BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476922
Length=2717
Score E
Sequences producing significant alignments: (Bits) Value
AT1G77580.2 | Symbols: | Plant protein of unknown function (DU... 3707 0.0
AT1G21810.1 | Symbols: | Plant protein of unknown function (DU... 193 1e-47
> AT1G77580.2 | Symbols: | Plant protein of unknown function (DUF869)
| chr1:29144027-29147584 REVERSE LENGTH=2768
Length=2768
Score = 3707 bits (2007), Expect = 0.0
Identities = 2547/2792 (91%), Gaps = 99/2792 (4%)
Strand=Plus/Plus
Query 1 CAAAGAACAAGATAAAGAGAATtctctc-tctctctctctctctctctctaactct-t-t 57
|||| ||||||||||||||||||||||| ||||||||||||||||||||| || || | |
Sbjct 1 CAAAAAACAAGATAAAGAGAATTCTCTCTTCTCTCTCTCTCTCTCTCTCTCACGCTATAT 60
Query 58 ctctGCCTTGTCGCTGTTAAT-AATCGTAATAGTGTTTCAG--AG-A-CAGTAGAAGAAG 112
||||||||||||||||||||| ||||||||||||||||||| || | || ||||||||
Sbjct 61 CTCTGCCTTGTCGCTGTTAATAAATCGTAATAGTGTTTCAGACAGTAGTAGAAGAAGAAG 120
Query 113 AAAGCTTCTTCC--ttt--tt-ttt--t-G-T-A------------TCCATTGGGGCATT 150
|||||||||||| ||| || ||| | | | | ||||||||||||||
Sbjct 121 AAAGCTTCTTCCTTTTTGCTTGTTTAATCGCTGATTTTTTTTTGTTTCCATTGGGGCATT 180
Query 151 TTCGGATCTCTAAGTTCTTACCA-AAAGT-CTC-TCTCATTCAGATCAT-TGACTGTTAT 206
|| ||||||| |||||||| || | ||| | | | || ||||| | |||||||||
Sbjct 181 TTGGGATCTCAAAGTTCTT--CATACAGTCCCCAAC-CA-AAAGATCCTGAGACTGTTAT 236
Query 207 GTGCTGATTGTGATCTTGGAAGCTAGAAATGGAGGAACGGAAGAGAGAATCATCTGAGAG 266
||||||||||||||||||||| ||| |||||||| || ||||||||||||||||||||||
Sbjct 237 GTGCTGATTGTGATCTTGGAAACTATAAATGGAGAAAAGGAAGAGAGAATCATCTGAGAG 296
Query 267 AAGCTTTGGTGAATCAGAAGAGTCTGTGTCTTCACTATCCGAGAAGAAGGATTCTGAAAT 326
||||||||||||||| |||||||||||||||||||| | | ||||||||||||||||
Sbjct 297 AAGCTTTGGTGAATC---AGAGTCTGTGTCTTCACTAT-C-TG-AGAAGGATTCTGAAAT 350
Query 327 TCAACCTGAGAGTACAATGGAGTCTCATGATGATGATGAGATACAACAATCACCAACGGT 386
|||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||
Sbjct 351 TCAACCTGAGAGTACAATGGAGTCTC--G-TGATGACGAGAT---ACAATCACCAACGGT 404
Query 387 TTCTTTGGAAGTCGAAACTGAAAATGAAGATTTGAAAGATAGCATGAAGACTTTAACCGA 446
|||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct 405 TTCTTTGGAAGTAGAAACTGAAAAGGAAGAGTTGAAAGATAGCATGAAGACTTTAGCCGA 464
Query 447 GAAACTTTCAGCTGCTCTTGCTAATGCGAGTGCTAAAGATGATCTGGTGAAGCAACATGT 506
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 465 GAAACTTTCAGCTGCTCTTGCTAATGTGAGTGCTAAAGATGATCTAGTGAAGCAACATGT 524
