BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476937
Length=2567
Score E
Sequences producing significant alignments: (Bits) Value
AT1G77740.1 | Symbols: PIP5K2 | phosphatidylinositol-4-phosphat... 3600 0.0
AT1G21980.1 | Symbols: ATPIP5K1, ATPIPK1, PIP5K1 | phosphatidyl... 2146 0.0
> AT1G77740.1 | Symbols: PIP5K2 | phosphatidylinositol-4-phosphate
5-kinase 2 | chr1:29220538-29224220 FORWARD LENGTH=2698
Length=2698
Score = 3600 bits (1949), Expect = 0.0
Identities = 2246/2385 (94%), Gaps = 37/2385 (2%)
Strand=Plus/Plus
Query 44 AAGAAGCTAGGGTTTATCTGATGAGTAGATGATGCGTGAACCGCTTG-T--C--A-TCga 97
||||||||||||||| ||||||||||||||||||||||||||||||| | | | ||
Sbjct 47 AAGAAGCTAGGGTTTCTCTGATGAGTAGATGATGCGTGAACCGCTTGTTAGCGAAGAAGA 106
Query 98 agaagaagaagctactgaagttttacttgtggagaagaagaaggttttagaagaggtgtg 157
||||||||||||||||||||||||||| |||||||||| ||| | | ||||
Sbjct 107 AGAAGAAGAAGCTACTGAAGTTTTACTAGTGGAGAAGACGAA-G---T--------TGTG 154
Query 158 taagagacg-ggttaga-gaaggaggagacgaagaagagagaagagaCGATTTGTTGTTA 215
||||||||| || ||| ||| || | ||| |||||||||||||||||||||||||||
Sbjct 155 TAAGAGACGAGG--AGACGAA-GAAAAAACG--GAAGAGAGAAGAGACGATTTGTTGTTA 209
Query 216 CTAGCTTTAACGCCGATGGTACGATCGAAATCTCTAGGAACTACACGGCGCGTCACTCCA 275
|||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 210 CTAGCTTTAACGCCGATGGTACGATCGAAATCTCAAGGAACTACTCGGCGCGTCACTCCC 269
Query 276 ACGCCACCTCC-GTTAGACGTGGAGAAGCCGTTACCAAACGGAGATCTCTATATGGGAAC 334
||||||||||| ||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 270 ACGCCACCTCCTGTT-GACGTGGAGAAACCGTTACCAAACGGAGATCTCTACATGGGAAC 328
Query 335 GTTTTCCGGCGGGTTTCCCAACGGATCCGGTAAGTATTTGTGGAAGGATGGTTGTATGTA 394
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 329 GTTTTCCGGCGGGTTTCCCAACGGATCCGGTAAGTATTTGTGGAAGGATGGGTGTATGTA 388
Query 395 CGAAGGCGAGTGGAAACGTGGGAAAGCGAGTGGTAAAGGCAAGTTTTCATGGCCGAGTGG 454
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 389 CGAAGGCGAGTGGAAACGTGGTAAAGCGAGTGGTAAAGGCAAGTTTTCGTGGCCGAGTGG 448
Query 455 TGCGACTTACGAAGGAGAGTTCAAATCTGGGAGAATGGAAGGATTTGGGACTTTTGTTGG 514
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 449 TGCGACTTATGAAGGAGAGTTCAAATCTGGGAGAATGGAAGGATCTGGGACTTTTGTTGG 508
Query 515 CGTTGATGGTGATACTTATCGAGGCTCTTGGGTTGCTGATCGGAAACATGGTCATGGTCA 574
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 509 TGTTGATGGTGATACTTATCGTGGCTCTTGGGTTGCTGATCGGAAACAAGGTCATGGTCA 568
Query 575 GAAGAGATATGCCAACGGAGATTACTATGAAGGAACATGGCGGCGGAATCTACAGGATGG 634
