BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476828 Length=1189 Score E Sequences producing significant alignments: (Bits) Value AT1G76690.1 | Symbols: OPR2, ATOPR2 | 12-oxophytodienoate reduc... 1664 0.0 AT1G76680.2 | Symbols: OPR1 | 12-oxophytodienoate reductase 1 |... 957 0.0 > AT1G76690.1 | Symbols: OPR2, ATOPR2 | 12-oxophytodienoate reductase 2 | chr1:28778890-28780483 FORWARD LENGTH=1339 Length=1339 Score = 1664 bits (901), Expect = 0.0 Identities = 1101/1197 (92%), Gaps = 15/1197 (1%) Strand=Plus/Plus Query 1 GAAATGGAAAACGCAGTAGCAAAACAGAGTATACCTCTTCTCACTCCC-TATAAGATGGG 59 ||||||| |||||||| ||||||||||||| | ||||||||||| ||| ||||||||||| Sbjct 90 GAAATGGTAAACGCAGAAGCAAAACAGAGTGTCCCTCTTCTCAC-CCCTTATAAGATGGG 148 Query 60 AAGATTCAATCTTTCCCATAGGGTTGTTCTAGCACCATTGACGAGACAGAGATCGTACGG 119 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 149 AAGATTCAATCTTTCTCATAGGGTTGTTCTAGCACCATTGACGAGACAGAAATCGTACGG 208 Query 120 AAACGTTCCTCAGCCTCACGCTGCCGTATATTACTCTCAGAGAACGACTCAAGGAGGTTT 179 || ||||||||||||||||||| | | |||||||||||||||||| | | |||||||| Sbjct 209 AAGCGTTCCTCAGCCTCACGCTATCTTGTATTACTCTCAGAGAACGTCACCGGGAGGTTT 268 Query 180 TCTCATCACTGAAGCCACCGGAGTTTCAGATACAGCTCAAGGCTATGAAGATACTCCTGG 239 ||||||| ||||||||||||| |||||||||||||||||||| ||| |||||| ||||| Sbjct 269 TCTCATCGCTGAAGCCACCGGGGTTTCAGATACAGCTCAAGGGTATCCAGATACACCTGG 328 Query 240 GATATGGACTAAAGAGCATGTGGAGGCATGGAAGCCAATCGTTGATGCTGTTCATGCCAA 299 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 329 GATATGGACTAAAGAGCATGTGGAGGCATGGAAGCCAATCGTTGATGCTGTACATGCCAA 388 Query 300 AGGTGGTATCTTCTTCTGTCAGATCTGGCATGTTGGCCGTGTTTCTAATCGCGGGTTTCA 359 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 389 AGGTGGTATCTTCTTCTGTCAGATCTGGCATGTTGGCCGCGTTTCTAATCGCGGTTTTCA 448 Query 360 GCCAA--ATGGACAAGCTCCTATCTCTTGTTCGGATAAGCCA-TTGATGCCTCAAATCCG 416 ||||| | || |||||||||||||||||| ||| |||||| || ||||||||||| || Sbjct 449 GCCAAGGA-GG-CAAGCTCCTATCTCTTGTACGGGGAAGCCAATT-ATGCCTCAAATGCG 505 Query 417 CT-CTAATGGCATTGACGAAGC-CATGTTTACTCCTCCAAGACGGCTGAGTGTCGAAGAA 474 | ||||||||||||| ||||| | ||||| ||||||||||| || ||| |||||||| Sbjct 506 -TGCTAATGGCATTGATGAAGCTCGC-TTTACCCCTCCAAGACGTCTAAGTATCGAAGAA 563 Query 475 ATCCCCGGCATTGTCAACGATTTTAGGCTTGCTGCAAGAAATGCTATGGAAGCTGGCTTT 534 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 564 ATCCCCGGCATTGTCAATGATTTTAGGCTTGCTGCAAGAAATGCTATGGAAGCTGGTTTT 623 Query 535 GACGGAGTTGAGATTCATGGAGCTCATGGCTATCTGATTGATCAGTTCATGAAGGATACA 594 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 624 GATGGAGTTGAGATTCATGGAGCTCATGGCTATCTGATTGATCAGTTCATGAAGGACAAA 683 Query 595 GTGAATGATAGAACTGATGAATACGGTGGATCATTGCAAAACCGTTGCAAATTTGCTTTA 654 |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 684 GTGAATGACAGAACTGATGAATATGGTGGATCATTGCAAAACCGTTGCAAATTTGCTCTG 743 Query 655 GAAATAGTCGATGCAGTGGCCAAGGAGATCGGGCCAGACCGTGTTGGAATCAGGCTCTCT 714 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 744 GAAGTAGTCGATGCAGTGGCTAAGGAGATCGGGCCAGACCGTGTTGGAATCAGGCTCTCT 803 Query 715 CCGTTTGCAGACTACATGGAATCCGGAGACACTAATCCAGGAGCATTGGGGCTTTACATG 774 |||||||||||||| ||||||||||||||||||||||||| |||||| ||||| |||||| Sbjct 804 CCGTTTGCAGACTATATGGAATCCGGAGACACTAATCCAGAAGCATTAGGGCTGTACATG 863 Query 775 GCGGAATCTCTGAACAAATACGGAATCCTCTACTGTCATGTGATTGAAGCCAGAATGAAA 834 | |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| Sbjct 864 GTGGAATCTCTGAACAAATATGGAATCCTCTACTGTCATATGATTGAACCCAGAATGAAA 923 Query 835 ACAATGGGGGAAATATCAGCTTGTCCTCACACACTTATGCCGATGAGGAAAGCCTTTAAG 894 ||| |||| |||||| |||| ||| |||||||||| ||||| |||||| ||||||||||| Sbjct 924 ACAGTGGGAGAAATAGCAGCGTGTTCTCACACACTAATGCCAATGAGGGAAGCCTTTAAG 983 Query 895 GGGACTTTCATCTCTGCAGGAGGTTTCACGAGAGAAGATGGGAATGAGGCCGTGGCAAAG 954 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 984 GGGACTTTCATCTCTGCAGGAGGTTTCACGAGGGAAGATGGGAATGAGGCCGTGGCAAAG 1043 Query 955 GGACGGACCGATCTGGTGGCTTACGGTCGATGGTTTCTGGCCAATCCGGACCTGCCAAAG 1014 ||||| || ||||| |||||||| |||||||||||||| ||||| || |||||||||||| Sbjct 1044 GGACGAACTGATCTTGTGGCTTATGGTCGATGGTTTCTAGCCAACCCAGACCTGCCAAAG 1103 Query 1015 AGGTTCCAAGTGGATGCACCGCTGAATAAATACGATAGACCAACGTTTTACACTTCTGAT 1074 |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 1104 CGGTTCCAACTGGATGCACCGCTGAATAAATACAATAGGTCAACGTTTTACACTTCTGAT 1163 Query 1075 CCTGTCGTGGGTTACACTGATTACCCTTTCCTCGAATCAACAGCTTAAAAT--TGTTATC 1132 ||||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||| Sbjct 1164 CCTGTCGTGGGTTACACCGATTACCCTTCCCTTGAATCAACAGCTTAAAATCGTGTTATC 1223 Query 1133 AATAATGTAATGTGTTTCCCTTATGATGTAATAAGTTTCTGGCTTTTTATTTATACT 1189 | ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 1224 AGTAATGTAATGTGTTTCCCTAATGATGTAATAAGTTTCTGGCTTTTG-TTTATACT 1279 > AT1G76680.2 | Symbols: OPR1 | 12-oxophytodienoate reductase 1 | chr1:28776861-28778467 FORWARD LENGTH=1511 Length=1511 Score = 957 bits (518), Expect = 0.0 Identities = 620/668 (93%), Gaps = 11/668 (2%) Strand=Plus/Plus Query 532 TTTGACGGAGTTGAGATTCATGGAGCTCATGGCTATCTGATTGATCAGTTCATGAAGGAT 591 ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct 725 TTTGATGGAGTTGAGATTCATGGAGCTAATGGCTATCTGATTGACCAGTTCATGAAGGAT 784 Query 592 ACAGTGAATGATAGAACTGATGAATACGGTGGATCATTGCAAAACCGTTGCAAATTTGCT 651 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 785 ACGGTGAATGATAGAACTGATGAATACGGTGGATCATTGCAAAACCGTTGCAAATTTCCT 844 Query 652 TTAGAAATAGTCGATGCAGTGGCCAAGGAGATCGGGCCAGACCGTGTTGGAATCAGGCTC 711 ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct 845 CTAGAAATAGTCGATGCAGTTGCTAAGGAGATCGGACCAGACCGTGTTGGAATCAGGCTC 904 Query 712 TCTCCGTTTGCAGACTACATGGAATCCGGAGACACTAATCCAGGAGCATTGGGGCTTTAC 771 ||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 905 TCTCCATTTGCTGACTACATGGAATCTGGAGACACTAATCCAGGAGCATTAGGGCTTTAT 964 Query 772 ATGGCGGAATCTCTGAACAAATACGGAATCCTCTACTGTCATGTGATTGAAGCCAGAATG 831 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 965 ATGGCGGAATCTTTGAACAAATACGGAATCCTCTACTGTCATGTGATTGAAGCGAGAATG 1024 Query 832 AAAACAATGGGGGAAATATCA-GCTTGTCCTCACACACTTATGCCGATGAGGAAAGCCTT 890 ||||||||||| ||| || || ||||||||||||||||| ||||||||||||||||| || Sbjct 1025 AAAACAATGGGAGAAGTA-CATGCTTGTCCTCACACACTAATGCCGATGAGGAAAGCGTT 1083 Query 891 TAAGGGGACTTTCATCTCTGCAGGAGGTTTCACGAGAGAAGATGGGAATGAGGCCGTGGC 