Query 507 CAAAGTCGCAGAAGAAGCTGTCGCTGGGTGGGAGAAAGCTGAAAATGAAGTGGTTGAGTT 566
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 525 CAAAGTCGCTGAAGAAGCTGTCGCTGGGTGGGAGAAAGCTGAAAATGAAGTGGTTGAGTT 584
Query 567 GAAGGAGAAGCTCGAGGCTGCTGATGATAAGAATAGAGTGTTGGAAGATAGAGTAAGCCA 626
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 585 AAAGGAGAAGCTTGAGGCTGCTGATGATAAGAATAGAGTGTTGGAAGATAGAGTAAGCCA 644
Query 627 TCTCGATGGAGCTCTT-AAGGAGTGTGTTAGACAGTTAAGGCAAGCAAGAGATGAACAAG 685
||| ||||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 645 TCTTGATGGAGCT-TTAAAGGAGTGTGTGAGACAGTTAAGGCAAGCAAGAGATGAACAAG 703
Query 686 AACAGAGAATTCAAGATGCCGTGATCGAGAGAACCCAGGAGTTGCAGTCTTCTCA-AACC 744
||||||||||||||||||| |||||||||||||| |||||||||||||||||| | ||||
Sbjct 704 AACAGAGAATTCAAGATGCTGTGATCGAGAGAACTCAGGAGTTGCAGTCTTCT-AGAACC 762
Query 745 AGCCTTGAGAACCAGATTCTTGAAACTGCAACCAAGTCTGAGGAGCTTAGCCAAATGGCG 804
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 763 AGCCTTGAGAACCAGATTTTTGAAACTGCAACCAAGTCTGAGGAGCTTAGCCAAATGGCG 822
Query 805 GAGTCTGTGGCTAAGGAAAATGTGATGCTGAGACACGAGCTTCTTGCACGATGCGAAGAG 864
|| |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 823 GAATCTGTGGCGAAAGAAAACGTGATGCTTAGACACGAGCTTCTTGCGCGATGCGAAGAG 882
Query 865 CTAGAGATCAGAACAATTGAGAGGGATTTGAGCACTCAAGCAGCTGAAACAGCTAGCAAG 924
|||||||||||||| ||||||||||||||||| || |||||||||||||| || ||||||
Sbjct 883 CTAGAGATCAGAACTATTGAGAGGGATTTGAGTACCCAAGCAGCTGAAACCGCCAGCAAG 942
Query 925 CAACAGTTAGATAGCATAAAGAAAGTGGCGAAACTTGAGGCTGAGTGCAGGAAGCTTCGG 984
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 943 CAGCAGTTAGATAGCATAAAGAAAGTGGCGAAACTTGAGGCTGAGTGCAGGAAGTTTCGG 1002
Query 985 ATGTTGGCTAAGTCATCAGCTTCGTTTAACGATCATCGATCTACAGATAGTCATTCTGAT 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1003 ATGTTGGCTAAGTCATCAGCTTCGTTTAACGATCATCGATCTACAGATAGTCATTCTGAT 1062
Query 1045 GGAGGGGAACGAATGGATGTGAGTTGCTCTGAGTCATGGGCATCATCCACATTGATTGAA 1104
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1063 GGAGGGGAACGAATGGATGTGAGTTGCTCTGATTCATGGGCATCATCCACATTGATTGAG 1122
Query 1105 AAGAGAAGCCTTCAGGGAACTTCCTCTTCCATTGAACTTGATCTCATGGGTGATTTTCTT 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1123 AAGAGAAGCCTTCAGGGAACTTCCTCTTCCATTGAACTTGATCTCATGGGTGATTTTCTT 1182
Query 1165 GAGATGGAACGTCTTGTAGCATTGCCCGAGACACCAGATGGGAACGGTAAGAGTGGACCT 1224
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1183 GAGATGGAACGTCTTGTAGCATTGCCTGAGACGCCAGATGGGAACGGTAAGAGTGGACCT 1242