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 569 GAAGAGATATGCCAACGGAGATTACTATGAAGGTACATGGCGGCGGAATCTTCAGGATGG 628
Query 635 GAGA-GGACGATATGTTTGGATGAATGGGAATCAGTATACAGGAGAATGGAGGAATGGTG 693
|||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 629 GAGAGGGA-GATATGTTTGGATGAATGGGAATCAGTATACAGGAGAGTGGAGAAATGGTG 687
Query 694 TGATTTGTGGTAAAGGTGTGCTTGCTTGGCCTAATGGGAATAGATTTGAAGGTCAATGGG 753
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 688 TGATATGTGGTAAAGGTGTGCTTGCTTGGCCTAATGGGAATAGATATGAAGGTCAATGGG 747
Query 754 AAAATGGAGTTCCTAAAGGAAGTGGTGTGTTTACTTGGCCTGATGGAAGTTCTTGGATCG 813
||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| |
Sbjct 748 AAAATGGTGTTCCTAAAGGAAGTGGTGTGTTTACTTGGGCTGATGGAAGTTCGTGGATTG 807
Query 814 GTTCTTGGAATGAGAGTAGTAATCTCATGAGGAAtttttttGATGGGATTGAGAAGAATG 873
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 808 GTTCTTGGAATGAGAGTAGTAATCTCATGAGGAATTTCTTTGATGGGATTGAGAAGAATG 867
Query 874 AGTTGATTGTTGCCACGAGGAAGAGATCTTCTGTTGATAGTGGAGCTGGGAGTTTGACTG 933
||||||||||||| || |||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct 868 AGTTGATTGTTGCGACTAGGAAGAGATCTTCGGTTGATAGTGGCGCTGGAAGTTTGACTG 927
Query 934 GGGAGAAGATTTTCCCTAGAATCTGTATTTGGGAATCTGATGGTGAAGCTGGAGATATTA 993
||||||||||||||||||| || ||||||||||| |||||||| |||||||| |||||||
Sbjct 928 GGGAGAAGATTTTCCCTAGGATATGTATTTGGGAGTCTGATGGAGAAGCTGGGGATATTA 987
Query 994 CTTGTGATATTGTTGATAATGTGGAAGCTTCTGTGATTTACAGAGATAGGATTTCTATTG 1053
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 988 CTTGTGATATTGTTGATAATGTGGAAGCTTCTGTGATATACAGAGATAGGATTTCTATTG 1047
Query 1054 ATCGTGATGGGTTTCGTCAGTTTAGGAAGAATCCTTGTTGTTTCAGCGGTGAGGCTAAGA 1113
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1048 ATAAAGATGGGTTTCGTCAGTTTAGGAAGAATCCTTGTTGTTTCAGCGGTGAGGCTAAGA 1107
Query 1114 AACCTGGAGAGACCATATCTAAAGGGCATAAGAAATACGATTTGATGCTCAACTTGCAAC 1173
||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| |
Sbjct 1108 AACCTGGAGAGACGATATCTAAAGGGCATAAGAAATATGATTTGATGCTCAACCTGCAGC 1167
Query 1174 ATGGAATCAGGTACTCTGTCGGCAAACATGCTTCCGTTGTTCGAGATCTCAAACATAGCG 1233
||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || |
Sbjct 1168 ATGGAATTAGGTACTCTGTCGGCAAACACGCTTCCGTTGTTCGAGATCTCAAACAGAGTG 1227
Query 1234 ATTTTGACCCAAGTGAAAAGTTCTGGACAAGGTTCCCACCGGAGGGTTCTAAGACCACAC 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1228 ATTTTGACCCAAGTGAAAAGTTCTGGACAAGGTTCCCACCGGAGGGTTCTAAGACCACAC 1287
