BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476660 Length=1670 Score E Sequences producing significant alignments: (Bits) Value AT1G75180.1 | Symbols: | Erythronate-4-phosphate dehydrogenase... 1923 0.0 AT1G19400.1 | Symbols: | Erythronate-4-phosphate dehydrogenase... 686 0.0 AT5G04790.1 | Symbols: | unknown protein; Has 1807 Blast hits ... 191 2e-47 > AT1G75180.1 | Symbols: | Erythronate-4-phosphate dehydrogenase family protein | chr1:28215836-28218330 REVERSE LENGTH=1543 Length=1543 Score = 1923 bits (1041), Expect = 0.0 Identities = 1213/1290 (94%), Gaps = 35/1290 (3%) Strand=Plus/Plus Query 407 ATATGTTTTGGATTCAGTGAGAAATAGAAATTGATTTTGG-TTTC-TTAATCATGGTGGA 464 |||||||||||||||||||||||| ||| ||||||||||| |||| |||||||||||||| Sbjct 230 ATATGTTTTGGATTCAGTGAGAAACAGAGATTGATTTTGGTTTTCTTTAATCATGGTGGA 289 Query 465 GCCTTATGAGACACGTAACAACGGTGAAGCTTCCCAGATGATCAGATATCAGAGTTATAA 524 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 290 GCCTTATGAGACACGTAACAACGGTGAAGCATCCCAGATGATCAGATATCAGAGTTATAA 349 Query 525 CCATCACAATTCCAGATTACCATCACCATTATCATCGCCATTACTTGATTTGAGAGTGTT 584 |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct 350 CCATCACAATTCCAGACTACCATCTTCATTATCATCGCCATTGCTTGATTTGAGAGTGTT 409 Query 585 CTATGTCAGAATCAGCAATTTCAAGGTGGATCATTCGACACCTGAGGTCCTCACCATTAC 644 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 410 CTATGTCAGAATCAGTAATTTCAAGGTGGATCATTCGACACCTGAGGTTCTCACCATTAC 469 Query 645 TCATATTCCTTTGGATCCAGATTCACTTCTGGAGATAAATGGTGTTAGAATGAGCATGTA 704 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 470 TCATATTCCTTTGGATCCAGATTCACTTCTGGAGATTAATGGTGTTAGAATGAGCATGTA 529 Query 705 CTCTGAAGGAGTTTCTTCTCAGCTAAGGCGAGATCGTGTTGATAAGAAATCCGAAGTAGC 764 |||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| || Sbjct 530 CTCTGAAGGAGTTTCTTCTCAGCTTAGGCGTGATCGTGTTGATAAGAAATCTGAAGTTGC 589 Query 765 TACTTTTATCAGCACAGACAATATCAGGTTATCTGGTAGCGTGAAGTTTGAGGTTTATGA 824 ||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| Sbjct 590 TACTTTTATCAGCACGGATAATATCAGGTTATCTGGTAGTGTGAAGTTTGAGGTTTATGA 649 Query 825 CAAAGATGAGCTGGTTTTGTCTGGAACTCTTGAGATGTCTGGTAGTAATGGTTTCACTGG 884 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 650 TAAAGATGAGCTGGTTTTGTCTGGAACGCTTGAGATGTCTGGTAGTAATGGTTTCACTGG 709 Query 885 TGAATCTAAGCATAGCGTGAAGCGGTGGAACATGAATTGTGAAGCTGAGATCACTGCAGG 944 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 710 