BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476800 Length=1749 Score E Sequences producing significant alignments: (Bits) Value AT1G76430.1 | Symbols: PHT1;9 | phosphate transporter 1;9 | chr... 2427 0.0 AT1G20860.1 | Symbols: PHT1;8 | phosphate transporter 1;8 | chr... 889 0.0 > AT1G76430.1 | Symbols: PHT1;9 | phosphate transporter 1;9 | chr1:28678935-28681995 REVERSE LENGTH=1900 Length=1900 Score = 2427 bits (1314), Expect = 0.0 Identities = 1554/1669 (93%), Gaps = 19/1669 (1%) Strand=Plus/Plus Query 28 TATTGTTCTCATTTTTCTGTATCTTGAAAAAATCCTT---AAATCGACGAAACGATGCCG 84 ||||||||||| || || ||||||||||||||| ||| |||||||||||||||||||| Sbjct 69 TATTGTTCTCA-TTCTCCGTATCTTGAAAAAATTCTTAAAAAATCGACGAAACGATGCCG 127 Query 85 GCGTTAAGAGTGTTATCGGCTTTAGATGCGGCGAGGATACAGTGGTACCATTTCAAAGCC 144 | |||||| | |||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct 128 GAGTTAAGTTTATTATCGGCGTTAGACGCAGCGAGGATACAGTGGTACCATTTCAAAGCG 187 Query 145 ATAATAGTCGCCGGCATGGGACTTTTCACCGACGCTTACGATCTTTTCTGTATAGCTCCG 204 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 188 ATAATAGTCGCCGGAATGGGACTTTTCACCGACGCATACGATCTTTTCTGTATAGCTCCG 247 Query 205 ATCATGAAGATGATAAGTCAAATCTATTACCACAAAGACTCAATCGGAACCGCTATTCTC 264 |||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 248 ATCATGAAAATGATAAGTCAAATATATTACCACAAAGACTCAATCGGAACCGCTCTTCTC 307 Query 265 TCAACTTCTTACGCAATCGCTCTTCTTGGCACCGCTTTAGGTCAGCTCATCTTTGGTTAC 324 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 308 TCAACTTCTTACGCAATCGCTCTTCTTGGCACCGCGTTAGGTCAGCTCATCTTTGGTTAC 367 Query 325 TTAGGCGACCGAATCGGACGTCGTAAAGTCTATGGACTTTGTCTCTTAATCATGATTTTT 384 ||||| |||||| |||||||||||||||||||||||||| ||||||| |||||| | ||| Sbjct 368 TTAGGTGACCGAGTCGGACGTCGTAAAGTCTATGGACTTAGTCTCTTGATCATGGTGTTT 427 Query 385 AGCTCTTTTGGTTGTGGCTTCTCTGTTTGCACGACTCGGCGTTCTTGCGTTTTGGTTAGT 444 ||||| |||||||||||||||||||||||||||||||| |||||||| ||| |||||||| Sbjct 428 AGCTCCTTTGGTTGTGGCTTCTCTGTTTGCACGACTCGACGTTCTTGTGTTATGGTTAGT 487 Query 445 CTTGGATTCTTTAGATTCGTTCTTGGACTTGGAATCGGTGGAGATTATCCTCTTTCCGCC 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 488 CTTGGATTCTTTAGATTCGTTCTTGGACTTGGAATCGGTGGAGATTATCCTCTTTCGGCC 547 Query 505 ACGATTATGTCGGAGTTCGCTAATAAAAGGACGCGTGGAGCTTTTATAGCTGCCGTGTTC 564 ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| Sbjct 548 ACGATTATGTCGGAGTTTGCTAACAAAAGGACGCGTGGAGCTTTTATCGCTGCCGTGTTC 607 Query 565 