Query 1294 CACCACATCTGTCTGTTGATTTCCGCTGGAAGGACTATTGCCCTTTGGTGTTTAGACGGC 1353
|||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1288 CACCGCATCTATCTGTGGATTTCCGCTGGAAGGACTATTGCCCTTTGGTGTTTAGACGGC 1347
Query 1354 TGAGGGAGCTATTCACGGTGGATCCTGCTGATTACATGCTAGCTATCTGTGGAAACGATG 1413
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1348 TTAGGGAGCTATTCACGGTGGATCCTGCCGATTACATGCTAGCTATCTGTGGAAACGATG 1407
Query 1414 CTCTTAGGGAACTATCTTCGCCTGGAAAGAGTGGAAGttttttttACTTAACTCAAGATG 1473
| ||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1408 CCCTTAGGGAATTGTCTTCGCCTGGAAAGAGTGGAAGCTTTTTTTACTTAACTCAAGATG 1467
Query 1474 ACAGATTTATGATCAAGACGGTGAAGAAATCAGAAGTCAAGGTGCTTCTACGAATGCTTC 1533
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1468 ACAGATTTATGATCAAGACGGTGAAGAAATCTGAAGTCAAGGTGCTTCTACGAATGCTTC 1527
Query 1534 CAAGTTACTACAAACATGTCTGCCAGTATGAAAATACACTTGTGACTCGGTTCTACGGTG 1593
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1528 CAAGTTACTACAAACACGTCTGCCAGTATGAAAATACACTTGTGACTAGGTTCTATGGTG 1587
Query 1594 TGCACTGTATCAAACCTGTTGGTGGCCAGAAGACTCGGTTTATTGTCATGGGGAACTTAT 1653
|||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 1588 TGCATTGTATCAAACCTGTTGGTGGCCAGAAGACTCGGTTTATCGTTATGGGGAACTTGT 1647
Query 1654 TCTGCTCCGAATATAGAATCCAGAGACGGTTTGACCTGAAAGGGTCTTCCCATGGACGGT 1713
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 1648 TCTGCTCCGAATATAGAATCCAGAGAAGGTTTGACCTTAAAGGGTCTTCCCATGGACGGT 1707
Query 1714 ATACCTCCAAACCCGAAGGGGAAATTGATGAGACTACTACCCTCAAGGACCTTGATCTCA 1773
||||||||||||| |||||||||||||||||||| ||||| || ||||||||||||||||
Sbjct 1708 ATACCTCCAAACCTGAAGGGGAAATTGATGAGACCACTACTCTTAAGGACCTTGATCTCA 1767
Query 1774 ATTTTGCTTTCCGTCTTCAGAGAAATTGGTACCAAGAGCTTATGACGCAAATTAAGTGCG 1833
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1768 ATTTTGCTTTCCGTCTTCAGAGAAATTGGTACCAAGAGCTTATGACGCAAATTAAACGCG 1827
Query 1834 ACTGTGAGTTCTTGGAAGCTGAGAGAATTATGGATTATAGCCTTTTGGTTGGCGTTCACT 1893
|||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct 1828 ACTGTGAGTTCTTGGAAGCTGAAAGAATAATGGATTATAGTCTTTTGGTTGGCGTTCACT 1887
Query 1894 TCCGTGATGACACCACAGGAGACAAAATGGGGCTCTCTCCATTCGTTTTGAGATCTGGTA 1953
|||||||||||| ||||||||||||||||||| | |||||||| || |||||||||||||
Sbjct 1888 TCCGTGATGACAACACAGGAGACAAAATGGGGTTATCTCCATTTGTATTGAGATCTGGTA 1947
Query 1954 AGATAGAGTCGTACCAAAACGAGAAATTTATGCGTGGTTGTCGCTTCTTGGAAGCGGAAC 2013
|||||||||| ||||||| ||| |||||||||||||||||||| |||||||| |||||||