950 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| | Sbjct 1084 TAAGGGGACTTTTATCTCCGCAGGAGGTTTCACGAGGGAAGATGGGAATGAGGCTGTGTC 1143 Query 951 AAAGGGACGGACCGATCTGGTGGCTTACGGTCGATGGTTTCTGGCCAATCCGGACCTGCC 1010 ||||||| | || ||| |||||||||| |||||||||||||| ||||| ||||||||||| Sbjct 1144 AAAGGGAAGAACTGATTTGGTGGCTTATGGTCGATGGTTTCTAGCCAACCCGGACCTGCC 1203 Query 1011 AAAGAGGTTCCAAGTGGATGCACCGCTGAATAAATACGATAGACCAACGTTTTACACTTC 1070 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1204 AAAGAGGTTCCAAGTGGATGCACCGCTGAATAAGTACGATAGACCAACGTTTTACACTTC 1263 Query 1071 TGATCCTGTCGTGGGTTACACTGATTACCCTTTCCTCGAATCAACAGCTTAAAATTGTTA 1130 |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1264 TGATCCAGTCGTCGGTTACACCGATTACCCTTTCCTCGAATCAACAGCTTAAAATTGTTA 1323 Query 1131 TCAATAATGTAATGT-GT-T-T--CCCTTAT----GATGTAATAAGTTTCTGGCTTTTTA 1181 ||||||||||||||| || | | ||||||| ||||||||||||||||||||||| | Sbjct 1324 TCAATAATGTAATGTAGTGTGTTTCCCTTATATAAGATGTAATAAGTTTCTGGCTTTTCA 1383 Query 1182 TTTATACT 1189 |||||||| Sbjct 1384 TTTATACT 1391 Score = 852 bits (461), Expect = 0.0 Identities = 509/532 (96%), Gaps = 4/532 (1%) Strand=Plus/Plus Query 1 GAAATGGAAAACGCAGTAGCAAAACAGAGTATACCTCTTCTCACTCCCTATAAGATGGGA 60 ||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 119 GAAATGGAAAACGGAGAAGCAAAACAGAGTGTACCTCTTCTCACTCCCTATAAGATGGGA 178 Query 61 AGATTCAATCTTTCCCATAGGGTTGTTCTAGCACCATTGACGAGACAGAGATCGTACGGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179 AGATTCAATCTTTCCCATAGGGTTGTTCTAGCACCATTGACGAGACAGAGATCGTACGGA 238 Query 121 AACGTTCCTCAGCCTCACGCTGCCGTATATTACTCTCAGAGAACGACTCAAGGAGGTTTT 180 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 239 AACGTTCCTCAGCCTCACGCTGCCATATATTACTCTCAGAGAACGACTCCAGGAGGTTTT 298 Query 181 CTCATCACTGAAGCCACCGGAGTTTCAGATACAGCTCAAGGCTATGAAGATACTCCTGGG 240 ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| Sbjct 299 CTCATCACTGAAGCCACTGGAGTTTCAGATACAGCTCAAGGATATCAAGATACTCCTGGG 358 Query 241 ATATGGACTAAAGAGCATGTGGAGGCATGGAAGCCAATCGTTGATGCTGTTCATGCCAAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 359 ATATGGACTAAAGAGCATGTGGAGGCATGGAAGCCAATCGTTGATGCTGTACATGCCAAA 418 Query 301 GGTGGTATCTTCTTCTGTCAGATCTGGCATGTTGGCCGTGTTTCTAATCGCGGGTTTCAG 360 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct 419 GGTGGTATCTTCTTCTGTCAGATCTGGCATGTTGGCCGCGTTTCTAATAGCGGGTTTCAG 478 Query 361 CCAAATGGACAAGCTCCTATCTCTTGTTCGGATAAGCCATTGATGCCTCAAATCCGCTCT 420 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 479 CCAAATGGAAAAGCTCCTATCTCTTGTTCGGATAAGCCATTGATGCCTCAAATTCGCTCT 538 Query 421 AATGGCATTGACGAAGC-CATGTTTACTCCTCCAAGACGGCT-GAGTGTCGAAGAAATCC 478 |||||||| || ||||| | | ||||| |||||||||||||| | || |||||||||||| Sbjct 539 AATGGCATCGATGAAGCTC-TCTTTACCCCTCCAAGACGGCTTG-GTATCGAAGAAATCC 596 Query 479 CCGGCATTGTCAACGATTTTAGGCTTGCTGCAAGAAATGCTATGGAAGCTGG 530 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 597 CCGGCATTGTCAATGATTTTAGGCTTGCTGCAAGAAATGCTATGGAAGCTGG 648 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58383233835 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5