BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477022
Length=3046
Score E
Sequences producing significant alignments: (Bits) Value
AT1G78580.1 | Symbols: ATTPS1, TPS1 | trehalose-6-phosphate syn... 2819 0.0
AT4G27550.1 | Symbols: ATTPS4, TPS4 | trehalose-6-phosphatase s... 612 7e-174
AT1G17000.1 | Symbols: ATTPS3, TPS3 | trehalose-phosphatase/syn... 472 1e-131
AT1G78570.1 | Symbols: RHM1, ROL1, ATRHM1 | rhamnose biosynthes... 126 1e-27
> AT1G78580.1 | Symbols: ATTPS1, TPS1 | trehalose-6-phosphate synthase
| chr1:29552340-29560912 REVERSE LENGTH=3190
Length=3190
Score = 2819 bits (1526), Expect = 0.0
Identities = 1669/1738 (96%), Gaps = 10/1738 (1%)
Strand=Plus/Plus
Query 1312 aaaaaCTCACAAGCCAAGTTCATGAAATTGTTGGACGCATTAATGGTCGCTTTGGGACAC 1371
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1447 AAAAACTCACAAGCCAAGTTCATGAAATTGTTGGACGCATTAATGGTCGTTTTGGGACAC 1506
Query 1372 TGACTGCTGTTCCAATACATCACCTGGATCGTTCTCTGGACTTTTATGCTTTATGTGCCC 1431
||||||| |||||||||||||| |||||||| |||||||||||| ||||||||||||| |
Sbjct 1507 TGACTGCAGTTCCAATACATCATCTGGATCGGTCTCTGGACTTTCATGCTTTATGTGCAC 1566
Query 1432 TTTATGCCGTCACAGATGTTGCACTTGTCACATCTTTGAGAGATGGGATGAATCTTGTCA 1491
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1567 TTTATGCCGTCACAGATGTTGCGCTTGTAACATCTTTGAGAGATGGGATGAATCTTGTCA 1626
Query 1492 GTTATGAGTTTGTTGCTTGCCAAGAGGCCAAAAAGGGGGTCCTCATTCTCAGTGAATTTG 1551
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1627 GTTATGAGTTTGTTGCTTGCCAAGAGGCCAAAAAGGGCGTCCTCATTCTCAGTGAATTTG 1686
Query 1552 CAGGTGCTGCACAGTCTCTGGGTGCTGGAGCTATTCTTGTGAATCCTTGGAACATTACAG 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1687 CAGGTGCTGCACAGTCTCTGGGTGCTGGAGCTATTCTTGTGAATCCTTGGAACATCACAG 1746
Query 1612 AAGTTGCTGCCTCCATTGGACAGGCCCTAAACATGACAGCTGAAGAAAGAGAGAAAAGAC 1671
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1747 AAGTTGCTGCCTCCATTGGACAAGCCCTAAACATGACAGCTGAAGAAAGAGAGAAAAGAC 1806
Query 1672 ATCGGCATAATTTTCATCATGTCAAAACTCACACTGCTCAAGAATGGGCTGAAACTTTTG 1731
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1807 ATCGCCATAATTTTCATCATGTCAAAACTCACACTGCTCAAGAATGGGCTGAAACTTTTG 1866
Query 1732 TCAGTGAACTAAATGACACTGTAATTGAGGCACAACTACGAATTAGTAAAGTCCCACCTG 1791
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1867 TCAGTGAACTAAATGACACTGTAATTGAGGCGCAACTACGAATTAGTAAAGTCCCACCAG 1926
Query 1792 AGCTTCCACAGCATGATGCAATTCAACGGTATTCAAAGTCCAACAACAGGCTACTGATCC 1851
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1927 AGCTTCCACAGCATGATGCAATTCAACGGTATTCAAAGTCCAACAACAGGCTTCTAATCC 1986
Query 1852 TGGGTTTCAATGCAACATTGACTGAACCAGTAGATAATCAAGGGAGAAGAGGTGATCAAA 1911