Query 1225 GAATCAGTTACAGAGGAGACTGTTGTTCATTCAGAGAACTCGTTGGCTGCTGAAATAGAA 1284
|||||||||||||| ||| |||||||| |||||||||||||| ||| |||||||||||
Sbjct 1243 GAATCAGTTACAGAAGAGGTTGTTGTTCCCTCAGAGAACTCGTTAGCTTCTGAAATAGAA 1302
Query 1285 GTATTGACTTCTCGAACTAAGGAGCTTGAAGAGAAGTTGGAAAAGTTAGAAGCTGAGAAA 1344
||| |||||||||| | |||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1303 GTACTGACTTCTCGCATTAAGGAACTTGAAGAGAAGTTGGAAAAGTTAGAAGCCGAGAAA 1362
Query 1345 CATGAGCTCGAAAAGGAAGTTAAATGTAACAGAGAAGAGGCTGTTGTTCATGTAGAGAAC 1404
||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1363 CATGAGCTCGAGAATGAAGTTAAATGTAACAGAGAAGAGGCTGTTGTTCATATAGAGAAC 1422
Query 1405 TCAGAAGTACTGACTTCTCGAATTAAGGAACTTGAAGAGAAGTTGGAAAAGTTAGAAGCG 1464
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 1423 TCAGAAGTACTGACTTCTCGAACTAAGGAACTTGAAGAAAAGTTGGAAAAGTTAGAAGCA 1482
Query 1465 GAGAAAAATAAGCTCGAAAA-TGAATTTAAAGGTAACAGAGAAGAGGCTGTTGTTCACGT 1523
|||||| | ||||| |||| |||| ||||| ||||||||||| ||||||||||||||||
Sbjct 1483 GAGAAAGAGGAGCTC-AAAAGTGAAGTTAAATGTAACAGAGAAAAGGCTGTTGTTCACGT 1541
Query 1524 AGAGAACTCGTTGGCTGCTGAAATAGAAGTATTGACTTCTCGAACAAAGGAACTTGAAGA 1583
||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 1542 AGAGAACTCATTGGCTGCTGAAATAGAAGTACTGACTTCTCGAACTAAGGAACTTGAAGA 1601
Query 1584 ACAGTTGGAGAAGTTAGAAGCGGAGAAAGATGAGCTCGAAAGTGAAGTTAAATGTAACAG 1643
||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||
Sbjct 1602 ACAGTTGGAGAAGTTAGAAGCGGAGAAAGTTGAACTCGAAAGTGAAGTAAAATGTAACAG 1661
Query 1644 AGAAGAGGCTGTTGCTCACGTAGAGAACTGGTTGGCTGCTGAAATAGAAGTATTGACTTG 1703
|||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||
Sbjct 1662 AGAAGAGGCTGTTGCTCAAGTAGAGAACTCGTTGGCTACTGAAATAGAAGTATTGACTTG 1721
Query 1704 CCGAATTAAGCAACTTGAGGAAAAGTTATCGAAGTTGGAAGCAGAGAAAGATGAGCTCAA 1763
|||||| |||||||||||||| |||||| ||||||||||| ||||||||||||||||||
Sbjct 1722 CCGAATCAAGCAACTTGAGGAGAAGTTAGAGAAGTTGGAAGTAGAGAAAGATGAGCTCAA 1781
Query 1764 ATGTGAAGTTAGATGTAACAGAGAAGTGGAGAGCACATTGAGATTTGAGCTCGAAGCTAT 1823
| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1782 AAGTGAAGTTAAATGTAACAGGGAAGTGGAGAGCACATTGAGATTTGAGCTCGAAGCTAT 1841
Query 1824 TGCTTGTGATAAAATGGAGCTGGAAAATAAGTTGGAGAAGTTGGAGGTTGAGAAAGCTGA 1883
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1842 TGCTTGTGAAAAAATGGAGCTGGAAAATAAGTTGGAGAAGTTGGAAGTTGAGAAAGCTGA 1901
Query 1884 GCTGCAAATATCTTTTGACATAATCAAAGATAAGTATAAAGAATCTCAAGTTTGTTTGCA 1943
