BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477094 Length=2477 Score E Sequences producing significant alignments: (Bits) Value AT1G79270.1 | Symbols: ECT8 | evolutionarily conserved C-termin... 3661 0.0 > AT1G79270.1 | Symbols: ECT8 | evolutionarily conserved C-terminal region 8 | chr1:29815506-29819104 FORWARD LENGTH=2531 Length=2531 Score = 3661 bits (1982), Expect = 0.0 Identities = 2357/2525 (93%), Gaps = 77/2525 (3%) Strand=Plus/Plus Query 1 TATAGAATTAATTGTGTTAGTTAATGCCAAATTAAGATTCTCtttttt-tAATAACTTTT 59 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 36 TATAGAATTAATTGTGTTAGTTAATGCCAAATTAAGATTCTCTTTTTTAAAATCACTTTT 95 Query 60 TGAAGAAGCACTTTGAAGAGAGTTGTGTTAAGAATAGATTCCAGATGGAAAAGTTGGCAA 119 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 96 TGAAGAAGCACTTACAAGAGAGTTGTGTTAAGAATAGATTCCAGATGGAAAAGTTGGCAA 155 Query 120 TAAAAGATGTTTT-AGTTTTTTGCCTTGTCGTCTAATCCAACGGTCAATCTTCGTTCATA 178 |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 156 GAAAAGATGTTTTAAG-TTTTTGCCTTGTCGTCTAATCCAACGGTCGATCTTCGTTCATA 214 Query 179 TCAAGAATCC--ATGACGTGGACCATTCTCTTCCCTCCATCTGTACCTCTTCTCAACCTC 236 |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 215 TCAAGAATCCTTATGACGTGGACCATTCTCTTCCCTCCATCTGTACCTCTTCCCAACCTC 274 Query 237 TTTTTTAATTTATTTGCATCTAAAATAAATAAGAAGGATTGCaaaagaaaaaagga-aaa 295 | |||| || |||| |||| |||||||||||||||||||||||||||||||| | ||| Sbjct 275 TATTTT--TTAATTTACATCGAAAATAAATAAGAAGGATTGCAAAAGAAAAAA-TAGAAA 331 Query 296 aaaaaaactctgttcttctttcttcttcttc-t--tcgtaagccatttaccatttcttct 352 ||||| |||||||||||||||||||||||| | |||||||||| |||||||||| | | Sbjct 332 AAAAACTCTCTGTTCTTCTTTCTTCTTCTTCTTCGTCGTAAGCCA-TTACCATTTC-T-T 388 Query 353 ctctctcgtctctctgtttttctttGTTACGTATCTGTACTTTGTTTTCAAACATAAAAA 412 ||| | | |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 389 CTC-C-C-TCTCTCTGTTTTTCTTTGTTGCGTATCTGTACTTAGTTTTCAAACATAAAAA 445 Query 413 TAAAAGATATCTTTTGTTGATG-T-T-TTCTTCTTG----A-AGATTTTCTACAGCTATT 464 ||||| |||||||| | ||||| | | ||||||||| | ||||||||||||||| || Sbjct 446 TAAAACATATCTTTAGCTGATGTTGTCTTCTTCTTGATAAACAGATTTTCTACAGCTTTT 505 Query 465 TTTCTTTTCCTAATTAAATAATTCTTGAGA-ATTTCAAAACCCTCTGCAAAACAGATAAT 523 |||| ||| |||||| |||||||||||||| ||| |||||||||||| |||||||| || Sbjct 506 TTTC-TTT-CTAATTTAATAATTCTTGAGACTTTTTAAAACCCTCTGCGAAACAGATGAT 563 Query 524 TCGAGttttggtttcttcatctgtgttttgattttttcgtctttt-tgtc-t--t--aac 577 ||||||||||||||||||||||||||||||||||||||||||||| | || | | ||| Sbjct 564 TCGAGTTTTGGTTTCTTCATCTGTGTTTTGATTTTTTCGTCTTTTAT-TCTTAGTCAAAC 622 Query 578 acataaatttcttttACTACTTCTTCGTAGATGACTTCTCATGTTCCAAAACATCCTCGT 637 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 623 ACATAAATTTCTTTTACTAC-TCTTCGTAGATGACTTCTCATGTTCCAAAACATCCTCGT 681 Query 638 AAATCCATTGAAGATATGGTGAAGAATCTTAAAGTGGATCCTCTTGCTAAGGTCACTGCC 697 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 682 AAATCCTTTGAAGATATGGTGAAGAATCTTAAAGTGGATCCTCTTGCTAAGGTCACTGCC 741 Query 698 TCCACCACTTCCATGGTTTCTGCAAAAGAGAATAAGAATCAGT------CAGAGCCATCA 751 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 742 TCCACCACTTCCATGGTTTCTGCAAAAGAGAATAAGAATCAGTCAGAGGCAGAGCCATCA 