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1987 TGGGTTTCAATGCAACATTGACTGAACCAGTGGATAATCAAGGGAGAAGAGGTGATCAAA 2046
Query 1912 TAAAGGAGATGGATCTTAATCTACACCCTGAGC-TAAAAGGCCCGTTAAAGGCATTATGC 1970
||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||
Sbjct 2047 TAAAGGAGATGGATCTTAATCTACACCCTGAGCTTAAAGGGCCC-TTAAAGGCATTATGC 2105
Query 1971 AGTGATCCAAGTACAACCATAGTTGTCCTCAGCGGAAGCAGCAGAAGCGTTTTGGACAAA 2030
|||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct 2106 AGTGATCCAAGTACAACCATAGTTGTTCTGAGCGGAAGCAGCAGAAGTGTTTTGGACAAA 2165
Query 2031 AACTTTGGAGAGTATGATATGTGGTTAGCTGCCGAAAATGGGATGTTCCTAAGGCTGACA 2090
||||||||||||||||| |||||| | || || ||||||||||||||||||||||| ||
Sbjct 2166 AACTTTGGAGAGTATGACATGTGGCTGGCAGCAGAAAATGGGATGTTCCTAAGGCTTACG 2225
Query 2091 AATGGAGAGTGGATGACTACAATGCCAGAACACTTGAACATGGAATGGGTTGATAGCGTA 2150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2226 AATGGAGAGTGGATGACTACAATGCCAGAACACTTGAACATGGAATGGGTTGATAGCGTA 2285
Query 2151 AAGCATGTTTTCAAGTACTTCACTGAGAGAACTCCCAGGTCACACTTTGAAACACGCGAT 2210
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2286 AAGCATGTTTTCAAGTACTTCACTGAGAGAACTCCCAGGTCACACTTTGAAACTCGCGAT 2345
Query 2211 ACTTCACTTATTTGGAACTACAAATATGCAGATATCGAATTCGGGAGAATTCAAGCAAGA 2270
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2346 ACTTCGCTTATTTGGAACTACAAATATGCAGATATCGAATTCGGGAGACTTCAAGCAAGA 2405
Query 2271 GATTTGTTACAACACTTATGGACAGGTCCAATCTCAAATGCATCAGTTGATGTTGTCCAA 2330
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2406 GATTTGTTACAACACTTATGGACAGGTCCAATCTCTAATGCATCAGTTGATGTTGTCCAA 2465
Query 2331 GGAAGCCGCTCTGTGGAAGTCCGTGCAGTTGGTGTCACAAAGGGAGCGGCAATCGATCGC 2390
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 2466 GGAAGCCGCTCTGTGGAAGTCCGTGCAGTTGGTGTCACAAAGGGAGCTGCAATTGATCGT 2525
Query 2391 ATTCTAGGCGAGATAGTGCATAGCAAGTCGATGACCACACCGATAGATTACGTCTTGTGC 2450
|||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct 2526 ATTCTAGGAGAGATAGTGCATAGCAAGTCGATGACTACACCAATCGATTACGTCTTGTGC 2585
Query 2451 ATTGGTCATTTCTTGGGGAAGGACGAAGATGTTTACACTTTCTTCGAACCAGAACTTCCA 2510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2586 ATTGGTCATTTCTTGGGGAAGGACGAAGATGTTTACACTTTCTTCGAACCAGAACTTCCA 2645
Query 2511 TCCGACATCCCAGCCATTGCACGAGCCAAACCATCATCTGAGAGTGGAACCAAGTCATCA 2570
|||||||| ||||||||||||||| ||| |||||||||||| |||||| |||||||||||
Sbjct 2646 TCCGACATGCCAGCCATTGCACGATCCAGACCATCATCTGACAGTGGAGCCAAGTCATCA 2705
Query 2571 TCAGGAGACCGAAGACCGCCTTCAAAGTTGACACATAACAACAACAAAAGTGGATCAAAA 2630
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 2706 TCAGGAGACCGAAGACCACCTTCAAAGTCGACACATAACAACAACAAAAGTGGATCAAAA 2765