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||
Sbjct 1902 GCTGCAAATATCTTTTGACATAATCAAAGATAAATATGAAGAATCTCAAGTTTGTCTGCA 1961
Query 1944 AGAAATTGAGACGAAGTTGGAGGAGATACAAACGGAGATAAGAA-TGGCTAACGAACTAA 2002
|||||| ||||||||| ||| |||||||||||||||||| | || | | |||||||||||
Sbjct 1962 AGAAATCGAGACGAAGCTGGGGGAGATACAAACGGAGATGA-AACTCGTTAACGAACTAA 2020
Query 2003 AAGCAGAAGTAGAATCTCAAATCATCTCCATGGAAG-ATGAGGCAAAGACTAAATCCACA 2061
|||| |||||||| ||||||| |||| | ||||||| | || ||||||||||||||| ||
Sbjct 2021 AAGCTGAAGTAGAGTCTCAAACCATCGCAATGGAAGCA-GATGCAAAGACTAAATCCGCA 2079
Query 2062 AAGATCAAATCTTTGGAAGAAGAAATGAGAAAGGAGAGGATTGCTTTTGATGAGCTTAGG 2121
||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 2080 AAGATTGAATCTTTGGAAGAAGACATGAGAAAGGAGAGGTTTGCTTTTGATGAGCTTAGG 2139
Query 2122 AGAAAATGTGAGGCTCTTGAACAAGAGATATCTCTGCATAAAGAGAACTCAATCAAGAGT 2181
||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||
Sbjct 2140 AGAAAATGTGAGGCTCTTGAAGAAGAGATCTCTCTCCATAAAGAGAACTCAATCAAGAGT 2199
Query 2182 GAAAATAAAGAACCAAAGATCAAACAGGAAGACATAGAAACAGCTGCAGGGAAACTTGCG 2241
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2200 GAAAATAAAGAACCCAAGATCAAACAGGAAGACATAGAAACAGCTGCAGGGAAACTTGCG 2259
Query 2242 AATTGTCAGAAAACAATAGCTTCGTTGGGAAAACAGCTT-CAATCTCTTGCAACACTTGA 2300
||||||||||||||||||||||| ||||| |||||| || || || ||||||||||||||
Sbjct 2260 AATTGTCAGAAAACAATAGCTTCATTGGGGAAACAG-TTGCAGTCCCTTGCAACACTTGA 2318
Query 2301 AGATTTCTTAACCGATACACCGAGTA-TTCCAATGGCTGCAAATGGTGTAAGCAGCA--A 2357
||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |
Sbjct 2319 AGATTTCTTAACCGATACACCGA-TAATTCCAATGGCTGCAAATGGTGTAAGCAGCAGCA 2377
Query 2358 -C--CT-AGAGAGTTGGAGGGTTCACAAGAACGAAACTTTCATGGCGAGAAACCAACCCG 2413
| || ||||||||||| ||||||||| ||||||||||||||| | ||||| || || |
Sbjct 2378 GCAACTCAGAGAGTTGGAAGGTTCACAAAAACGAAACTTTCATGACAAGAAATCATCCTG 2437
Query 2414 AGTCAATCAAATCAACCAAGGAAACATCTCCGTGTTCCTCTTCTTC--C-GCGGCTGCTG 2470
|||| |||||| ||||||| ||||||||||| | ||| |||||||| | ||| ||||||
Sbjct 2438 AGTCCATCAAACCAACCAAAGAAACATCTCCATCTTCTTCTTCTTCTACTGCGTCTGCTG 2497
Query 2471 CTGTTTCAATGCCAGTTTCAACGAACCGAGGGAGTTCTGAGAAGAATCGCAATGGATTTG 2530
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2498 CTGTTTCAATGCCAGTTTCAACAAACCGAGGGAGTTCTGAGAAGAATCGCAATGGATTTG 2557
Query 2531 CAACAGTATTCACAAGAAGTAAAGACGGTATCCATCTAGCAATTTAGCATAACTTTGGCA 2590
||||||||||||||||||||||||||||||||||||| || || || |||||||||||||
Sbjct 2558 CAACAGTATTCACAAGAAGTAAAGACGGTATCCATCTGGCTATATAACATAACTTTGGCA 2617