Sbjct 1948 AGATAGAGTCATACCAAAGCGAAAAATTTATGCGTGGTTGTCGGTTCTTGGAGGCGGAAC 2007
Query 2014 TTCAAGACATGGACCGCATTTTAGCTGGCAGGAAACCATTGATTCGATTAGGGGCAAACA 2073
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2008 TTCAAGACATGGACCGCATTTTAGCTGGCAGGAAACCATTGATTCGATTAGGCGCAAACA 2067
Query 2074 TGCCTGCAAGAGCAGAACGAATGGCGAGAAGAAGCGACTATGATCAGTATTCCTCTGGAG 2133
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2068 TGCCTGCAAGAGCAGAACGAATGGCGAGAAGAAGCGACTATGATCAGTATTCCTCAGGAG 2127
Query 2134 GGACCAACTATCTATCTCACGGAGAGGTCTACGAAGTGGTTCTATATTTTGGAATCATTG 2193
|||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2128 GGACCAACTACCAATCTCATGGAGAGGTCTACGAAGTGGTTCTATATTTTGGAATCATTG 2187
Query 2194 ACATATTACAAGATTACGACATAAGCAAGAAGATCGAGCATGCTTACAAGTCTCTACAAG 2253
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2188 ACATTTTACAAGATTACGACATAAGCAAGAAGATCGAGCATGCTTACAAGTCTCTACAAG 2247
Query 2254 CTGATCCGGCTTCAATCTCAGCCGTTGATCCCAAACTATACTCAAGAAGGTTCAGAGATT 2313
|||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 2248 CTGACCCGGCTTCAATCTCTGCCGTTGATCCCAAACTATACTCAAGAAGGTTTAGAGATT 2307
Query 2314 TCATCAGCAGAATCTTCATCGAAGACGGCTAA--TGAAGGTCTA---ATA---GCCCCAT 2365
|||||||||||||||||||||||||||||||| |||||||||| ||| |||||||
Sbjct 2308 TCATCAGCAGAATCTTCATCGAAGACGGCTAAAATGAAGGTCTACTTATATTAGCCCCAT 2367
Query 2366 CATTGAAAGGTCAAACCTAAGCTCCTCGCTTTTTACCTCAGATAA 2410
|||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2368 CATTGAAAGGTCAAACCTAAGCTCCTCGCTTTATACCTCAGATAA 2412
> AT1G21980.1 | Symbols: ATPIP5K1, ATPIPK1, PIP5K1 | phosphatidylinositol-4-phosphate
5-kinase 1 | chr1:7734739-7738661 FORWARD
LENGTH=2925
Length=2925
Score = 2146 bits (1162), Expect = 0.0
Identities = 1859/2191 (85%), Gaps = 65/2191 (3%)
Strand=Plus/Plus
Query 186 gaagaagagagaagagaCGATTTGTTGTTACTAGCT---T-TAACGCCGATGGT-ACGAT 240
|||| ||||||| |||||| |||| |||| ||||| | | || || ||||| | |||
Sbjct 417 GAAGTAGAGAGACGAGACGGTTTGGTGTTGTTAGCTCAATCT-ACTCCAATGGTGA-GAT 474
Query 241 CGAAATCTCTAGGAACTACACGGCGCGTCACTCCAACGCCACCTCCGTTAGACGTGGAGA 300
||| ||||| |||||| || |||||||| ||||| ||| | | | | |||| || ||||
Sbjct 475 CGAGATCTCAAGGAACGACTCGGCGCGTGACTCCCACG-C-CTTTAG-TAGATGTTGAGA 531
Query 301 AGCCGTTACCAAACGGAGATCTCTATATGGGAACGTTT-TCCGGCGGGTTTCCCA-ACGG 358
||||| |||||||||||||||| || || |||| |||| ||||| |||||| ||| | ||
Sbjct 532 AGCCGCTACCAAACGGAGATCTTTACATCGGAA-GTTTCTCCGGTGGGTTT-CCACATGG 589
Query 359 ATCCGGTAAGTATTTGTGGAAGGATGGTTGTATGTACGAAGGCGAGTGGAAACGTGGGAA 418