Query 2631 TCTTCATCATCCTCTAACTCTAACAACAACAACAAGTCCTCACAGAGATCTCTCCAGTCA 2690
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2766 TCCTCATCATCCTCTAACTCTAACAACAACAACAAGTCCTCACAGAGATCTCTTCAGTCA 2825
Query 2691 GAGAGAAAAAGTGGATCCAACCATAGTTTAGGAAACTCAAGACGTCCTTCACCAGAGAAG 2750
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2826 GAGAGAAAAAGTGGATCCAACCATAGCTTAGGAAACTCAAGACGTCCTTCACCAGAGAAG 2885
Query 2751 ATCTCATGGAATGTACTTGACCTCAAAGGAGAGAACTACTTCTCTTGCGCCGTGGGCCGT 2810
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 2886 ATCTCATGGAATGTGCTTGACCTCAAAGGAGAGAACTACTTCTCTTGCGCTGTGGGTCGT 2945
Query 2811 ACTCGCACCAATGCTAGATATCTCCTTGGCTCACCTGACGACGTTGTTTGCTTCCTTGAG 2870
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2946 ACTCGCACCAATGCTAGATATCTCCTTGGCTCACCTGACGACGTCGTTTGCTTCCTTGAG 3005
Query 2871 AAGCTCGCTGACACGACGACGTC-TGCACCTTAATATCCCGAGACGGTGTCAAGTGAGTT 2929
|||||||||||||| | || || | ||||||||||||||||||| ||||||||||||||
Sbjct 3006 AAGCTCGCTGACAC--C-ACTTCCT-CACCTTAATATCCCGAGACAGTGTCAAGTGAGTT 3061
Query 2930 GATGTAACCCAATAAAAACTATTGTTTTGTAACAAAAAGCAGCCATTACCAGACTCTTTT 2989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3062 CATGTAACCCAATAAAAACTATTGTTTTGTAACAAAAAGCAGCCATTACCAGACTCTTT- 3120
Query 2990 AGTGGTTTGATTCTTATAAAATAAGAGTAGAGCAACTTATGACA-AAATTGTGAACAA 3046
|||||||||||||| ||| ||||||||||||||||||||||||| |||| | ||||||
Sbjct 3121 AGTGGTTTGATTCTAATATAATAAGAGTAGAGCAACTTATGACACAAAT-GAGAACAA 3177
Score = 2078 bits (1125), Expect = 0.0
Identities = 1219/1266 (96%), Gaps = 0/1266 (0%)
Strand=Plus/Plus
Query 7 GTGTTTTGGTTCTGTTTTGGTGTGAGCGTATGCCTGGAAATAAGTACAACTGTAGTTCTT 66
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 178 GTGTTTTGGTTCTGTTTTGGTGTGAGCGTATGCCTGGAAATAAGTACAACTGCAGTTCTT 237
Query 67 CTCATATCCCACTCTCTCGAACAGAACGCCTCTTgagagatagagagctcagagagaaga 126
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 238 CTCATATCCCACTCTCTCGAACAGAACGCCTCTTGAGAGATAGAGAGCTTAGAGAGAAGA 297
Query 127 ggaagagCAACCGAGCTCGTAATCCTAATGACATTGCTGGCAGTTCCGACAACTCTGAGA 186
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 298 GGAAGAGCAACCGAGCTCGTAATCCTAATGACGTTGCTGGCAGTTCCGAGAACTCTGAGA 357
Query 187 ACGACCTGCGTTTAGAAGGAGACAGTTCAAGGCAATATGTTGAACAGTACTTGGAAGGTG 246
| ||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct 358 ATGACTTGCGTTTAGAAGGTGACAGTTCAAGGCAGTATGTTGAACAGTACTTGGAAGGGG 417
Query 247 CTGCTGCTGCAATGGCCCACGATGATGCGTGTGAGAGGCAAGAAGCTAGGCCTTATAACA 306
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |
Sbjct 418 CTGCTGCTGCAATGGCGCACGATGATGCGTGTGAGAGGCAAGAAGTTAGGCCTTATAATA 477
Query 307 GGCAACGGCTTCTTGTAGTGGCTAACAGGCTCCCAGTTTCTGCCGTGCGAAGAGGTGAAG 366