Query 2591 G--TA-----------T---CTCTTAGG-TTTAAAA-GGATC-GTTTTTAACAACCACTT 2631
| || | |||||||| ||||||| ||||| |||||||||| ||||||
Sbjct 2618 GAGTAGGCAGAGAAACTTATCTCTTAGGGTTTAAAAAGGATCCGTTTTTAACA-CCACTT 2676
Query 2632 TGTTCCTTTTTCCAGATTTTGAATCC-T--TAGTAGTTT-AAAAGATAATCTCTAGTGTA 2687
|||||| ||||||||||||||||||| | ||||||||| ||||| ||||||||||||||
Sbjct 2677 TGTTCCCTTTTCCAGATTTTGAATCCATAGTAGTAGTTTTAAAAGTTAATCTCTAGTGTA 2736
Query 2688 ATGC--TGCAGGGATATTCCATAAAAGAAGTT 2717
|||| || | ||||||||||||||||| |||
Sbjct 2737 ATGCAGTGGATGGATATTCCATAAAAGATGTT 2768
Score = 399 bits (216), Expect = 5e-110
Identities = 332/385 (86%), Gaps = 19/385 (5%)
Strand=Plus/Plus
Query 1407 AGAAGTACTGACTTCTCGAATTAAGGAACTTGAAGAGAAGTTGGAAAAGTTAGAAGCGGA 1466
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1299 AGAAGTACTGACTTCTCGCATTAAGGAACTTGAAGAGAAGTTGGAAAAGTTAGAAGCCGA 1358
Query 1467 GAAAAATAAGCTCGAAAATGAATTTAAAGGTAACAGAGAAGAGGCTGTTGTTCACGTAGA 1526
|||| || ||||||| |||||| ||||| ||||||||||||||||||||||||| ||||
Sbjct 1359 GAAACATGAGCTCGAGAATGAAGTTAAATGTAACAGAGAAGAGGCTGTTGTTCATATAGA 1418
Query 1527 GAACTCGTTGGCTGCTGAAATAGAAGTATTGACTTCTCGAACAAAGGAACTTGAAGAACA 1586
|||||| | |||||| ||||||||||||| ||||||||||||||| |
Sbjct 1419 GAACTC-----------A----GAAGTACTGACTTCTCGAACTAAGGAACTTGAAGAAAA 1463
Query 1587 GTTGGAGAAGTTAGAAGCGGAGAAAGATGAGCTCGAAAGTGAAGTTAAATGTAACAGAGA 1646
|||||| ||||||||||| |||||||| |||||| |||||||||||||||||||||||||
Sbjct 1464 GTTGGAAAAGTTAGAAGCAGAGAAAGAGGAGCTCAAAAGTGAAGTTAAATGTAACAGAGA 1523
Query 1647 AGAGGCTGTTGCTCACGTAGAGAACTGGTTGGCTGCTGAAATAGAAGTATTGACTTGC-C 1705
| ||||||||| |||||||||||||| ||||||||||||||||||||| |||||| | |
Sbjct 1524 AAAGGCTGTTGTTCACGTAGAGAACTCATTGGCTGCTGAAATAGAAGTACTGACTT-CTC 1582
Query 1706 GAATTAAGCAACTTGAGGAAAAGTTATCGAAGTTGGAAGCAGAGAAAGATGAGCTC-AAA 1764
||| |||| ||||||| ||| |||| |||||| ||||| ||||||| ||| ||| |||
Sbjct 1583 GAACTAAGGAACTTGAAGAACAGTTGGAGAAGTTAGAAGCGGAGAAAGTTGAACTCGAAA 1642
Query 1765 TGTGAAGTTAGATGTAACAGAGAAG 1789
||||||| | ||||||||||||||
Sbjct 1643 -GTGAAGTAAAATGTAACAGAGAAG 1666
Score = 243 bits (131), Expect = 9e-63
Identities = 241/290 (83%), Gaps = 23/290 (8%)
Strand=Plus/Plus
Query 1503 AGAAGAGGCTGTTGTTCACGT-AGAGAACTCGTTGGCTGCTGAAATAGAAGTATTGACTT 1561
|||||||| |||||||| | | |||||||||||| ||| |||||||||||||| ||||||
Sbjct 1254 AGAAGAGGTTGTTGTTC-CCTCAGAGAACTCGTTAGCTTCTGAAATAGAAGTACTGACTT 1312