|||||| |||||| | ||||| ||||| || ||||||||||| || |||||||| |||||
Sbjct 590 ATCCGGGAAGTATCTATGGAAAGATGGGTGCATGTACGAAGGAGATTGGAAACGAGGGAA 649
Query 419 AGC--GAGTGGTAAAGGCAAGTTTTCATGGCCGAGTGGTGCGACTTACGAAGGAGAGTTC 476
||| || || |||||||| || |||||||| ||||| || ||||||||||| || |||
Sbjct 650 AGCTTCAG-GG-AAAGGCAAATTCTCATGGCCAAGTGGAGCTACTTACGAAGGTGAATTC 707
Query 477 AAATCTGGGAGAATGGAAGGATTTGGGACTTTTGTTGGCGTTGATGGTGATACTTATCGA 536
|||||||||||||||||||| ||||| ||||| ||| | |||||| ||||||||| ||
Sbjct 708 AAATCTGGGAGAATGGAAGGTTTTGGTACTTTCACTGGAGCTGATGGAGATACTTATAGA 767
Query 537 GGCTCTTGGGTTGCTGATCGGAAACATGGTCATGGTCAGAAGAGATATGCCAACGGAGAT 596
|| |||||||||||||| | ||||| || ||||| || ||| | ||||| || ||||||
Sbjct 768 GGAACTTGGGTTGCTGATAGAAAACACGGACATGGACAAAAGCGTTATGCAAATGGAGAT 827
Query 597 TACTATGAAGGAACATGGCGGCGGAATCTACAGGATGGGAGAGG-ACGATATGTTTGGAT 655
| |||||||| || ||| | |||||||||| ||||| ||||| | | ||||| ||||
Sbjct 828 TTTTATGAAGGTACTTGGAGAAGGAATCTACAAGATGGTAGAGGTA-GGTATGTGTGGA- 885
Query 656 G-AATGGGAATCAGTATACAGGAGAATGGAGGAATGGTGTGATTTGTGGTAAAGGTGTGC 714
| ||||||||||||||||| ||||| ||| | | ||||||||||| ||| |||||| |||
Sbjct 886 GAAATGGGAATCAGTATACTGGAGAGTGGCGTAGTGGTGTGATTTCTGGGAAAGGTTTGC 945
Query 715 TTGCTTGGCCTAATGGGAATAGATTTGAAGGTCAATGGGAAAAT-GGAGTTCCTAAA-GG 772
||| |||||||||||||||| ||| ||||||| ||||| ||| ||| |||||||| ||
Sbjct 946 TTGTTTGGCCTAATGGGAATCGATATGAAGGTTTGTGGGAGAATGGGA-TTCCTAAAGGG 1004
Query 773 AAGTGGTGTGTTTACTTGGCCTGATGGAAGTTCTTG-GATCGGTTCTTGGAATGAGAGTA 831
|| |||||||||||||||| |||||| |||||||| | | ||| |||||||||||||||
Sbjct 1005 AA-TGGTGTGTTTACTTGGAGTGATGGGAGTTCTTGTG-TTGGTGCTTGGAATGAGAGTA 1062
Query 832 GTAATCTCATGAGGAAtttttttGATGG-GATTGAGAAGAATGAGTTGATTGTTGCCACG 890
| || | ||||||| ||| ||| |||| | ||||||||||||| |||||||| | |
Sbjct 1063 AT-AT-T-ATGAGGAGTTTCTTTAATGGTG-TTGAGAAGAATGATTTGATTGTGGGGAAT 1118
Query 891 AGGAAGAGATCTTCTGTTGATAGTGGAGCTGGGAGTTTGACTGGGGAG-AAGATTTTCCC 949
||||||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||
Sbjct 1119 AGGAAGAGATCTTCTGTTGATAGTGGAGCTGGGAGTTTGGGAGGTGAGAAAG-TTTTTCC 1177
Query 950 TAGAATCTGTATTTGGGAATCTGATGGTGAAGCTGGAGATATTACTTGTGATATTGTTGA 1009
||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1178 AAGAATCTGTATTTGGGAATCTGATGGTGAAGCTGGAGATATCACTTGTGATATTATTGA 1237
Query 1010 TAATGTGGAAGCTTCTGTGATTTACAGAGATAGGATTTCTATTGATCGTGATGGGTTTCG 1069
|||||| |||||||| ||||||| ||||||||||| ||| ||||||||||||||||| |