||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 478 GGCAACGACTACTTGTAGTGGCTAACAGGCTCCCAGTTTCTGCCGTGAGAAGAGGTGAAG 537
Query 367 ATTCATGGTCTCTCGAGATCAGTGCTGGTGGTCTAGTTAGTGCTCTCTTAGGTGTTAAGG 426
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 538 ATTCATGGTCTCTTGAGATCAGTGCTGGTGGTCTAGTCAGTGCTCTCTTAGGTGTAAAGG 597
Query 427 AATTTGAGGCTAGATGGATTGGATGGGCTGGAGTAAATGTGCCTGATGAGGTTGGACAGA 486
|||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 598 AATTTGAGGCCAGATGGATAGGATGGGCTGGAGTTAATGTGCCTGATGAGGTTGGACAGA 657
Query 487 AGGCACTTAGCAAAGCTTTGGCTGAGAAGCGGTGTATACCCGTGTTCCTTGATGAAGAGA 546
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 658 AGGCACTTAGCAAAGCTTTGGCTGAGAAGAGGTGTATTCCCGTGTTCCTTGATGAAGAGA 717
Query 547 TTGTTCATCAGTACTATAATGGTTATTGCAACAATATTCTGTGGCCTCTGTTTCACTACC 606
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 718 TTGTTCATCAGTACTATAATGGTTACTGCAACAATATTCTGTGGCCTCTGTTTCACTACC 777
Query 607 TTGGACTTCCACAAGAAGATCGGCTTGCTACAACCAGAAGCTTTCAGTCCCAATTTGCTG 666
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 778 TTGGACTTCCGCAAGAAGATCGGCTTGCCACAACCAGAAGCTTTCAGTCCCAATTTGCTG 837
Query 667 CATACAAGAAGGCAAATCAAATGTTCGCTGATGTTGTAAATGAACACTATGAAGAGGGAG 726
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 838 CATACAAGAAGGCAAACCAAATGTTCGCTGATGTTGTAAATGAGCACTATGAAGAGGGAG 897
Query 727 ATGTCGTCTGGTGTCATGACTATCATCTTATGTTCCTTCCTAAATGCCTTAAAGAATACA 786
||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 898 ATGTCGTCTGGTGCCATGACTATCATCTTATGTTCCTTCCTAAATGCCTTAAGGAGTACA 957
Query 787 ATAGTAAGATGAAAGTTGGATGGTTTCTCCATACACCATTCCCTTCGTCTGAGATACACA 846
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 ACAGTAAGATGAAAGTTGGATGGTTTCTCCATACACCATTCCCTTCGTCTGAGATACACA 1017
Query 847 GGACGCTTCCATCACGATCAGAGCTCCTTCGCTCAGTTCTTGCTGCTGATTTAGTTGGCT 906
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 GGACACTTCCATCACGATCAGAGCTCCTTCGCTCAGTTCTTGCTGCTGATTTAGTTGGCT 1077
Query 907 TCCATACATATGACTATGCAAGGCACTTTGTGAGTGCATGCACTCGTATTCTTGGACTTG 966
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1078 TCCATACATATGACTATGCAAGGCACTTTGTGAGTGCGTGCACTCGTATTCTTGGACTTG 1137
Query 967 AAGGAACACCTGAGGGAGTTGAGGATCAAGGCAGGCTCACACGCGTAGCTGCTTTTCCAA 1026
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1138 AAGGAACACCTGAGGGAGTTGAGGATCAAGGCAGGCTCACTCGTGTAGCTGCTTTTCCAA 1197
Query 1027 TTGGCATAGATTCTGAGAGGTTTATACGAGCACTTGAGGTCCCTGACGTCATACAACACA 1086
|||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||
Sbjct 1198 TTGGCATAGATTCTGATCGGTTTATACGAGCACTTGAGGTCCCCGAAGTCATACAACACA 1257
Query 1087 TGAAGGAATTGAAAGAAAGATTTGCTGGAAGAAAGGTGATGTTAGGTGTTGATCGACTTG 1146