TCGATGCAAGGGTTAGGGATTTTGATGAGCTCTGCTGTGACTATGGTTGTGTG-TGTGGC 623 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 608 TCGATGCAAGGGTTAGGGATTTTGATGAGCTCTGCTGTGACTATGGTTGTGTGCT-TGGC 666 Query 624 GTTTAAGAACGCAGCCGGAGAGGGGAGCTT-GGAGAAGACGAACGTGGCGGGGTTAGAAA 682 ||| |||||||| | | ||||||||| || ||||||||||||||||||||||||||| | Sbjct 667 GTTCAAGAACGCTG--G-AGAGGGGAG-TTCGGAGAAGACGAACGTGGCGGGGTTAGAGA 722 Query 683 CTGTGGCTCCCCCGGAATCGGATATAGCGTGGAGGTTGATTCTTATGATCGGAGCTCTTC 742 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 723 CTTTGGCTCCGCCGGAATCGGATATAGCGTGGAGGTTGATTCTTATGATCGGAGCTCTTC 782 Query 743 CCGCTGCGTTAACGTTTTACTGGCGAATGCTCATGCCTGAAACCGCCAGATACACAGCAT 802 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 783 CCGCCGCGTTAACGTTTTACTGGCGAATGCTCATGCCTGAAACCGCCAGATACACAGCAT 842 Query 803 TGGTGGAGAACAATGTAGTCGAAGCAGCAAAAGACATGCAAAGAGTCATGACCGTATCCA 862 |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | Sbjct 843 TGGTTGAGAACAATGTAGTCCAAGCAGCAAAAGACATGCAAAGAGTCATGTCCGTATCAA 902 Query 863 TGATATCTCAAATAGCCGAAGATTCATCATCGGAGCTAGAACAACCACCGACTTCCTCCT 922 |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 903 TGATATCTCAAATAACCGAAGATTCATCATCGGAGCTAGAACAACCACCGTCTTCTTCCT 962 Query 923 -A--CAAACTCTTCTCTCGCCGTTTCCTCAACCTTCACGGCCGAGACCTCTTCGCAGCCT 979 | |||||||||||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct 963 CATACAAACTCTTCTCTCGCCGTTTCCTCAGTCTCCACGGTCGAGACCTCTTCGCAGCCT 1022 Query 980 CAGCTAATTGGTTCCTAGTCGACGTCGTCTTCTATACAAGCAACCTCCTCCTCTCTCAAA 1039 |||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct 1023 CAGCCAATTGGTTCCTAGTGGACGTCGTCTTCTATACAAGCAATCTCCTTCTCTCTCAAA 1082 Query 1040 TCTTCAATTTATCCAACAAACCTCC-CAATTCCACAAACGTCTACGAGTCCGCCTTCGAA 1098 |||| || || ||||||||||| || ||| ||||||||||||||||| || ||||| ||| Sbjct 1083 TCTTTAACTTCTCCAACAAACC-CCTCAACTCCACAAACGTCTACGACTCTGCCTTTGAA 1141 Query 1099 GTATCTAAGCTCGCAGCCATTGTAGCCGCTTGCTCCACCATCCCCGGTTACTGGTTCACC 1158 ||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1142 GTAGCTAAGCTTGCAGCCATTGTAGCCGCTTGCTCCACCATCCCTGGTTACTGGTTCACG 1201 Query 1159 GTTTATTTCATCGATAAAATCGGTCGAGTCAAGATTCAGATGATGGGTTTTTTCCTTATG 1218 || ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 1202 GTCTATTTCATCGATAAAATCGGTAGAGTCAAGATTCAGATGATGGGGTTTTTCCTTATG 1261 Query 1219 GCCGTTGTTTACTTAGTCGCTGGGATTCCATACAGTTGGTATTGGTCTAAGCATGAGAAG 1278 || || ||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 1262 