BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476691
Length=2084
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75410.1 | Symbols: BLH3 | BEL1-like homeodomain 3 | chr1:28... 3061 0.0
AT1G19700.1 | Symbols: BEL10, BLH10 | BEL1-like homeodomain 10 ... 634 1e-180
> AT1G75410.1 | Symbols: BLH3 | BEL1-like homeodomain 3 | chr1:28299792-28302603
REVERSE LENGTH=2139
Length=2139
Score = 3061 bits (1657), Expect = 0.0
Identities = 1983/2128 (93%), Gaps = 71/2128 (3%)
Strand=Plus/Plus
Query 1 AAAAATCGTCTCTTGGGATTGGGTGtcttctcttctctttctctctctttttgtcatcga 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 33 AAAAATCGTCTCTTGGGATTGGGTGTCTTCTCTT-TCTTTCTCTCTCTTTTTGTCATCGA 91
Query 61 ctgttcgaag---ttcttcttct-ccttttta--tctctgttcCCTGATTCAGCCACATC 114
|||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 92 CTGTTCGAAGTTCTTCTTCTTCTCCCTTTTTATCTCTCTGTTCCCTGATTCAGCCACATC 151
Query 115 CACAACATCTCTCTCTTTAGGGTTTT-AAAAGTTTATCAtctctctctctctTTCTCAGA 173
||| | | ||||||||| |||| | ||||||||| ||| ||||||||||||
Sbjct 152 CAC-A-A--TCTCTCTTT-CTCTTTTGTATAGTTTATCA----TCTAGCTCTTTCTCAGA 202
Query 174 CAAAACATCAATCGGATGAAACTCACTT--A-AAC---A-A----C-A---A--ATCCAA 216
|||||||||||||||||||||||||||| | ||| | | | | | ||||||
Sbjct 203 CAAAACATCAATCGGATGAAACTCACTTAAACAACAAAACACTTTCGATTTATTATCCAA 262
Query 217 TGGCTGTGTATTACCCAAATAGTGTCGGCATGCAATCTCTCTATCAAGAATCCATTTACC 276
|||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||
Sbjct 263 TGGCTGTGTATTACCCTAATAGTGTCGGCATGCAATCTCTTTACCAAGAATCCATTTACC 322
Query 277 TCAACG------aacaacaacaacaacaaGCTTCTTCTTCCTCTGCTGCATCTTTCTCTG 330
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 323 TCAACGAACAACAACAACAACAACAACAAGCTTCTTCTTCCTCTGCTGCATCTTTCTCCG 382
Query 331 AGATTGTCTCCGGCGATGTTCGAAACAACGAGATGGTATTTATCCCACCAACAAGCGACG 390
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 AGATTGTTTCCGGTGATGTTCGAAACAACGAGATGGTATTTATCCCACCAACAAGCGACG 442
Query 391 TTGCCGTCAACGGAAACGTAACGGTGTCAAGTAACGATCTAAGTTTTCACGGTGGAGGTC 450
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 443 TAGCCGTCAACGGAAACGTAACGGTGTCAAGTAACGATCTAAGCTTTCACGGTGGAGGAC 502
Query 451 TTTCTTTAAGCCTTGGTAATCAGATCCAATCAGCTGTCTCTGTTTCTCCGTTTCAGTATC 510
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 503 TTTCTTTAAGTCTTGGTAATCAGATCCAGTCAGCTGTCTCTGTTTCTCCGTTTCAGTATC 562
Query 511 ATTACCAGAATCTTTCAAACCAATTGAGTTACAATAATCTTAATCCTTCCACTATGTCTG 570
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 563 ATTACCAGAATCTTTCGAACCAATTGAGTTACAATAATCTTAATCCTTCTACTATGTCTG 622
Query 571 ATGAGGATGGGAAGAGCTTGAGTGGTCATCACCAACAACATCATCACTCTGATCAAATGA 630
||||| ||||||||||||||||| || | || || |||||||||||||||||
Sbjct 623 ATGAGAATGGGAAGAGCTTGAGT-GT--T------CATCAGCATCACTCTGATCAAATTT 673
Query 631 TACCTTCCTCTGGTTACAACAACAATGG---TAATGGTGTTGGTTTCTACAACAATTACC 687