Sbjct 1238 TAATGTTGAAGCTTCCATGATTTATAGAGATAGGATCTCTGTTGATCGTGATGGGTTTAG 1297
Query 1070 TCAGTTTAGGAAGAATCCTTGTTG-TTTCAGCGGTGAGGCTAAGAAACCTGGAGAGACCA 1128
||||||| ||||||||||||||| ||| | ||||||||||||||||||||| |||| |
Sbjct 1298 GCAGTTTAAGAAGAATCCTTGTTGGTTTAAT-GGTGAGGCTAAGAAACCTGGACAGACTA 1356
Query 1129 TATCTAAAGGGCATAAGAAATACGATTTGATGCTCAACTTGCAAC-ATGGAATCAGGTAC 1187
| |||||||||||||||||||| ||||||||||| || |||||| | |||||||||||
Sbjct 1357 TTTCTAAAGGGCATAAGAAATATGATTTGATGCTGAATTTGCAATTA-GGAATCAGGTAT 1415
Query 1188 TCTGTCGGCAAACATGCTTCCG-TTGTTCGAGATCTCAAACATAGC-GATTTTGACCCAA 1245
||||| |||||||||||||| | ||||||| ||||| ||||| | | ||||| || ||||
Sbjct 1416 TCTGTTGGCAAACATGCTTC-GATTGTTCGTGATCTTAAACAGA-CTGATTTCGATCCAA 1473
Query 1246 -GTGA-AAAGTTCTGGACAAGGTTCCCACCGGA-GGGTTCTAAGACCACACCACCACATC 1302
| || ||| || ||||||||||| ||||| || ||| ||||||| ||||| || ||||
Sbjct 1474 AG-GAGAAATTT-TGGACAAGGTTTCCACCAGAAGGGA-CTAAGACAACACCGCCGCATC 1530
Query 1303 TGTCTGTTGATTTCCGCTGGAAGGACTATTGCCCTTTGGTGTTTAGACGGCTGAGGGAGC 1362
||| || |||||| | |||||||| ||||||||||| ||||| ||||| || |||||||
Sbjct 1531 AGTCAGTGGATTTCAGGTGGAAGGATTATTGCCCTTTAGTGTTCAGACGTCTCAGGGAGC 1590
Query 1363 TATTC-ACGGTGGATCCTGCTGATTACATGCTAGCTATCTGTGGAAACGATGCTCTTAGG 1421
| ||| | | ||||||| ||| | || ||||||||||| |||||||| |||||||| |
Sbjct 1591 TTTTCCAAG-TGGATCCAGCTAAGTATATGCTAGCTATATGTGGAAATGATGCTCTCCGC 1649
Query 1422 GAACTATCTTCGCCTGGAAAGAGTGGAAGttttttttACTTAACTCAAGATGACAGATTT 1481
||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||
Sbjct 1650 GAACTATCTTCACCTGGAAAGAGTGGAAGCTTTTTTTACCTAACTCAAGATGATAGATTT 1709
Query 1482 ATGATCAAGACGGTGAAGAAATCAGAAGTCAAGGTGCTTCTACGAATGCTTCCAAGTTAC 1541
|||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct 1710 ATGATCAAAACGGTGAAGAAATCAGAAGTCAAGGTTCTTCTAAGAATGCTTCCAAGTTAC 1769
Query 1542 TACAAACATGTCTGCCAGTATGAAAA-TACACTTGTGACTCGGTTCTACGGTGTGCACTG 1600
||||||||||||||||| || ||||| | | ||||||||| | ||||||||||| || ||
Sbjct 1770 TACAAACATGTCTGCCAATACGAAAACTCC-CTTGTGACTAGATTCTACGGTGTTCATTG 1828
Query 1601 TATCAAACCTGTTGGTGGCCAGAAGACTCGGTTTATTGTCATGGGGAACTTATTCTGCTC 1660
| ||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||||
Sbjct 1829 TGTCAAACCTGTTGGTGGCCAAAAGACTCGGTTTATCGTTATGGGAAACTTATTCTGCTC 1888
Query 1661 CGAATATAGAATCCAGAGACGGTTTGACCTGAAAGGGTCTTCCCATGGACGGTAT-ACCT 1719
||| |||||||||||||||||||||||||| ||||||||||| ||||| || || || |
Sbjct 1889 CGAGTATAGAATCCAGAGACGGTTTGACCTCAAAGGGTCTTCTCATGGGCG-TAGCAC-T 1946