GCGGTCGTTTACTTAGTCGCTGGGATTCCGTATAGTTGGTATTGGTCTAAGCATGAGAAG 1321 Query 1279 ACTAAAAAAGGCTTTATGGTTCTCTACGGATTGATTTTCTTCTTTAGCAACTTTGGTCCT 1338 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1322 ACTAATAAAGGCTTTATGGTTCTCTACGGATTGATTTTCTTCTTTAGCAACTTTGGCCCT 1381 Query 1339 AACACGACAACGTTTATTATCCCGGCGGAGCTTTTTCCGGCAAGGTTTAGGTCCACATGT 1398 |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct 1382 AACACGACGACGTTTATCATCCCGGCGGAGCTTTTTCCGGCTAGGTTTAGGTCCACGTGT 1441 Query 1399 CACGGGATATCTGGAGCTGCCGGGAAGTTTGGTGCGATTGTTGGCACTGTTGGTTTCTTG 1458 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1442 CACGGGATATCTGGAGCTGCAGGGAAGTTTGGTGCGATTGTTGGCACTGTCGGTTTCTTG 1501 Query 1459 TGGGCCACGAAACACCATGAAGAGGACGGTTTTCCAGACGTGAAACGTGTGAGAATCGCG 1518 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1502 TGGGCCACGAGACACCATGAAGAGGACGGTTTTCCAGATGTGAAACGTGTGAGAATCGCG 1561 Query 1519 TTTTTGATCCTTGGCGGCGTTTGTATAGCTGGAATGATCGTTACGTATTTCTTCACTCGT 1578 |||||||||||||||||||||||||| || ||||||||||| |||||||| ||||| ||| Sbjct 1562 TTTTTGATCCTTGGCGGCGTTTGTATCGCGGGAATGATCGTAACGTATTTGTTCACGCGT 1621 Query 1579 GAAACGATGGGAAGATCATTAGAAGAGAACGAAGACAAGATTGGTACAACGTCAGGA--- 1635 ||||| ||||||||||| |||||||||||||||||| |||||| | | ||||||| | Sbjct 1622 GAAACTATGGGAAGATCGTTAGAAGAGAACGAAGACGAGATTGTTTCCACGTCAGCAGGG 1681 Query 1636 TCGTCTTCTGCGAATGAGTTACTTCCGAGACAATACTGATTTCGAGATC 1684 |||||| |||||||||||||||||| ||||||||||| ||||| ||||| Sbjct 1682 TCGTCTCCTGCGAATGAGTTACTTCGGAGACAATACTAATTTCAAGATC 1730 > AT1G20860.1 | Symbols: PHT1;8 | phosphate transporter 1;8 | chr1:7254007-7258677 REVERSE LENGTH=1605 Length=1605 Score = 889 bits (481), Expect = 0.0 Identities = 1195/1528 (78%), Gaps = 95/1528 (6%) Strand=Plus/Plus Query 123 ACAGTGGTACCATTTCAAAGCCATAATAGTCGCCGGCATGGGACTTTTCACCGACGCTTA 182 ||| ||||||||||||||||| || ||||| || || ||||| || ||||||||||| || Sbjct 42 ACAATGGTACCATTTCAAAGCGATCATAGTAGCGGGAATGGGTCTATTCACCGACGCATA 101 Query 183 CGATCTTTTCTGTATAGCTCCGATCATGAAGATGATAAGTCAAATCTATTACCACAAAGA 242 |||||||||||| ||||| ||| ||||||| ||||| ||||| | |||||| || || Sbjct 102 CGATCTTTTCTGCATAGCACCGGTCATGAAAATGATTAGTCATGTTTATTACAACGGTGA 161 Query 243 CTCAATCGGAAC-C-GCTATTCTCTCAACTTCTTACGCAATCGCTCTT-CTTGGCACCGC 299 ||||||| ||| | || |||| |||||||||||||| |||||| || || ||||| || Sbjct 162 CTCAATC--AACACAGCCGTTCTTTCAACTTCTTACGCCATCGCT-TTACTCGGCACAGC 218 Query 300 TTTAGGTCAGCTCA-TCTTTGGTTACTTAGGCGACCGAATCGGACGTCGTAAAGTCTATG 358 ||||| || | |||| |||||| | || |||||| |||| ||||| |||||| | Sbjct 219 CACGGGTCAACT-AGTCTTCGGTTACCTCGGTGACCGAGTCGGTCGTCGCCGAGTCTACG 277 Query 359 GACTTTGTCT-CTTAATCATGATTTTTAGCTCTTTTGGTTGTGGCTTCTCTGTTTGCACG 417 |||||||| | || || ||||| ||||||| |||||||||||||| || || ||||| Sbjct 278 GACTTTGTTTGATT-ATTATGATCCTTAGCTCCTTTGGTTGTGGCTTTTCCGTGTGCACC 336 Query 418 ACTCGGCGTTCTTGCGTTTTGGTTAGTCTTGGATTCTTT-AGATTCGTTCTTGGACTT-G 475 ||||| || ||||| ||| ||||||| || || || ||| | ||| ||||||| || | Sbjct 337 ACTCGTCGGTCTTGTGTTATGGTTAGCCTCGG-TTTTTTCCGGTTCTTTCTTGG-TTTAG 394 Query 476 GAATCGGTGGAGATTATCCTCTTTCCGCCACGATTATGTCGGAGTTCGCTAATAAAAGGA 535 | |||||||| ||||| || || || || || |||||||||||||| |||||||| |||| Sbjct 395 GTATCGGTGGTGATTACCCGCTCTCGGCTACCATTATGTCGGAGTTTGCTAATAAGAGGA 454 Query 536 CGCGTGGAGCTTTTATAGCTGCCGTGTTCTCGATGCAAGGGTTAGGGATTTTGATGAGCT 595 | ||||| || ||||| ||||| ||||| |||||||||||||| ||||||||| | |||| Sbjct 455 CACGTGGCGCGTTTATCGCTGCGGTGTTTTCGATGCAAGGGTTGGGGATTTTGGTTAGCT 514 Query 596 CTGCTGTGACTATGGTTGTGTGTGTGGCGTTTAAGAACGCAGCCGGAGAGGGGAGCTTGG 655 |||| ||||| |||| ||| || |||||||||||| | | || | | || | | |||| Sbjct 515 CTGCCGTGACCATGGCTGTTTGCGTGGCGTTTAAG-A-GAAG--TG-GCGGTG-GTTTGG 568 Query 656 AGAAGACGAACGTGGCGGGGTTAGAAACTGTGGCTCCCCCGGAATCGGA-TATAGCGTGG 714 || | | | | || | | | |||||| ||||| | || | | || ||| Sbjct 569 AG--G-TGGA--T-GC---G---G---C---GGCTCCGACGGAAGCTGACT-TGGCCTGG 609 Query 715 AG-GTTGATTCTTATGATCGGAGCTCTTCCCGCTGCGTTAACGTTTTACTGGCGAATGCT 773 || || || ||||||||||| |||||||| ||||| || ||||| || ||||||||| | Sbjct 610 AGACTT-ATACTTATGATCGGTGCTCTTCCTGCTGCATTGACGTTCTATTGGCGAATGTT 668 Query 774 CATGCCTGAAACCGCCAGATACACAGCA-TTGGTGGAGAACAATGTAGTCGAAGCAGCAA 832 |||||||||||||| |||||||||||| || || || |||||| | ||| ||||||||| Sbjct 669 GATGCCTGAAACCGCAAGATACACAGCACTT-GTAGAAAACAATATCGTCCAAGCAGCAA 727 Query 833 AAGACATGCAAAGAGTCATGACC-GTATCCATGATATCTCAAATAGCCGAAGATTCATC- 890 |||||||||||||||||||| | | ||| | ||||||| | | |||| || | Sbjct 728 AAGACATGCAAAGAGTCATGTCAAG-ATC--TCATATCTCCGA---C-GAAGC--CA-CG 777 Query 891 ATCGGAGCTAGAACAACCACCGACTTC-C-T-CCTACAAACTCTTCTCTCGCCGTTTCCT 947 | |||| | | | || ||| | | | | |||||||||||||||| ||| | ||| | Sbjct 778 A-CGGATCCACCTCCTCCTCCGCCGCCACCTTCCTACAAACTCTTCTCCCGCTGCTTCTT 836 Query 948 CAACCTTCACGGCCGAGACCTCTTCGCAGCCTCAGCTAATTGGTTCCTAGTCGACGTCGT 1007 | ||| || || || ||||||||||||||||| ||||||||||||||| ||| | || Sbjct 837 CCGCCTCCATGGTCGCGACCTCTTCGCAGCCTCCTTTAATTGGTTCCTAGTAGACATTGT 