|||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 674 TACCTTCCTCTGTTTACAACAACAATGGTAATAATGGTGTTGGATTCTACAACAATTACC 733
Query 688 GTTACGAGACATCAGGGTTTGTGAGTAGTGTTCTGAGATCTCGTTACCTTAAACCAACAC 747
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 734 GTTACGAGACATCAGGGTTTGTGAGTAGTGTACTGAGATCTCGTTACCTTAAACCAACAC 793
Query 748 AGCAATTGCTTGATGAAGTTGTTAGTGTAAGGAAAGATTTGAAATTGGGGAATAAGAAGA 807
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 794 AACAATTGCTTGATGAAGTTGTTAGTGTAAGGAAAGATTTGAAATTGGGGAATAAGAAGA 853
Query 808 TGAAGAACGATAAAGGTCAAGACTTTCAAAATGGGTCGAGTGATAACATTACAGAAGATG 867
||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 854 TGAAGAATGATAAAGGTCAAGACTTTCACAATGGGTCTAGTGATAACATTACAGAAGATG 913
Query 868 AGAAATCTCAATCGCAGGAGTTATCTCCTTCAGAACGTCAGGAGCTACAGAGCAAGAAGA 927
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 914 ATAAATCTCAATCGCAGGAGTTGTCTCCTTCAGAACGTCAGGAGCTACAGAGCAAGAAGA 973
Query 928 GCAAGCTCTTAACAATGGTGGATGAGGTAGATAAAAGGTATAACCAATACCACCATCAAA 987
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 974 GCAAGCTTTTAACAATGGTGGATGAGGTAGATAAAAGGTATAACCAATACCATCATCAAA 1033
Query 988 TGGAAGCTTTAGCATCGTCTTTCGAGATGGTAACAGGTCTTGGAGCAGCTAAGCCTTACA 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 TGGAAGCTTTAGCATCGTCTTTCGAGATGGTAACAGGTCTTGGAGCAGCTAAGCCTTACA 1093
Query 1048 CATCGGTCGCTCTGAATAGAATCTCTCGCCATTTCCGCTGCTTGCGCGATGCGATAAAAG 1107
|||| || |||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct 1094 CATCCGTAGCTCTGAATAGAATCTCTCGCCATTTCCGCTGTTTACGCGACGCGATAAAAG 1153
Query 1108 AGCAGATTCAGGTAATCAGAGGGAAGCTTGGGGAGAGAGAGACTTCTGATGAACAAGGAG 1167
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1154 AACAGATTCAGGTGATCAGAGGGAAGCTTGGGGAGAGAGAGACTTCTGATGAACAAGGAG 1213
Query 1168 AGAGGATACCGCGTCTGAGGTATTTAGATCAACGGTTGAGACAACAGAGAGCTTTGCATC 1227
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1214 AGAGGATACCGCGTCTTAGGTACTTAGATCAACGGTTGAGACAACAGAGAGCTTTGCATC 1273
Query 1228 AACAGCTTGGAATGGTTAGACCAGCTTGGAGACCACAAAGAGGCTTACCTGAAAACTCTG 1287
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 AACAACTTGGAATGGTTAGACCAGCTTGGAGACCACAAAGAGGCTTACCTGAAAACTCTG 1333
Query 1288 TCTCTATACTCCGAGCTTGGCTCTTTGAGCATTTCCTTCATCCATATCCTAAAGAATCAG 1347
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1334 TCTCTATACTTCGAGCTTGGCTCTTTGAGCATTTCCTTCATCCATATCCTAAAGAATCAG 1393
Query 1348 AGAAAATCATGCTTTCAAAGCAGACAGGACTATCGAAAAACCAGGTTGCAAATTGGTTTA 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1394 AGAAAATCATGCTTTCAAAGCAGACAGGACTATCGAAAAACCAGGTTGCAAATTGGTTTA 1453
Query 1408 TTAACGCGAGAGTTCGACTATGGAAACCGATGATCGAAGAGATGTATAAAGAAGAGTTTG 1467
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 1454 TTAACGCGAGAGTTCGACTATGGAAACCAATGATTGAAGAGATGTATAAAGAAGAGTTTG 1513
Query 1468 GAGACTCAGCAGAGTTACTATCTAACTCTAATCAAGACACCAACAAAATGCAGGAAACAT 1527