TGAATCTAAGCATAGCGTGAAGCGGTGGAACATGAATTGTGAAGCTGAGATCACTGCAGA 769 Query 945 GTCTGGTTTCTTGAAGGAGAAACATATTGGTGGTTCGGAGTTATCATCTCCATTGCCAAC 1004 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 770 GTCTGGTTTCTTGAAGGAGAAACATATTGGTGGTTCGGAGTTATCTTCTCCATTGCCAAC 829 Query 1005 TATTGAAGTCTATGTCACTGGCTGCTTTTCAGGAACTCCCATCATCTTAACCAAGACTCT 1064 |||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||| Sbjct 830 TATTGAAGTCTATGTCACTGGCTGCTTTTCTGGAACTCCTATCATCCTAACGAAGACTCT 889 Query 1065 TCAGCTTGGTTTCAGAAAGAAGCACGGTAGAGTGGCTGCATTAGATTCGATTCCGGAGTA 1124 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct 890 ACAGCTTGGTTTCAGAAAGAAGCACGGTAGAGTGACTGCATTAGATTCGATTCCCGAGTA 949 Query 1125 TGAAGCTGATGAGCCTCATAAAGGAAACTCATCTGAGCTTGATTATCAGGTAACAGAATA 1184 |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 950 TGAAACTGATGAGCCTCATAAAGGAAACTCATCTGAGCTTGATTATCAGGTTACTGAATA 1009 Query 1185 TGGAAGTTATAAACAAGAATATGAAGGAGAACACAGCGACATGTATTGGAATAGAGAGTA 1244 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1010 TGGAAGTTATAAACAAGAATATGAAGGAGAACACAGCGACATGTACTGGAATAGAGAGTA 1069 Query 1245 CGCAGATGGTGAAGATGGTGAGATGTCGTGGTTCAACGCCGGTGTGAGGGTTGGTGTGGG 1304 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1070 CGCAGATGGTGAAGATGGTGAGATGTCGTGGTTCAACGCTGGTGTGAGGGTTGGTGTGGG 1129 Query 1305 AATTGGTCTTGGTGTCTGTGTAGGTCTTGGCATTGGGGTTGGCCTTCTAGTGCGTACCTA 1364 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1130 AATTGGTCTTGGTGTCTGTGTAGGTCTTGGCATTGGGGTTGGCCTTCTGGTGCGTACCTA 1189 Query 1365 TCAATCAACCACCAGAAACTTCAGAAGGAGGATTATCTAGTTTCAT-CTAAATTGCCTCA 1423 |||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 1190 TCAATCGACCACCAGAAACTTCAGAAGGAGGATTATCTAGTTTCATTC-AAATTGCCTCA 1248 Query 1424 AGCTTCTTCTActctctctctctctcCCACTAACTCCAATCCGTTGCACATCACTTTTGA 1483 |||||| ||||||||||| | |||| | | ||||||||||||||||||||||||||| Sbjct 1249 AGCTTCATCTACTCTCTC-C-CTCT---A--A-CTCCAATCCGTTGCACATCACTTTTGA 1300 Query 1484 CTGCAGAACTCTAAGCTATATAGTCTAAGCTAATACTGCTGTGTAGTATAATTTTT---- 1539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1301 CTGCAGAACTCTAAGCTATATAGTCTAAGCTAATACTGCTGTGTAGTATAATTTTTGTTT 1360 Query 1540 ------CTTTT----CTCTTTGTGCCTTCAAATTTTGAAAGAAATCATTCTCCCTTCTT- 1588 ||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1361 TATGTACTTTTTAATCTCTTTGTGCCTTCAAATTTTGAAAGAAATCATTTTCCCTTCTTC 1420 Query 1589 --GTGTTTGTTGAGATTCAGACTGAAAGAAAGAAAGCTTGTTG-----A-TGCGAATCTT 1640 ||||||| ||||||||||| ||||||||| ||||||||||| | |||||||||| Sbjct 1421 TTGTGTTTGGTGAGATTCAGATTGAAAGAAACAAAGCTTGTTGCTGGTAATGCGAATCTT 1480 Query 1641 ATTGTCTGCTTCCTGTAAATAAAATGCTTA 1670 || |||||||||||||||||||||||||| Sbjct 1481 GTTTTCTGCTTCCTGTAAATAAAATGCTTA 1510 > AT1G19400.1 | Symbols: | Erythronate-4-phosphate dehydrogenase family protein | chr1:6712038-6714247 REVERSE LENGTH=1667 Length=1667 Score = 686 bits (371), Expect = 0.0 Identities = 783/971 (81%), Gaps = 72/971 (7%) Strand=Plus/Plus Query 455 TCATGGTGGAGCCTTATGAGACACGTAACAACGGTGAAGCTTCCCAGATGATC-AGATAT 513 |||||| |||||||| |||||||| | ||| |||||||| | || || ||| |||||| Sbjct 570 TCATGGAGGAGCCTTGTGAGACACTTGACAGTGGTGAAGCCTATCAAAT-ATCTAGATAT 628 Query 514 CAGAGTTATAACCATCACAATTCCAGATTACCATCACCATTATCATCGCCATTACTT-GA 572 || | |||||||| |||| |||||| | | | | ||| || || | || || Sbjct 629 CATAACTATAACCAACACAGCTCCAGA--AGC-T---C---ATC-TC-CC--TGGTTGGA 675 Query 573 TTTGAGAGTGTTCTATGTCAGAATCAGCAATTTCAAGGTGGATCATTCGACACCTGAGGT 632 ||||||||||||||||||| | || ||||||||| |||||| |||| || |||||||| Sbjct 676 TTTGAGAGTGTTCTATGTCCGGATAAGCAATTTCGTGGTGGAAGATTCAACTCCTGAGGT 735 Query 633 CCTCACCATTACTCATATTCCTTTGGATCCAGATTCACTTCTGGAGATAAATGGTGTTAG 692 |||||| || | ||| |||||| ||||||||||| | ||| ||||||| || |||||||| Sbjct 736 CCTCACTATCAATCACATTCCTCTGGATCCAGATACGCTTTTGGAGATTAACGGTGTTAG 795 Query 693 AATGAGCATGTACTCTGAAGGAGTTTCTTCTCAGCTAAGGCGAGATCGTGTTGATAAGAA 752 |||| | |||||||| ||||||| |||||| ||||| ||| ||||||| ||||||||||| Sbjct 796 AATGGGAATGTACTCAGAAGGAGGTTCTTCACAGCTTAGGAGAGATCGGGTTGATAAGAA 855 Query 753 ATCCGAAGTAGCTACTTTTATCAGCACAGACAATATCAGGTTATCTGGTAGCGTGAAGTT 812 ||| |||| |||||||| | ||||||||||||||||||||||| ||||||| |||||||| Sbjct 856 ATCTGAAGAAGCTACTTATGTCAGCACAGACAATATCAGGTTAACTGGTAGTGTGAAGTT 915 Query 813 TGAGGTTTATGACAAAGATGAGCTGGTTTTGTCTGGAACTCTTGAGATGTCTGGTAGTAA 872 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 916 TGAGGTTTATGACAAAAATGAGCTAGTTTTGTCTGGAACTCTTGAGATGTCTGGTAGTAA 975 Query 873 TGGTTTCACTGGTGAATCTAAGCATAGCGTGAAGCGGTGGAACATGAATTGTGAAGCTGA 932 |||||||||||| ||||| ||| || || | ||||| ||||||||||| ||||| Sbjct 976 TGGTTTCACTGGGGAATCAAAGAAT--CG--A-----TGGAAAATGAATTGTGAGGCTGA 1026 Query 933 GATCACTGCAGGGTCTGGTTTC-TTGAAGGAGAA-A-CATATTGGTGGTTCG-GAGTTAT 988 | |||||||||||||||||||| || |||||||| | |||| | | | | ||||||| Sbjct 1027 GGTCACTGCAGGGTCTGGTTTCCTT-AAGGAGAAGAGCATAAACG-G-T-CAAGAGTTAT 1082 Query 989 CATCTCCATTGCCAACTATTGAAGTCTATGTCACTGGCTGCTTTTCAGGAACTCCCATCA 