896 Query 1008 CTTCTATACAAGCAACCTCCTCCTCTCTCAAATCTTCAAT--TTA-TCCAACAAACCTCC 1064 |||||| ||||||||||||||||| || || ||||||| | ||| ||||| |||||| | Sbjct 897 CTTCTACACAAGCAACCTCCTCCTGTCCCATATCTTCAGTCATTACTCCAAGAAACCTTC 956 Query 1065 CAATTCCACAAA-CGTCTACGA-GTCCGCCTTCGAAGTATCT-AAGCTCGCAGCCATTGT 1121 || | | | ||| ||||||||| | | ||||| ||||| | || | | |||||| | Sbjct 957 CACTGC-AGAAAACGTCTACGACG-CAGCCTTTGAAGTGGCGGAAT-TAGGAGCCATCAT 1013 Query 1122 AGCCGCTTGCTCCACCATCCCCGGTTACTGGTTCACCGTTTATTTCATCGATAAAATCGG 1181 || |||||||||||||| |||||||| |||||||| ||||| |||||||| || || || Sbjct 1014 CGCTGCTTGCTCCACCATTCCCGGTTATTGGTTCACAGTTTACTTCATCGACAAGATAGG 1073 Query 1182 TCGAGTCAAGATTCAGATGATGGGTTTTTTCCTT-ATGGCCGTTGTTTACTTAGTCGCTG 1240 ||| ||||| || ||||| ||||| |||||| || ||||||||| |||| |||||||||| Sbjct 1074 TCGTGTCAAAATCCAGATTATGGGGTTTTTC-TTCATGGCCGTTATTTATTTAGTCGCTG 1132 Query 1241 GGATTCCATACAGTTGGTATTGGTCTAAGCATGAGAAGACTAAAAAAGGCTTTATGGTTC 1300 | ||||| ||||||||||||||||| ||||| ||| | | ||| |||||||| ||||||| Sbjct 1133 GTATTCCGTACAGTTGGTATTGGTCAAAGCACGAGCATAATAATAAAGGCTTCATGGTTC 1192 Query 1301 TCTACGGATTGATTTTCTTCTTTAGCAACTTTGGTCCTAACACGACAACGTTTATTAT-C 1359 ||||||| ||| ||||||||||| |||| |||||||| ||||| ||||| |||||||| | Sbjct 1193 TCTACGGTTTGGTTTTCTTCTTTTGCAATTTTGGTCCCAACACTACAACTTTTATTATTC 1252 Query 1360 CCGGCGGAGCTTTTTCCGGCAAGGTTTAGGTCCACATGTCACGGGATATCTGGAGCTGCC 1419 ||| | |||| ||| ||||| ||||||||||| || ||||||||||| ||||| || || Sbjct 1253 CCG-CAGAGCATTTCCCGGCTAGGTTTAGGTCTACTTGTCACGGGATCTCTGGTGCCGC- 1310 Query 1420 GGG-AAGTTTGGTGCGATTGTTGGCACTGTTGGTTTCTTGTGGGCCAC---GAA-AC--A 1472 ||| ||| |||| || ||||| ||||||||||| ||||||||||| || ||| | | Sbjct 1311 GGGTAAGCTTGGGGCTATTGTGGGCACTGTTGGGTTCTTGTGGGCTACCAAGAAGATGGA 1370 Query 1473 C--C-ATGA-AGAGGACG-G-TTT-TCCAGACGTGAAAC-GTGTGAGAATCGCGTTT-TT 1523 | |||| | | || | ||| ||| || || |||| || ||||||| || ||| || Sbjct 1371 AAGCGATGATAAAA-ACCAGATTTATCCCGAAGT-AAACCGTATGAGAATTGC-TTTCTT 1427 Query 1524 GATCCTTGGCGGCGTTTGTATAGCTGGAATGATCGTTACGTATTTCTTCACTCGTG-AAA 1582 ||| ||||| |||||||| || |||||||| | || |||||||||||||| | | ||| Sbjct 1428 GATTCTTGGTGGCGTTTGCATTGCTGGAATCTTGGTGACGTATTTCTTCAC-CAAGGAAA 1486 Query 1583 CGATGGGAAGATCATTAGAAGAGAACGA 1610 | ||||||||||| ||||| |||||||| Sbjct 1487 CTATGGGAAGATCGTTAGAGGAGAACGA 1514 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 86495539035 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5