Query 1562 CTCGAACAAAGGAACTTGAAGA-ACAGTTGGAGAAGTTAGAAGCGGAGAAAGATGAGCTC 1620
|||| | |||||||||||||| | ||||||| ||||||||||| |||||| ||||||||
Sbjct 1313 CTCGCATTAAGGAACTTGAAGAGA-AGTTGGAAAAGTTAGAAGCCGAGAAACATGAGCTC 1371
Query 1621 GA-AAGTGAAGTTAAATGTAACAGAGAAGAGGCTGTTGCTCACGTAGAGAACTGGTTGGC 1679
|| || |||||||||||||||||||||||||||||||| ||| ||||||||| |
Sbjct 1372 GAGAA-TGAAGTTAAATGTAACAGAGAAGAGGCTGTTGTTCATATAGAGAACT------C 1424
Query 1680 TGCTGAAATAGAAGTATTGACTTGC-CGAATTAAGCAACTTGAGGAAAAGTTATCGAAGT 1738
| |||||| |||||| | |||| |||| ||||||| |||||||| ||||
Sbjct 1425 -----A----GAAGTACTGACTT-CTCGAACTAAGGAACTTGAAGAAAAGTTGGAAAAGT 1474
Query 1739 TGGAAGCAGAGAAAGATGAGCTCAAATGTGAAGTTAGATGTAACAGAGAA 1788
| |||||||||||||| ||||||||| ||||||||| |||||||||||||
Sbjct 1475 TAGAAGCAGAGAAAGAGGAGCTCAAAAGTGAAGTTAAATGTAACAGAGAA 1524
> AT1G21810.1 | Symbols: | Plant protein of unknown function (DUF869)
| chr1:7656399-7658634 REVERSE LENGTH=2066
Length=2066
Score = 193 bits (104), Expect = 1e-47
Identities = 217/269 (81%), Gaps = 18/269 (7%)
Strand=Plus/Plus
Query 2075 TGGAAGAAGAAATGAGAAAGGAGAGGATTGCT-TTTGATGAGCT-TAGGAGAAAATGTGA 2132
|||||| ||| |||||||||||||||||| | | ||||| ||| |||| ||| |||||
Sbjct 1361 TGGAAGCAGAGGTGAGAAAGGAGAGGATTG-TCTCTGATGGGCTAAAGGA-AAAGTGTGA 1418
Query 2133 GGC-TCTTGAACAAGAG-ATATCTCTG-CATA-AAGAGAACTC-A--ATCAAGAGTGAAA 2185
| | | ||||| ||||| || | ||| ||||||| | | |||||||| ||||
Sbjct 1419 GACAT-TTGAAGAAGAGCTTAGAAGAGAGATAGAAGAGAAGACAATGATCAAGAGAGAAA 1477
Query 2186 ATA-AAGAACCAAAGATCAAACAGGAAGACATAGAAACAGCTGCAGGGAAACTTGC-GAA 2243
| | |||||||||||||||||||||||||||| |||||||||||| ||| |||| ||
Sbjct 1478 A-AGTGGAACCAAAGATCAAACAGGAAGACATAGCAACAGCTGCAGGAAAATTTGCAGA- 1535
Query 2244 TTGTCAGAAAACAATAGCTTCG-TTGGGAAAACAGCTTCAATCTCTTGCAACACTTGAAG 2302
|||||||||||||||||| || |||||||| ||||| ||||||||||||||||| ||||
Sbjct 1536 TTGTCAGAAAACAATAGCATCACTTGGGAAA-CAGCTACAATCTCTTGCAACACTAGAAG 1594
Query 2303 ATTTCTTAACCGATACACCGAGTATTCCA 2331
| ||||| | ||||||| | || ||||||
Sbjct 1595 AATTCTTGATCGATACAGCTAGCATTCCA 1623
Score = 75.0 bits (40), Expect = 4e-12
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 2494 AACCGAGGGAGTTCTGAGAAGAATCGCAATGGATTTGCAACAGTATTCACAAGAAGTA 2551
||||||||||||||||||||||||||||| |||||||| || || ||||| ||||||
Sbjct 1804 AACCGAGGGAGTTCTGAGAAGAATCGCAACGGATTTGCCACGGTTTTCACTCGAAGTA 1861
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134949076670
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5