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1258 TGAAGGAATTGAAAGAAAGATTTGCTGGCAGAAAGGTGATGTTAGGTGTTGATCGTCTTG 1317
Query 1147 ATATGATCAAAGGGATTCCACAAAAGATTCTGGCATTTGAAAAATTTCTCGAGGAAAATG 1206
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1318 ACATGATCAAAGGGATTCCACAAAAGATTCTGGCATTCGAAAAATTTCTCGAGGAAAATG 1377
Query 1207 CAAGCTGGCGTGATAAAGTGGTGTTATTGCAAATTGCGGTGCCAACAAGAACAGACGTTC 1266
||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1378 CAAACTGGCGTGATAAAGTGGTCTTATTGCAAATTGCGGTGCCAACAAGAACTGACGTTC 1437
Query 1267 CTGAGT 1272
||||||
Sbjct 1438 CTGAGT 1443
> AT4G27550.1 | Symbols: ATTPS4, TPS4 | trehalose-6-phosphatase
synthase S4 | chr4:13755649-13759740 FORWARD LENGTH=2428
Length=2428
Score = 612 bits (331), Expect = 7e-174
Identities = 735/923 (80%), Gaps = 56/923 (6%)
Strand=Plus/Plus
Query 363 GAAGATTCATGGTCTCTCGA-GATCAGTGCTGGTGGTCTAGTTAGTGCTC-TCTTAGGTG 420
||||| || |||||| || | ||| ||| ||||||||||||||||||||| || |||||
Sbjct 104 GAAGAGTCTTGGTCTTTC-ACGATGAGTCCTGGTGGTCTAGTTAGTGCTCTTC-TAGGT- 160
Query 421 TT-AAGGAATTTGAGGCTAGATGGATTGGATGGGCTGGAGTAAATGTGCCTGATGAGGTT 479
|| || ||||||||| | | ||||||||||||| |||||||| |||| | ||||| | ||
Sbjct 161 TTGAAAGAATTTGAGACCAAATGGATTGGATGGCCTGGAGTAGATGTTCATGATGCGATT 220
Query 480 GGAC-AGAAGGCACT-TAGCA-AAGCTTTGGCTGAGAAGCGG-TGTATACCC-GTGTTCC 534
|| | | ||| |||| | || | | | ||||| ||| || ||||| ||| |||||
Sbjct 221 GG-CAAAAAGACACTCT-CCATTA-CCCTAGCTGAAAAG-GGATGTAT-CCCAGTGTT-T 274
Query 535 TTGATGAAGAGATTGT-TCATCAGTACTATAATGGTTATTGCAACAATATTCTGTGGCCT 593
||| ||||| | ||| | |||| ||||||||||| || ||||||||||||||||||||
Sbjct 275 TTG--GAAGA-AGTGTGTGATCAATACTATAATGGCTACTGCAACAATATTCTGTGGCCG 331
Query 594 CTGTTTCACTACCTT-GG-ACTTCCACAAGAAGATCGGCTTGCTACAACCAGAAGC-TTT 650
| |||||||| ||| || || |||| |||| |||| | | |||||| || | |
Sbjct 332 ATTTTTCACTA-CTTGGGAAC-GCCACCAGAATATCGTAACGATGCAACCATAA-CATAC 388
Query 651 CAGTCCCAATTTGCTGCATACAAGAAGGCAAATCAAATGTTCGCTGATGTTGT-AAATGA 709
||||| || | || ||||||||||| ||||||||||| ||| ||||||||| ||| ||
Sbjct 389 CAGTCACAGTATGAAGCATACAAGAAAGCAAATCAAATTTTCTTTGATGTTGTCAAA-GA 447
Query 710 ACACTATGAAGAGGGAGATGTCGTCTGGTGTCATGACTATCATCTTATG-TTCCTTCCTA 768
||||||||||| |||||||| || ||||| ||||| |||||| ||||| || ||||||
Sbjct 448 GCACTATGAAGAAGGAGATGTGGTTTGGTGCCATGATTATCATGTTATGCTT-CTTCCTC 506
Query 769 AATGCCTTAAAGAATACAATAGTAAGATGAAAGTTGGATGGTTTCTCCATACACCATTCC 828
||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 507 AATATCTTAAGGAATACAACAGTAAGATGAAAGTTGGATGGTTTCTCCATACACCATTTC 566
Query 829 CTTCGTCTGAGATACACAGGACGCTT-CCATCACGATCAGAGCTCCTTCGCTCAGTTCTT 887
|||| || ||||| ||| || || || || ||||| || || ||||| || ||||||