801 Query 752 TATTATGAAACTCTTGAGACATATCAAGGCCTGCCTTGTCCTTATGGAGGCTACTATGGA 811 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 802 TATTATGAAACTCTTGAGACATATCAAGGCCTGCCTTGTCCTTATGGTGGCTACTATGGA 861 Query 812 TTCTACTATCCAGGTCTTGACGGTTCAGTTGGAGAAGCAAAGGATAATGGATACTATGGT 871 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 862 TACTACTATCCAGGTCTTGATGGTTCAGTTGGAGAAGCAAAGGATAATGGATACTATGGT 921 Query 872 TATGGAACAGAAGTTCAGTACCCGGTTATGCAAGGGGAAAATGGATCTTTGATCTACTTG 931 |||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct 922 TATGGAACAGAAGTTCAGTACCCGGTAATGCAAGGGGAAAATGGGTCTGTGATCTACTTG 981 Query 932 ATGCCAGGGTTTCAATCTTATGATGCTAGTCAAACTTATATGCCTATAAGCCCGGTTGGT 991 |||||||||||||| ||||||||||| || ||||||||||||||||||| |||||||||| Sbjct 982 ATGCCAGGGTTTCAGTCTTATGATGCAAGCCAAACTTATATGCCTATAAACCCGGTTGGT 1041 Query 992 GTTTCTAGTCAAGCACTTCATTCGCCAATGTATGCAGCTCAGGGTTATTACCAGAACCAA 1051 || || |||||||||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct 1042 GTATCGAGTCAAGCACTTCATTCGCCGATGTATGCTGCTCAGGGTTATTATCAGAACCAA 1101 Query 1052 TTTGGTTATGGAGACGTTGCATCGCCGACCTATTTATGGGACCCTGTTGGAGACAAGTAT 1111 |||||||||| ||| ||| ||||||| || ||||||||||||||||||||||||| |||| Sbjct 1102 TTTGGTTATGCAGATGTTTCATCGCCCACATATTTATGGGACCCTGTTGGAGACAGGTAT 1161 Query 1112 GTGTATGGTGTTGCTTCAAATACCCCACCCTTGAAACAGAACATATCTTCTTCAAGTCAT 1171 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1162 GTGTATGGTGTTGCTTCATATACCCCACCCTTGAAACAGAACATATCTTCTTCAAGTCAT 1221 Query 1172 AATCACAACAATTATTACTCAAAGAGCAAGAACTCCTTCACGGGCCACGGCATGGGAGAT 1231 || |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 1222 AACCACAACAATTATTATTCAAAGAGCAAGAACTCCTTCACGGGTCACGGCATGGGAGAT 1281 Query 1232 CGTCCTAAAACACCGCG---A--A--A-A-AACAGCTATGCCCCACTCCCACTGCATAAC 1282 ||||||||||||||||| | | | | |||||||||||||||| |||||||| |||| Sbjct 1282 CGTCCTAAAACACCGCGAAAAGCATCACAGAACAGCTATGCCCCACCCCCACTGCTTAAC 1341 Query 1283 CAAGAAAGAGGAAGAATTGCTTACCCGATGGACCCGGTAAAGAAAAAGTCTGGAGCTTTG 1342 ||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1342 CAAGAAAAAGGTCGCATTGCTTACCCGATGGACCCAGTAAAGAAAAAGTCTGGAGCTTTA 1401 Query 1343 AATCGGGATGAAACAGAGAAGGCGAAAGCGAGGAAC-AAAGAAAATGGTA-ATAGCGTAA 1400 ||||||||||||||||||||||||||||||||| || ||||||||||||| | || | | Sbjct 1402 AATCGGGATGAAACAGAGAAGGCGAAAGCGAGG-ACAAAAGAAAATGGTACA-AGTATGA 1459 Query 1401 ATGACTTAGCAAACGGTCAAGATCATATTACCAATGGAGAATGTGAGTCCTGCTCGTTGG 1460 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 1460 ATGACTTAGCAAACGGTCAAGATCATATTACCAATGGAGAATGTGAGTCATGTTCGTTGG 1519 Query 1461 ATGCTGAAGGGAATGAAAGGAGCAACGGTGTTGGTTCTGTGATCAGAAGGGATCAATATA 1520 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1520 ATGCTGAAGGGAATGAAAGAAGCAACGGTGTTGGTTCTGTGATCAGAAGGGATCAATATA 1579 Query 1521 ACCTCACC-AGCTTTCAGACCAAATACGACGAAGCAATCTTTTTTGTGATAAAATCGTAT 1579 ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1580 ACCTC-CCTAGCTTTCAGACCAAATACGAGGAAGCAATCTTTTTTGTGATAAAATCGTAT 1638 Query 1580 AGCGAAGATGACATACACAAGAGCATTAAGTACAATGTCTGGTCTAGTACTCTCAATGGG 1639 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1639 AGCGAAGACGACATACACAAGAGCATCAAGTACAATGTCTGGTCTAGTACTCTCAATGGG 