|||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1514 GAGAATCAGCAGAGTTACTCTCTAACTCTAATCAAGACACCAAAAAAATGCAGGAAACAT 1573
Query 1528 CTCACCTCAAACACGAAGACTCTTCGTCTTCGCAACAACAGAATCAGGGAAACAACAACA 1587
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1574 CTCAGCTCAAACACGAAGACTCTTCGTCTTCGCAACAACAGAATCAGGGAAACAACAACA 1633
Query 1588 ------TCCCATATACATCTGACGCAGAAGAAAACCTCGTCTTCGCAGATCCCAAACCAG 1641
|||||||||||||||| |||||| ||||||| ||||| |||||||| |||||||
Sbjct 1634 ACAACATCCCATATACATCTGATGCAGAACAAAACCTAGTCTTTGCAGATCCTAAACCAG 1693
Query 1642 ACCGTGCTACTACTGGAGATTACGACAGCTTGATGAACTATCATGGGTTTGGTATCGATG 1701
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1694 ACCGTGCTACTACTGGAGATTACGACAGCTTGATGAACTATCATGGGTTTGGTATTGATG 1753
Query 1702 ATTACAATCGATACGTTGGCCTTGGAAACCAACAAGATGGCAGATATTCTAATCCCCATC 1761
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1754 ATTACAATCGTTACGTTGGCCTTGGAAACCAACAAGATGGCAGATATTCTAATCCCCATC 1813
Query 1762 AATTACACGACTTTGTTGTCTAAAAGGTTTCTGAGCTTTTCACAAGCTTAAGAACTGGCA 1821
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 1814 AATTACACGACTTTGTTGTCTAAAAGATTCCTGAGCTTTTCACAAGCTTAAGAACTGGCA 1873
Query 1822 ATGC--GTTGGTTGGGG-AGTTTGATTCTTGAAGCGCAAGAAAATGCGCTCTTGGCATTT 1878
|||| |||| |||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1874 ATGCCAGTTGATTGGGGGAGTATGATTCTTGAAGCGCAAGAAAATGCGCTCTTGGCATTT 1933
Query 1879 Ttatagataggggttatataaatatacaatatgtatatctgtaatatttgttgtggcata 1938
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 1934 TTATAGATAGGGGTTATACAAATAT-------GTATATCTGTAATATTTGTTGTGGCATA 1986
Query 1939 tataAAGGATAGATTTTGTGAAAACTGTAGGTGTTAGACTTTACATTTGTATATGAAAAT 1998
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1987 TATAAAGGATAGATTTTGTGAAAACTTTAGGTGTTAGACTTTACATTTGTATATGAAAAT 2046
Query 1999 TGAGCCTTATGTACACTTTGGTAAGCCAATATTGTAACGTTTT-GTGTA-AACTCTTCAA 2056
||||| || |||||||||||||||||| ||||||||| ||||| || || || ||||||
Sbjct 2047 TGAGCTTTGTGTACACTTTGGTAAGCCGATATTGTAATGTTTTTGTTTATAA-TCTTCAT 2105
Query 2057 GGTGGTATAAACAATACTTTCAAGTGTG 2084
| |||||||||||||||||| |||||||
Sbjct 2106 GATGGTATAAACAATACTTTTAAGTGTG 2133
> AT1G19700.1 | Symbols: BEL10, BLH10 | BEL1-like homeodomain 10
| chr1:6809744-6812657 REVERSE LENGTH=2022
Length=2022
Score = 634 bits (343), Expect = 1e-180
Identities = 716/885 (81%), Gaps = 69/885 (8%)
Strand=Plus/Plus
Query 656 TGGTAATGGT--G-TTGGTTTCTACAACAATTA-CCGT-T-ACGAGACATC---AGGGTT 706
|||||||||| | ||| |||||||||||||| | || | | |||||||| ||||||
Sbjct 617 TGGTAATGGTGGGAATGGCTTCTACAACAATTATCGGTATAATGAGACATCAGGAGGGTT 676
Query 707 TGTGAGTAGTGTTCTGAGATCTCGTTACCTTAAACCAACACAGCAA-TTGCTTGATGAAG 765
| |||| || |||||| | ||||| || |||||||| | ||| || |||||||||||||
Sbjct 677 TATGAGCAGCGTTCTGCGTTCTCGGTATCTTAAACCTGCTCAG-AATTTGCTTGATGAAG 735
Query 766 TTGTTAGTGT-AAGGAAAG-ATTTGA--AATTGGGGAATAAGAAGATGAAGAACGATAA- 820