Sbjct 567 CTTCTTCCGAGATGTACAAAACA-TTGCCCTCGCGATCCGATCTGCTTCGTTCTGTTCTT 625
Query 888 GCTGCTGATTTAGTTGGCTTCCATACATATGACTAT-GCAAGGCACTTTGTGAGTGCATG 946
|||||||||||||||| |||||||| ||||||| | ||||| || ||| ||| ||||||
Sbjct 626 ACTGCTGATTTAGTTGGTTTCCATACCTATGACT-TCGCAAGACATTTTTTGAATGCATG 684
Query 947 CAC-TCGTATTCTTGGACTTGAAGGAACACCTGAGGGAGTTGAGGATCAAGGCAG-GCTC 1004
|| | ||||||||||| | |||| |||| |||| ||| ||| |||||| |||| | ||
Sbjct 685 CATGT-GTATTCTTGGAGTCGAAGCAACATCTGAAGGAATTGTGGATCAGGGCAAAG-TC 742
Query 1005 ACACGCGTAGCTGCTTTTCCAATTGGCATAGATTCTGAGAGGTTTATACGAGCACT--TG 1062
|| || ||||||| |||||| ||||| ||||| |||||||||||||| | ||| ||
Sbjct 743 ACTCGAGTAGCTGTTTTTCCCATTGGGATAGAACCTGAGAGGTTTATAA-A-CACAAGTG 800
Query 1063 AGGTCCCTGACGTCATACAACACATGAAGGAA-TTGAAAGAAAGATTT-GCTGGAAGAAA 1120
| || |||| || | ||| |||||||| || || ||| || ||||| | ||| |||||
Sbjct 801 AACTCTCTGAAGTTGTTCAATACATGAAG-AAGTTCAAA-AACGATTTTGGTGGGAGAAA 858
Query 1121 GGTGATGTTAGGTGTTGATCGACTTGATATGATCAAAGGGATTCCACAAAAGAT-TCTGG 1179
| |||| |||||||||||||| || |||| ||||||||||||||||||||| || || ||
Sbjct 859 GTTGATATTAGGTGTTGATCGTCTCGATACGATCAAAGGGATTCCACAAAA-ATATCAGG 917
Query 1180 CATTTGAAAAATTTCTC-GAGGAAAATGCA-AGCTGGCGTGATAAAGTGGTGTTA-TTGC 1236
||||||| || || || |||||||||||| || ||||||| |||||| ||||| || |
Sbjct 918 CATTTGAGAAGTT-CTTAGAGGAAAATGCAGAG-TGGCGTGGTAAAGTCATGTTACTT-C 974
Query 1237 AAATTGCGGTGCCAACAAG-AAC 1258
| ||||| ||||||||||| |||
Sbjct 975 AGATTGCAGTGCCAACAAGGAAC 997
> AT1G17000.1 | Symbols: ATTPS3, TPS3 | trehalose-phosphatase/synthase
3 | chr1:5812728-5816662 FORWARD LENGTH=2352
Length=2352
Score = 472 bits (255), Expect = 1e-131
Identities = 622/794 (78%), Gaps = 45/794 (6%)
Strand=Plus/Plus
Query 498 AAAGCTTTGGCTGAGAA-GCGGTGTATACCC-GTGTTCCTTGATGAAGAGATTGTTCATC 555
||| || ||||||| || | |||||| ||| || |||||| ||| || | || || |||
Sbjct 157 AAATCTCTGGCTGA-AATGAAGTGTAT-CCCTGTATTCCTTAATG-AG-G-TTTTTGATC 211
Query 556 AGTACTATAATGGTTATTGCAACAATAT-TCTGTGGCCTCTGT-TTCACT-ACCTTGGAC 612
| ||||| ||||||||| |||| ||| | ||||||| | | |||| | || | ||||
Sbjct 212 AATACTACAATGGTTATAGCAATGGTATAT-TGTGGCCAAT-TCTTCA-TCACATGGGAC 268
Query 613 TTCCACAAGAAGATCG-GCTTG-CTACAACCAGAAGCTTTC-AGTCCCAATTTGCTGCAT 669
||||||||||| || | | || | |||| || || ||||| | |||||| || |||||
Sbjct 269 TTCCACAAGAATAT-GATCATGAC-ACAATCA-AAACTTTCGAAACCCAATATGATGCAT 325
Query 670 ACAAGAAGGCAAATCAAATG-TTCGCTGATGTTGTAAATGA-ACACTATGAAGAGGGAGA 727
||||||| ||||||| |||| ||| |||||| |||| || | | ||| |||| |||||
Sbjct 326 ACAAGAAAGCAAATCGAATGTTTC-TTGATGTCATAAAAGAGA-ATTATAAAGATGGAGA 383
Query 728 TGTCGTCTGGTGTCATGACTATCATCTTATGTTCCTTCCTAAATGCCTTAAAGAATACAA 787
