGGCGCGT 108 Query 66 GCCTGCGATGCGTGCATGGAGAGATCACGTGCTAGTTGGTACTGTCCAGCCGAAGACGCT 125 | ||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 109 GGCTGTGATGCGTGCATGAAGAGATCACGTGCTAGTTGGTACTGTCCAGCCGATGACGCT 168 Query 126 TTCCTATGCCAAAGCTGCGACTCCTCGATCCACTCGGCTAACCATTTAGCGAAACGGCAC 185 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 169 TTCCTATGCCAAAGCTGCGACGCCTCGATCCACTCGGCTAACCATTTAGCGAAACGGCAC 228 Query 186 GAACGCGTCCGGTTACAATCATCTTCGTCGACGGAGACGGCAGACAAAACGACGTCGGTA 245 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 229 GAACGTGTCCGGTTACAATCATCTTCGCCGACGGAGACGGCAGACAAAACGACGTCGGTA 288 Query 246 TGGTACGAAGGTTTCAGGAGAAAGGCGAGAACTCCTAGGAACAAGGGTTTG-GCGTTTGA 304 ||||||||||| |||||||||||||||||||| ||||||| |||| | ||| |||||||| Sbjct 289 TGGTACGAAGGATTCAGGAGAAAGGCGAGAACGCCTAGGAGCAAGAG-TTGTGCGTTTGA 347 Query 305 GAAGTTGTTGCAGGTTGAG-GAGAACGATCCTCTTGTTCCGGATCTTGGTGGAGAAGAAG 363 |||||||||||| | ||| | |||||||||||||||||||| ||||||||||| |||| Sbjct 348 GAAGTTGTTGCAAATCGAGTCA-AACGATCCTCTTGTTCCGGAGCTTGGTGGAGACGAAG 406 Query 364 AAGAAGTG-TTTTTCTCGTTCTCTTCCGTAGAAGAAAACGACGAGAGTCTGAATTGTTGC 422 | || | | |||||||||||||| ||||||||||||| ||| |||||||||||||||||| Sbjct 407 ATGATG-GCTTTTTCTCGTTCTCCTCCGTAGAAGAAACCGAGGAGAGTCTGAATTGTTGC 465 Query 423 GTGCCAGTTTTCGATCCTTTCTCAGACATGGTGATTGATGATATCAACGGCTTTTGCTTA 482 ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 466 GTGCCTGTTTTCGATCCTTTCTCAGACATGCTGATTGATGATATAAACGGCTTTTGCTTA 525 Query 483 GTTCCCGATGAAGTCATCAATAACACTACTAATGGA-GAAGAACTAGGAGAACTCGAG-A 540 ||||| ||||||| ||||||||||||||| | | | |||| |||||||| ||||| | Sbjct 526 GTTCCTGATGAAG---TCAATAACACTACTACT-AATGGAGAATTAGGAGAAGTCGAGAA 581 Query 541 GGGAAGTCATGGACGATGAAGGTTTTATTGGGTTCTTGCCGTTGAATATGGATCTTGAGG 600 || || |||||||||||||||||||||| |||||| |||| ||| ||||||||||||||| Sbjct 582 GGCAA-TCATGGACGATGAAGGTTTTATGGGGTTCGTGCCATTGGATATGGATCTTGAGG 640 Query 601 ATCTCACTATGGATGTGGAGAGGTTACTTGAGGAAGAACAACTTTGCTTGGGATTCAAGG 660 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 641 ATCTCACTATGGACGTGGAGAGTTTACTTGAGGAAGAACAACTTTGCTTGGGATTCAAGG 700 Query 661 AACCAAACGATATTGGAGTTATCAAAGAAGAGAATAACGTAGAGTTTGAGATTAATTGTA 720 ||||||||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||| Sbjct 701 AACCAAACGATGTTGGAGTCATCAAAGAAGAGAATAAAGTAGGGTTTGAGATTAATTGTA 760 Query 721 AGGATTTGAAGAGGGTTAAAGAT---GA-G--GAAGAAGAAGAAGCCAAGTGTGAAAATG 774 |||||||||||||||| |||||| || | |||||||||||||||||||||||||||| Sbjct 761 AGGATTTGAAGAGGGTGAAAGATGAAGATGAAGAAGAAGAAGAAGCCAAGTGTGAAAATG 820 Query 775 GAGGATCAAAGGATAGTGATGGAGAAGCATCTAAGGATGAAGATGGAAAGACGAGTTTGT 834 |||||||||||||||||||| |||||||||| || ||| ||||| ||||||| ||||||| Sbjct 821 GAGGATCAAAGGATAGTGATAGAGAAGCATCAAATGATAAAGATAGAAAGACAAGTTTGT 880 Query 835 TTCTGAGATTAGATTATGAAGCTGTGATTAGTGCTTGGGATAATCATGGTTCGCCGTGGA 894 |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct 881 TTCTGAGATTAGATTATGGAGCTGTGATTAGTGCTTGGGATAATCACGGTTCGCCGTGGA 940 Query 895 AAACCGGAATCAAATCGGAGTGCTTGTTGGGAGGGAACACGTGTCCGTCACATGCTGTAG 954 |||||||||||||| |||||||| ||||||||||||||||||||| | | |||| ||| | Sbjct 941 AAACCGGAATCAAACCGGAGTGCATGTTGGGAGGGAACACGTGTCTGCCTCATGTTGTGG 1000 Query 955 GTGGGTTCGATG-AGTTGGTGTCGCCCGTCGGATCGGTGACACGCCAGCAAGTGAGAGAC 1013 |||||| ||| | | ||| ||||| || ||||||||||||||| ||||||| ||||||| Sbjct 1001 GTGGGTACGA-GAAATTGATGTCGAGCGACGGATCGGTGACACGTCAGCAAGGGAGAGAC 1059 Query 1014 GGAGGAGGATCGGACGGGGAGAGAGAGGCGAGGGTTTTGAGGTACAAGGAGAAACGGAGG 1073 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1060 GGAGGAGGATCGGACGGGGAGAGAGAGGCGAGGGTTTTGAGGTACAAGGAGAAGCGGAGG 1119 Query 1074 ACGAGATTGTTCTCAAAGAAGATAAGATACGAGGTTCGGAAACTCAATGCCGAGCAGAGA 1133 ||||| |||||||||||||| |||||||| |||||||||||||| || || ||||||||| Sbjct 1120 ACGAGGTTGTTCTCAAAGAAAATAAGATATGAGGTTCGGAAACTTAACGCTGAGCAGAGA 1179 Query 1134 CCTCGAATCAAAGGTCGGTTCGTGAAGAGAACGTCACTTTTGACGTGATTTGATTTACTT 1193 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 1180 CCTCGAATCAAAGGTCGTTTCGTGAAGAGGACGTCACTTTTGACGTGATTTGATTTACTT 1239 Query 1194 TAATGAACACTTTAAAGAGCTTGTAATTAAGAACTTTGAAGTAATTGTGGTAATGTACT- 1252 |||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| Sbjct 1240 TAATCAACACTTTAAAGATCTTGTAATTAAGACCTTTGAAGTAATTGTCGTAATGTACTG 1299 Query 1253 ACA-AATTTAACTGAAAATCTTGGGGCCG 1280 | | ||| |||||||| ||||||||||| Sbjct 1300 A-ATAATG-AACTGAAACTCTTGGGGCCG 1326 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 63001683975 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5