1698 Query 1640 AACAAGAAGTTAGACAGTGCATATCAAGAATCTCAGAAGA-GGATTGCAGAGAAAAGTGG 1698 |||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||| Sbjct 1699 AACAAGAAGTTAGACAGTGCATATCAAGAATCTCAGAAGAAGGCT-GCAGACAAAAGTGG 1757 Query 1699 AAAGTGCCCAGTTTTCCTATTCTTCTCGGTGAATGCAAGTGGCCAATTCTGCGGTGTAGC 1758 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1758 AAAGTGCCCGGTTTTCCTGTTCTTCTCGGTGAATGCAAGTGGCCAATTCTGCGGTGTAGC 1817 Query 1759 TGAGATGATGGGACGAGTTGATTATGAGAAAAGCATGGAGTTCTGGCAACAAGATAAGTG 1818 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1818 TGAGATGATTGGACGAGTTGATTATGAGAAAAGCATGGAGTTCTGGCAACAAGATAAGTG 1877 Query 1819 GACTGGCTATTTTCCGGTCAAGTGGCACATCATCAAAGATGTTCCAAATCCGCAATTACG 1878 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 1878 GACTGGCTATTTTCCGGTGAAGTGGCACATCATCAAAGATGTTCCAAATCCGCAACTACG 1937 Query 1879 ACATATCATACTAGAGAACAATGAGAACAAGCCTGTTACCAATAGCAGAGACACACAAGA 1938 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1938 ACATATCATACTAGAGAACAATGAGAACAAGCCTGTAACCAATAGCAGAGACACACAAGA 1997 Query 1939 GGTGAGGTTGCCACAAGGGAATGAAGTGTTGAACATCTTCAAGAACTATGCAGCAAAGAC 1998 |||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct 1998 GGTGAGGTTGCCTCAAGGGAATGAAGTGTTGAACATCTTTAAGAACTACGCAGCTAAGAC 2057 Query 1999 ATCTATATTAGATGATTTTGATTTTTATGAAAACAGAGAGAAGGTTATGGTACAGAAGAA 2058 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2058 ATCTATTTTAGATGATTTTGATTTTTATGAAAACAGAGAGAAGGTTATGGTACAGAAGAA 2117 Query 2059 GCTAAGGTTCCCTCCTGTATTAAAGAAGAAAGAAGAAGACTTGGTTGCTGGTTTCAAAAC 2118 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 2118 GCTAAGGTTCCCTCCGGTATTAAAGAAGAAAGAAGAAGACTTGGTTGCTGATTTTAAAAC 2177 Query 2119 AATGGAGATATCTAATACAGTCGA-G-GG-AAACACAGAGTTA-CCGGGGACAGTGAACT 2174 ||||||||| |||||||||||||| | || ||||||||||||| ||||| ||||||| || Sbjct 2178 AATGGAGATGTCTAATACAGTCGAAGAGGGAAACACAGAGTTAACCGGG-ACAGTGAGCT 2236 Query 2175 AACTAGAAGAACATGTAGTGTTTTGGGTTTGGtttttttGTTAAGGATCAATATAAACCG 2234 |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 2237 AACTAGAAGAACATGTAGTGTTTTTGGTTTGGTTTTTT----AAGGATCAATATAAACCG 2292 Query 2235 TCCGATTGTTTCGGATTGCTTTGATTTTATTACAAGCGAGTTGGCTTCTTGTTTTATTGT 2294 |||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||| Sbjct 2293 TCCGATTGTTTCGGATTGCTTTGATTTTATTACAAGCGAGATGGCTTCTTCTTCTATTGT 2352 Query 2295 TTCGTTGTATGGTGTAATGTTGGGTTTTT-CTTCACCtttttttttttGGTTTTGTGAAT 2353 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct 2353 TTCGTTGTATGGTGTAATGTTGGGTTTTTTCTTCAC-TTTTTTTTTTTGGTTTTGTG--T 2409 Query 2354 TTGTGTTTATGATATGTTTTGCAATTTGTAATCATTGGCAAAAATGATAGGGTTTGATTT 2413 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2410 T-GTGTTTATGATATGTTTTGCAATTTGTAATCATTGGCAAAAATGATAGG-TTTGATTT 2467 Query 2414 TATAGTGAAATAAGAAAACCGGGATACAAAAAGAAAAGAGGTTTAGACA-AGAAATGAGT 2472 |||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 2468 TATAGTGATATAAGAAAACCGGGATACAAAAAGAAAAGAGGTTTAGACATA-AAATGAGT 2526 Query 2473 TTCTC 2477 ||||| Sbjct 2527 TTCTC 2531 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 122909010350 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5