BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476684 Length=1431 Score E Sequences producing significant alignments: (Bits) Value AT1G75380.1 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in ... 1842 0.0 AT1G19660.1 | Symbols: | Wound-responsive family protein | chr... 928 0.0 > AT1G75380.1 | Symbols: ATBBD1, BBD1 | bifunctional nuclease in basal defense response 1 | chr1:28281389-28284045 REVERSE LENGTH=1550 Length=1550 Score = 1842 bits (997), Expect = 0.0 Identities = 1104/1156 (96%), Gaps = 5/1156 (0%) Strand=Plus/Plus Query 1 tctctcaagtgaagaatctctctctatctctatcttcttccattgatcctttcctctctt 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3 TCTCTCAAGTGAAGAATCTCTCTCTATCTCTATCTTCTTCCATTGATCCTTTCCTCTCTC 62 Query 61 TGGCTTGTGTCGGAGCTCTTCGATCTTCTTCTTGATCGATCTACGTGCGACTGTTTGTAC 120 |||||||| || |||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 63 TGGCTTGTTTCAGAGCTCTTCGATCTTCTTCTTGATCGATCTACGTGCCACTGTTTATAC 122 Query 121 CATTCACGATCTATTCCGATTCCAATTGTTGCTTACTAAA-AGAAAGAAAGATGAAATCG 179 ||||||||||||| |||| || ||||| || || || ||| | ||| ||||||| |||| Sbjct 123 CATTCACGATCTAATCCGGTTTCAATTATTACTCACGAAATCG-AAGGAAGATGAGATCG 181 Query 180 CTTCAAGCACCAGTTGTTTGTCCTGCAATTCGTCCAAGACAAGTAGGTGCATGTGCTTCA 239 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 182 GTTCAAGCACCAGTTGTTTGTCCTGCAATTCGACCAAGACAAGTAGGTGCATGTGCTTCA 241 Query 240 CTTGTTAACTACACTGGTCTGAAACCTAGAAGACAATTCTGGGGTAATCGGACAAAAGGT 299 || || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 242 CTAGTCAACTACACTGGTCTGAAACCTAGAAGCCAATTTTGGGGTAATCGGACAAAAGGT 301 Query 300 TTCAAGTCTCAGGG--C-ACCACCACAATCACTCTTAGATTGTGCGACAAGAGTATCAAG 356 ||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||||| Sbjct 302 GTCAAGTCTCAGGGCACTACCACAACAATCACTCTTAGATTGTGCAACAAGAGTATCAAG 361 Query 357 TGTGTTTTCAGCTCTCACTCTGATGGTAATGGAAGCACTGCAGAGAATTTTAATGAGAAT 416 ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||| Sbjct 362 TGTGTTTTCAGCTCTCACTCTGATGGTAATGGAAGCACTGCTGAAAATTTCAATGAAAAT 421 Query 417 GATGAGGAATATGTTAACTCTAGTGTAGTGGAAGCTGTTGAAGTAAAAAGTGGAGCAGAT 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 422 GATGAGGAATATGTTAACTCTAGTGTAGTGGAAGCTGTTGAAGTAAAAAGTGGAGCAGAT 481 Query 477 GGTTTCATGGTGAAGATGAGGGATGGTAGACAACTACGATGTGTCCATAACAATCCTCAA 536 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 482 GGTTTTATGGTGAAGATGAGGGATGGTAGGCAACTACGATGTGTCCATAACAATCCTCAA 541 Query 537 GGAGGGCATTTACCAGATTATGCTCCTCACCCTGCTATTGTGTTGAAAATGGAAGATGGA 596 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 542 GGAGGGCATTTACCAGATTATGCTCCACACCCTGCTATTGTCTTGAAAATGGAAGATGGA 601 Query 597 ACTGGTCTTCTCCTTCCCATTATCGTGTTGGAGATGCCTAGTGTGTTACTTATGGCAGCA 656 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 602 ACTGGTCTTCTCCTTCCGATTATCGTCTTGGAGATGCCTAGTGTGTTACTTATGGCAGCA 661 Query 657 ATGACCAATGTCCAAATTGCAAGACCCACCATGTATCAAGTGGTGAAGGAGATGGTGGAC 716 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 662 ATGACCAATGTCCAAATTGCAAGACCAACCATGTATCAAGTGGTGAAGGAAATGGTGGAC 721 Query 717 AAGATGGGTTATGAAGTTAGACTTGTTAGAGTCACCAAAAGAGTTCACGAGGCGTATTTT 776 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 722 