1048 | ||||||||||||||||| || |||||||| ||||| ||||| |||||||| ||||||| Sbjct 1083 CGTCTCCATTGCCAACTATCGAGGTCTATGTTACTGGTTGCTTCTCAGGAACACCCATCA 1142 Query 1049 TCTTAACCAAGACTCTTCAGCTTGGTTTCAGAAAGAAGCACG-GTAGAGTGGCTG-CATT 1106 |||||||||||||||| || |||||||| | ||||||||| | ||||| | || |||| Sbjct 1143 TCTTAACCAAGACTCTGCAACTTGGTTTGAAAAAGAAGCA-GAGTAGAA-GAATGGCATT 1200 Query 1107 AGATTCGATTCCGGAGTATGAAGCTG-ATGAGCCTCATAAAGGAAAC-TCATCTG-AGCT 1163 ||| | ||||| ||||||||| ||| | |||||||| |||| | || || | || | || Sbjct 1201 GGATGCAATTCCTGAGTATGAAACTGCA-GAGCCTCAGAAAG-ACACCTCCTATGCA-CT 1257 Query 1164 TGAT-TATCAGGTAACAG-A-A-TATGG-AAGTTATAAACAAGAATATGAAGGAGAACAC 1218 |||| | ||||| |||| | | || || || ||| ||| | ||||| |||||||| || Sbjct 1258 TGATCT-TCAGGCAACAACAGAGTACGGGAA-TTACAAAGAGGAATACGAAGGAGA-CA- 1313 Query 1219 AGCGACATGTATTGGA-ATAGAGAGTACGCAGATGGTGAAGATGGTGAGATGTCGTGGTT 1277 ||||||||| | || |||| ||| | ||| | || |||||||| ||||| Sbjct 1314 -------TGTATTGGAGA-AGTGAGT--GCA--T--TGATG--GG-GAGATGTCATGGTT 1356 Query 1278 CAACGCCGGTGTGAGGGTTGGTGT-GGGAATTGGTCTTGGTGTCTGTGTAGGTCTTGGCA 1336 || || ||||| ||||||||||| |||| | || |||||||||||||| |||||||| | Sbjct 1357 TAATGCAGGTGTAAGGGTTGGTGTTGGGA-TAGGACTTGGTGTCTGTGTTGGTCTTGGGA 1415 Query 1337 TTGGGGTTGGCCTTCTAGTGCGTACCTATCAATCAACCACCAGAAACTTCAGAAGGAGGA 1396 |||| || || ||||| || ||||| ||||||||||| ||||||| |||||| |||||| Sbjct 1416 TTGGTGTCGGTCTTCTCGTTCGTACTTATCAATCAACTACCAGAACCTTCAGGAGGAGGC 1475 Query 1397 TTATCTAGTTT 1407 || |||||||| Sbjct 1476 TTCTCTAGTTT 1486 > AT5G04790.1 | Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:1388155-1388319 REVERSE LENGTH=165 Length=165 Score = 191 bits (103), Expect = 2e-47 Identities = 138/153 (90%), Gaps = 9/153 (6%) Strand=Plus/Plus Query 1296 TGGTGTGGGAATTGGTCTTGGTGTCTGTGTAGG-TCTTGGCATTGGGGTTGGCCTTCTAG 1354 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| || | Sbjct 18 TGGTGTGGGAATTGGTCTTGGTGTCTGTGTAGGTTTTTGGCATTGGGGTTGGCCTGCTGG 77 Query 1355 TGCGTACCTATCAATCAACCACCAGAAACTTCAGAAGGAGGATTATCTAGTTTCAT-CTA 1413 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 78 TTCGCACCTATCAATCAACCACCAGAAACTTCAGAAGGAGGATTATCTAGTTTCATTC-A 136 Query 1414 AATTGCCTCAAGCTTCTTCTActctctctctct 1446 |||||||| | || || || ||||||| |||| Sbjct 137 AATTGCCT-A--CT-CT-CT-CTCTCTCCCTCT 163 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82529695980 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5