Query 1720 CCAAACCC-GAAGGGGAAATTGATGAGACTACTACCCTCAAGGACCTTGATCTCAATTTT 1778
|||| || ||||| |||||||||||||| || || ||||||||||||||||||||||||
Sbjct 1947 GCAAAGCCTGAAGGAGAAATTGATGAGACCACGACTCTCAAGGACCTTGATCTCAATTTT 2006
Query 1779 GCTTTCCGTCTTCAGAGAAATTGGTACCAAGAGCTTATGACGCAAATTAAGTGCGACTGT 1838
||||||||||||||||||| ||||| ||||||||||||| |||||| || |||| |||
Sbjct 2007 TCTTTCCGTCTTCAGAGAAACTGGTATCAAGAGCTTATGAAGCAAATAAAACGCGATTGT 2066
Query 1839 GAGTTCTTGGAAGCTGAGAGAATTATGGATTATAGCCTTTTGGTTGGCGTTCACTTCCGT 1898
|||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct 2067 GAGTTCTTGGAAGCAGAGAGAATAATGGATTATAGCCTTTTAGTTGGTGTTCACTTCCGT 2126
Query 1899 GATGACACCACAGGAGACAAA-ATGGGGCTCTCTCCATTCGTTTTGAGATCTGGTAAGAT 1957
||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||||| |||
Sbjct 2127 GATGACAACACAGGAGA-AAAGATGGGGCTTTCTCCATTCGTTTTGAGATCTGGTAGGAT 2185
Query 1958 AGAGTCGTACCAAAACGAGAAATTTATGCGTGGTTGTCGCTTCTTGGAAGCGGAACTTCA 2017
||| || || || || || ||||| ||||| |||||||||||| | || || ||||||||
Sbjct 2186 AGATTCATATCAGAATGAAAAATTCATGCGCGGTTGTCGCTTCCTAGAGGCAGAACTTCA 2245
Query 2018 AGACATGGACCGCATTTTAGCTGGCAGGAAACCATTGATTC-GATTAGGGGCAAACATGC 2076
|||||||||||| |||||||||||||||||||||| ||| | ||||||| ||||||||||
Sbjct 2246 AGACATGGACCGGATTTTAGCTGGCAGGAAACCATCGAT-CAGATTAGGCGCAAACATGC 2304
Query 2077 CTGCAAGAGCAGAACGAATGGCGAGAAGAAGCGACTATGATCAGTATTCCTCTGGAGG-G 2135
| |||| ||| ||||||||||| | |||||||| | |||||||||||| || ||||| |
Sbjct 2305 CAGCAAAAGCTGAACGAATGGCCCGGAGAAGCGATTTTGATCAGTATTCATCAGGAGGAG 2364
Query 2136 ACCAACTATCTATCTCACGGAGAGGTCTACGAAGTGGTTCTATATTTTGGAATCATTGAC 2195
||| |||| ||| ||||| ||| | |||||||| ||||| || |||||| ||||||||
Sbjct 2365 -CCAGTTATCCATCACACGGTGAGATGTACGAAGTTGTTCTCTACTTTGGAGTCATTGAC 2423
Query 2196 ATATTACAAGATTACGACATAAGCAAGAAGATCGAGCATGCTTACAAGTCTCTACAAGCT 2255
|| || ||||| |||||||||| ||| |||||||||||||| || ||||| || |||||
Sbjct 2424 ATCTTGCAAGACTACGACATAACCAAAAAGATCGAGCATGCGTATAAGTCACTGCAAGCC 2483
Query 2256 GATCCGGCTTCAATCTCAGCCGTTGATCCCAAACTATACTCAA-GAAGGTTCAGAGATTT 2314
||||| ||||| |||||||| |||||||| ||||| || |||| || |||||||||| ||
Sbjct 2484 GATCCTGCTTCGATCTCAGCTGTTGATCCTAAACTCTATTCAAAGA-GGTTCAGAGACTT 2542
Query 2315 CATCAGCAGAATCTTCATCGAAGACGGCTAA 2345
|||||| || |||||||| ||||| ||||||
Sbjct 2543 CATCAGTAGGATCTTCATTGAAGAGGGCTAA 2573
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127424035220
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5