AAGATGGGTTACGAAGTTAGACTTGTTAGAGTCACCAAAAGAGTTCACGAGGCATATTTT 781 Query 777 GCCCAGTTATACCTTTCAAAGGTGGGTAATGCCTCGGAGTGTGTCAGCTTTGATCTTAGG 836 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 782 GCCCAGTTATTCCTTTCAAAGGTGGGTAATGCCTCGGAGTGTGTCAGCTTTGATCTTAGG 841 Query 837 CCTTCAGATGCAATCAATATCGCTGTTAGATGCAAGATACCTATCCAAGTGAACAAGTAC 896 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 842 CCTTCAGATGCAATCAATATAGCTGTTAGATGCAAGATACCTATCCAAGTGAACAAGTAC 901 Query 897 CTTGCATATAGTGATGGAATGAGAGTCATTGAGTCTGGGAAGATATCAACGCCGACACCA 956 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| Sbjct 902 CTTGCATATAGTGATGGAATGAGAGTCATTGAGTCAGGGAAGATATCAACACCGGCACCA 961 Query 957 GCTTCAGATGGTTTATTATTTACTGAACAAGACCGACCTAATGGTCAGGCTTGTCTTGAT 1016 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 962 GCTTCAGATGGTTTATTATTTACTGAACAAGACCGACCAAATGGTCAGGCTTGTCTTGAT 1021 Query 1017 ACGAAAGAGTTCAATATTTTGAGCAAAATGATGCAAGCTGTTGATGAAGAGCGATATGAT 1076 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1022 ACGAAAGAGTTCAATATTTTGAGCAAAATGATGCAAGCCGTTGATGAAGAGCGATATGAT 1081 Query 1077 GAAGCCGCTGAGTGGAGAGACAAGCTTGGTCAGTTTCGGGCCAAGCGTAACCTGAGGAAA 1136 |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 1082 GAAGCCGCTGAGTGGAGAGACAAGCTTGGTCAGTTTCGGGCCAAACGTAACTTGAGGAAA 1141 Query 1137 TACACATGAGAGAGGT 1152 |||||||||||||||| Sbjct 1142 TACACATGAGAGAGGT 1157 Score = 327 bits (177), Expect = 1e-88 Identities = 226/247 (91%), Gaps = 14/247 (6%) Strand=Plus/Plus Query 1152 TCGATCAACAATTATTGGCTGTGTACAT-AATTAAGAAG-AAGTCATTGGTCGGAATCAA 1209 |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| | Sbjct 1232 TCGATCAACAATTATTGGCTGTGTACATAAACTAAGAAGAAAGTCATTGGTCGGAATC-A 1290 Query 1210 AAGTGGAGGAAGAAGCCTGAAGTGTCGTCTCTGTATGATGGAGATCGGAGAATGCTTCTG 1269 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1291 AAGTGGAGGAAGAAGCCTGAAGTGTCGTCTCTGTATGATGGAGATCGAAGAATGCTTCTG 1350 Query 1270 CACTTTACCCATTTCCCaaaaaaa-aaacaaaaaaaaaTTGTATAA---A-GCATGTAGC 1324 ||||||||||||||||| |||||| |||||||||||||| |||||| | | ||||||| Sbjct 1351 CACTTTACCCATTTCCCTAAAAAATAAACAAAAAAAAAT-GTATAATGTATGTATGTAGC 1409 Query 1325 GTGATGTGTACATATTATATTACTTATTACATTATGCAAATTAAGCTCACTCTAATTAAT 1384 ||||||||||||||||| ||| ||| | | | ||||||||||||||||||||||||| | Sbjct 1410 GTGATGTGTACATATTAC-TTA-TTAAT-C-T-ATGCAAATTAAGCTCACTCTAATTACT 1464 Query 1385 TTTAAGT 1391 ||||||| Sbjct 1465 TTTAAGT 1471 > AT1G19660.1 | Symbols: | Wound-responsive family protein | chr1:6799981-6802685 REVERSE LENGTH=1412 Length=1412 Score = 928 bits (502), Expect = 0.0 Identities = 841/1002 (84%), Gaps = 33/1002 (3%) Strand=Plus/Plus Query 168 AAGATGAAATCGCTTCAAGCACCAGTTGTTTGTCCT-GCAATTCGTCCAAGACAAGTAGG 226 ||||||| |||||||||||||| |||||||| ||| | ||||||| |||||| | || Sbjct 129 AAGATGAGGTCGCTTCAAGCACCGGTTGTTTGCCCTAG-TGTTCGTCCCAGACAATTGGG 187 Query 227 TG-CATGTGCTTCACTTGTTAACTACACTGGTCT-G-AAAC-------CT-AGAAGACAA 275 || | | ||||| |||||| |||| | || || | | |||| || |||| |||| Sbjct 188 TGTC-TCTGCTTTACTTGTCAACTGCTCT-GTTTCGAAAACTAGGAGTCTCAGAAAACAA 245 Query 276 TTCTGGGGTAATCGGA-CAAAAGGTTTCAAGTCTCAGGGC-ACCACCA--CAATC-AC-T 329 ||||||||||| | || ||||| | ||||||||| ||| | | || |||| | | Sbjct 