| | || ||||| || || |||||||| ||||| |||||| ||| |||||||| |||||
Sbjct 384 TATTGTTTGGTGCCAAGATTATCATCTCATGTTTCTTCCTCAATATCTTAAAGAGTACAA 443
Query 788 TAGTAAGATGAAAGTTGGATGGTTTCTCCATACACCATTCCCTTCGTCTGAGATACACAG 847
| ||| || ||||||||||||||||||||| ||||||| ||||| || ||||| | |
Sbjct 444 CAATAAAATCAAAGTTGGATGGTTTCTCCATTCACCATTTCCTTCTTCCGAGATTTATAA 503
Query 848 GACGCTT-CCATCACGATCAGAGCTCCTTCGCTCAGTTCTTGCTGCTGATTTAGTTGGCT 906
|| || || |||||||||||||| ||||| || |||||||| ||||||||| || | |
Sbjct 504 AAC-ATTGCCCTCACGATCAGAGCTTCTTCGTTCGGTTCTTGCAGCTGATTTAATTAGTT 562
Query 907 TCCATACATATGACTATGCAAGGCACTTT-GTGAGTGCATGCACTCGTATTCTTGGACTT 965
| || |||||||| | |||||| || ||| |||| | ||||||| || ||||||||| ||
Sbjct 563 TTCACACATATGATTTTGCAAGACA-TTTCGTGAATACATGCACCCGAATTCTTGGAGTT 621
Query 966 GAAGGAACACCTGAGGGAGTTGAGGATCAAGGCAG-GCTCACACGCGTAGCTGCTT-TTC 1023
|||||||||| ||| ||||||| | ||||||| || | |||| || || | || || |||
Sbjct 622 GAAGGAACACATGAAGGAGTTGTGTATCAAGGAAGAG-TCACTCGAGTGGTTG-TTCTTC 679
Query 1024 CAATTGGCATAGATTCTGAGAGGTTTATACGAGCACT-TGAGGTCCCTGACGTCATACAA 1082
| || || ||| || | | |||||||| | || | | || ||||||| || || |||
Sbjct 680 CCATGGGAATATATCCAAATCGGTTTATAAAAACA-TGTAAGCTCCCTGAAGTAATTCAA 738
Query 1083 CACATGAAGGA-ATTGAAAGAAAGATTTGCTGG-AAGAAAGGTGATGTTAGGTGTTGATC 1140
|| ||||| || || ||||| |||||| |||| || ||||||||| |||||||||||||
Sbjct 739 CAAATGAATGAGCTT-AAAGATAGATTTTCTGGCAA-AAAGGTGATATTAGGTGTTGATC 796
Query 1141 GACTTGATATGATCAAAGGGATTCCACAAAAG-ATTCT-GGCATTTGAAAAATTTCTCGA 1198
| |||||||||||||||||||||||||||||| || || || |||||| |||||||| ||
Sbjct 797 GTCTTGATATGATCAAAGGGATTCCACAAAAGTAT-CTTGG-ATTTGAGAAATTTCTGGA 854
Query 1199 GGAAAATGC-AAGCTGGCGTGATAAAGTGGTGTTATTGCAAATTGCGGTGCCAACAAGAA 1257
|||||| | || ||||| |||||| | ||| || |||||||||| || ||||||||||
Sbjct 855 TGAAAATCCTAAT-TGGCGCGATAAAATTGTGCTAGTGCAAATTGCAGTACCAACAAGAA 913
Query 1258 CA-GACGTTCCTGA 1270
| || || |||||
Sbjct 914 -ATGAAGTCCCTGA 926
> AT1G78570.1 | Symbols: RHM1, ROL1, ATRHM1 | rhamnose biosynthesis
1 | chr1:29549649-29552438 FORWARD LENGTH=2463
Length=2463
Score = 126 bits (68), Expect = 1e-27
Identities = 82/88 (93%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 2960 AACAAAAAGCAGCCATTACCAGACTCTTTTAGTGGTTTGATTCTTATAAAATAAGAGTAG 3019
|||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct 2463 AACAAAAAGCAGCCATTACCAGACTC-TTTAGTGGTTTGATTCTAATATAATAAGAGTAG 2405
Query 3020 AGCAACTTATGACA-AAATTGTGAACAA 3046
|||||||||||||| |||| | ||||||
Sbjct 2404 AGCAACTTATGACACAAAT-GAGAACAA 2378
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 151454000917
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5