| |||||||| || ||||| | | | || ||||||| ||||||||| | || | |||
Sbjct 736 TGGTTAGTGTCAA-GAAAGAACTAAACCAAATGGGGAAGAAGAAGATG-A-AA-GTTAAT 791
Query 821 -AGGTCAAGACT--TTC-AA--A-AT-G--GGTCGA-GTGATAACATTA-CAGA-AGATG 867
| | || | | ||| || | || | || || ||| | | ||| | || |||
Sbjct 792 GACTTTAACAGTGGTTCTAAGGAGATAGAAGGAGGAGGTGGTGA-GTTATC-GAGTGATT 849
Query 868 AGAAAT-CTCAATCGCA-GGAGTTATCT-C-CTTCAGAACGTCAGGAGCTACAGAGCAAG 923
| ||| ||||| | ||||||||| | || |||||| | ||||| |||| ||||
Sbjct 850 CG-AATGGGAAATCG-ATTGAGTTATCTACAATT--GAACGTGAAGAGCTTCAGAACAAG 905
Query 924 AAGAGCAAGCTCTTAACAATGGTGGATGAGGTAGATAAAAGGTATAACCAATACCACCAT 983
|||| |||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct 906 AAGAACAAGCTTTTAACAATGGTTGATGAGGTAGATAAAAGATATAACCAATATTACCAT 965
Query 984 CAAATGGAAGCTTTAGCATCGTC-TTTCGAGATGGTAACAGGTCTTGGAGCAGCTAAGCC 1042
||||||||||| ||||| || || ||| ||||| ||| |||| |||||| ||||||||||
Sbjct 966 CAAATGGAAGCATTAGCTTCATCATTT-GAGATAGTAGCAGGACTTGGATCAGCTAAGCC 1024
Query 1043 TTACACATCGGTCGCTCTGAATAGAATCTCTCGCCATTTCCGCTGCT-TGCGCGATGCGA 1101
||||||||| || ||||| || ||||||||||||||||| || |||| | ||||| || |
Sbjct 1025 TTACACATCAGTTGCTCTCAACAGAATCTCTCGCCATTTTCG-TGCTCTTCGCGACGCAA 1083
Query 1102 TAAAAGAGCAGATTCAGGTAATCAGAGGGAAGCTTGGGGAG--A-GA-GAGACTTC--T- 1154
|||| || || |||||| | | |||| || ||||||||| | || |||| || |
Sbjct 1084 TAAAGGAACAAATTCAGATTGTTAGAGAAAAACTTGGGGAGAAAGGAGGAGA-GTCGTTG 1142
Query 1155 GAT--G-AACAAGGAGAGAGGATACC--GCGTCTGAGGTATTTAGATCAACGGTTGAGAC 1209
||| | ||||||||||||||||||| | || |||||||||||||||||||||||||||
Sbjct 1143 GATGAGCAACAAGGAGAGAGGATACCAAG-GT-TGAGGTATTTAGATCAACGGTTGAGAC 1200
Query 1210 AACAGAGAGCTTTGCATCAACAGCTTGGAATGGTTAGACCAGCTTGGAGACCACAAAGAG 1269
| || |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||
Sbjct 1201 AGCAAAGAGCTTTGCATCAACAGCTTGGAATGGTTCGACCTGCTTGGAGACCTCAAAGAG 1260
Query 1270 G-CTTACCTGAAAACTCTGTCTCTATACTCCGAGCTTGGCTCTTTGAGCATTTCCTTCAT 1328
| ||| |||||||||||||||||| | || || |||||||||||||| ||||||||||||
Sbjct 1261 GTCTT-CCTGAAAACTCTGTCTCTGTTCTTCGCGCTTGGCTCTTTGAACATTTCCTTCAT 1319
Query 1329 CCATATCCTAAAGAATCAGAGAAAATCATGCTTTCAAAGCAGACAGGACTATCGAAA-AA 1387
|||||||| |||||||| ||||||||||||||| |||||||||||||| | || ||| ||
Sbjct 1320 CCATATCCGAAAGAATCTGAGAAAATCATGCTTGCAAAGCAGACAGGATTGTC-AAAGAA 1378
Query 1388 CCAGGTTGCAAATTGGTTTATTAACGCGAGAGTTCGACTATGGAAACCGATGATCGAAGA 1447
||||||||| |||||||| || |||||||||||||| || ||||||||||||||||||||
Sbjct 1379 CCAGGTTGCTAATTGGTTCATAAACGCGAGAGTTCGTCTGTGGAAACCGATGATCGAAGA 1438
Query 1448 GATGTATAAAGAAGAGTTTGGAGACTCAG-CAGAGTTACTA-TCT 1490
|||||||||||||||||||| || | | | ||||||||| |||
Sbjct 1439 AATGTATAAAGAAGAGTTTGGTGA-TGAATCTGAGTTACTAATCT 1482
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 103312721610
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5