246 TTCTGGGGTAACCAGACCAAAA-ATGACAAGTCTCA-GGCTGCTA-CAGTGAATCTTCGT 302 Query 330 CT-TAGATT--GTGCG-ACAAGAGTATCAAGTGTGTTTTCAGCTCTCACTCTGATGGTAA 385 || | || | | | | ||||||||||| ||| |||||||||| ||||||||||||| Sbjct 303 CTGCATCTTCGGAG-GTATAAGAGTATCAAATGTCTTTTCAGCTCGCACTCTGATGGTAC 361 Query 386 TGGAAGCACTGCAGAGAATTTTAATGAGAATGATGAGGAATATGTTAACTCTAGTGTAGT 445 |||||||| ||||||||||| || ||||| |||||||| ||||| || ||||||||| | Sbjct 362 CGGAAGCACAGCAGAGAATTTCAACGAGAACGATGAGGATTATGTCAAGTCTAGTGTATT 421 Query 446 GGAAGCTGTTGAAGTAAAAAGTGGAGCAGATGGTTTCATGGTGAAGATGAGGGATGGTAG 505 |||||||||||| |||||||||||| |||||||||||||||||||||||| |||||| || Sbjct 422 GGAAGCTGTTGAGGTAAAAAGTGGACCAGATGGTTTCATGGTGAAGATGAAGGATGGGAG 481 Query 506 ACAACTACGATGTGTCCATAACAATCCTCAAGGAGGGCAT-TTACCAGATTATGCTCCTC 564 ||||| ||||||||||| || ||||||||||||||| || || ||| |||||||||| | Sbjct 482 GCAACTTCGATGTGTCCACAATAATCCTCAAGGAGGGAATCTT-CCAAATTATGCTCCAC 540 Query 565 ACCCTGCTATTGTGTTGAAAATGGAAGATGGAACTGGTCTTCTCCTTCCCATTATCGTGT 624 | |||| |||||| |||||||||||||||||||||||||||| || ||||||||||| | Sbjct 541 ATTCTGCAATTGTGCTGAAAATGGAAGATGGAACTGGTCTTCTTCTCCCCATTATCGTCT 600 Query 625 TGGAGATGCCTAGTGTGTTACTTATGGCAGCAATGACCAATGTCCAAATTGCAAGACCCA 684 ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||| Sbjct 601 TGGAGATGCCTAGTGTGTTACTTATGGCAGCAATGACAAATGTTCAAATAGCAAGGCCCA 660 Query 685 CCATGTATCAAGTGGTGAAGGAGATGGTGGACAAGATGGGTTATGAAGTTAGACTTGTTA 744 | |||||||||||||||||||| ||||| ||||| ||||||||||| ||||| ||||||| Sbjct 661 CTATGTATCAAGTGGTGAAGGACATGGTAGACAAAATGGGTTATGAGGTTAGGCTTGTTA 720 Query 745 GAGTCACCAAAAGAGTTCACGAGGCGTATTTTGCCCAGTTATACCTTTCAAAGGTGGGTA 804 |||| |||| ||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct 721 GAGTTACCACAAGAGTTCACGAGGCATATTTCGCAGAGTTATACCTTTCAAAGGTGGGGG 780 Query 805 ATGCCTCGGAGTGTGTCAGCTTTGATCTTAGGCCTTCAGATGCAATCAATATCGCTGTTA 864 || ||||| ||||||||||| |||||| | ||||| |||||||| ||||| ||||||| Sbjct 781 ATAAGTCGGATTGTGTCAGCTTCGATCTTCGTCCTTCTGATGCAATTAATATAGCTGTTA 840 Query 865 GATGCAAGATACCTATCCAAGTGAACAAGTACCTTGCATATAGTGATGGAATGAGAGTCA 924 |||||||| ||||||| ||||| |||||||| || || |||||||||||||||||||||| Sbjct 841 GATGCAAGGTACCTATTCAAGTCAACAAGTATCTAGCTTATAGTGATGGAATGAGAGTCA 900 Query 925 TTGAGTCTGGGAAGATATCAACGCCGACACCAGCTTCAGATGGTTTATTATTTACTGAAC 984 | || || || ||| |||||| || ||||| ||||| ||||||||||| |||||||||| Sbjct 901 TCGATTCCGGAAAGCTATCAAAGCAAACACCTGCTTCTGATGGTTTATTGTTTACTGAAC 960 Query 985 AAGACCGACCTAATGGTCAGGCTTGTCTTGATACGAAAGAGTTCAATATTTTGAGCAAAA 1044 |||||| || ||||||||| ||||| ||||||| ||||||||| || | | || || | Sbjct 961 TAGACCGGCCAAATGGTCAGCCTTGTTTTGATACAAAAGAGTTCGATCTAGTAAGGAACA 1020 Query 1045 TGATGCAAGCTGTTGATGAAGAGCGATATGATGAAGCCGCTGAGTGGAGAGACAAGCTTG 1104 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 1021 TGATGCAAGCTGTTGATGAAGAACGGTATGATGAAGCCGCTGAGTGGAGAGACAAGCTTG 1080 Query 1105 GTCA-GTTTCGGGCCAAGCGTAACCTGAGGAAATACACATGA 1145 | || ||||| ||| || || || | ||||||||||||||| Sbjct 1081 G-CAAGTTTCAGGCAAAACGCAAATTAAGGAAATACACATGA 1121 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70531765725 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5