BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477103 Length=1728 Score E Sequences producing significant alignments: (Bits) Value AT1G79380.1 | Symbols: | Ca(2)-dependent phospholipid-binding ... 2422 0.0 > AT1G79380.1 | Symbols: | Ca(2)-dependent phospholipid-binding protein (Copine) family | chr1:29860491-29863316 FORWARD LENGTH=1820 Length=1820 Score = 2422 bits (1311), Expect = 0.0 Identities = 1636/1779 (92%), Gaps = 78/1779 (4%) Strand=Plus/Plus Query 1 ATATATAGTTTCAtttttttCT-GGGTTTCG---GTACTCATGTGGGTTCAGTAAATAAA 56 ||||||||||| |||||||||| || ||||| | ||||||||||||||||||||| | Sbjct 1 ATATATAGTTTAATTTTTTTCTAGGTTTTCGTTCGAACTCATGTGGGTTCAGTAAAT--A 58 Query 57 AATGTTTATAAGTCCCCATCTGGCCGCGTCAAAAATAC-TAGAT---AACAATTAGTGGT 112 |||| || |||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 59 AATG-TT-TAAGTCCCCATCTGGCCGCGTCAAAAATACTTAGATAACAACAATTAGTGGT 116 Query 113 TGGCATAGAAAAGTAATGATTGTTGCCGCGTAGAATGAAAATAAT-AAATTAATTAAGAA 171 || ||||||||||||||||||||||||||||||||||||| |||| ||||| || ||||| Sbjct 117 TGACATAGAAAAGTAATGATTGTTGCCGCGTAGAATGAAATTAATAAAATT-ATAAAGAA 175 Query 172 CAGTGAAGCAATAAA--------T---GT-TT------TAGTCTTCTTAAATATTTCAG- 212 ||||||||||||||| | || || ||||||||||||||||| ||| Sbjct 176 CAGTGAAGCAATAAATGTTTCCTTGGCGTCTTGAAGAGTAGTCTTCTTAAATATTCCAGC 235 Query 213 CaaaaaaaaaaaaGATTCTATCCATTATCAAG-G-a-aaaaaaaaTCTGAATTCGAATTC 269 | |||||||||||||||||||||||||||||| | | ||||||||||||||||| ||||| Sbjct 236 CCAAAAAAAAAAAGATTCTATCCATTATCAAGAGAAGAAAAAAAATCTGAATTCCAATTC 295 Query 270 ------G-AG--GAAGAAGAAAGGAGATGACTATGGGGAATTTCTTAAAGAGATTTGGAA 320 | || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 296 GAAGAAGAAGAAGAAGAAGAAAGGAGATGACTATGGGGAATTTCTTAAAGAGATTTGGAA 355 Query 321 GTGGAAAAAGCAGAAGCAGAAGCAGTAGAAGTATGACTCTGGGAACAACGTCGTCTCAAT 380 |||| || | ||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 356 GTGG---AA--A-AAGCAGAAGCAGTAGAAATATGACTCTGGGAACGACGTCGTCTCAAT 409 Query 381 CTCATGAACCATCTCCGTCGGCGGATCCTCCAGTCTCCCTTGCCGATAATATCAACGCCG 440 ||||||||||||| |||| |||||||| || |||||||||||||||||| ||||||| Sbjct 410 CTCATGAACCATCACCGT---CGGATCCTTCACTCTCCCTTGCCGATAATACCAACGCCA 466 Query 441 CCAAGAAGAAGTACGCTCTCATCCCTGACCGCTTCTCCTCCCTCGACCAGGTATCAAAAG 500 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 467 CCAAGAAGAAGTACGCTCTCATCCCTGACCGCTTCTCTTCCCTCGACCAGGTATCAAAAG 526 Query 501 CTCTAAGAGAAGCTGGTCTTGAATCATCCAATCTCATTCTCGGAGTTGATTTCACAAAGA 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 CTCTAAGAGAAGCTGGTCTTGAATCATCCAATCTCATTCTCGGAGTTGATTTCACAAAGA 586 Query 561 GCAACGAGTGGACTGGGAAAACTTCTTTCGATGGAAAATGTCTGCACGCCCTCGGCGAAA 620 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 587 GCAACGAGTGGACTGGGAAAACTTCTTTCGATGGAAAATGTCTGCACGCGCTCGGCGAAA 646 Query 621 CTCCGAATCCATATGAAAAGGCGATTTTTGTAATCGGCCAAACGTTGGCTCCTTTCGACG 680 || |||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 647 CTTCGAATCCATATGAAAAGGCGATTTTTGTAATCGGCCAAACGTTGGCTCCTTTTGATG 706 Query 681 AAGATAATCTCATCCCTTGTTTCGGCTTTGGCGATTCAACAACTCACGACGAGGAAGTGT 740 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 707 AAGACAATCTCATCCCTTGTTTCGGCTTTGGCGATTCAACAACTCATGACGAGGAAGTGT 766 Query 741 TCGGTTTCCATAGCGACAATTCTCCATGTCATGGCTTCGAAGAGGTCTTAGCATGTTACA 800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 767 TCGGTTTCCATAGCGACAATTCTCCATGTCATGGCTTCGAAGAGGTCTTAGCATGTTACA 826 Query 801 GGAGAATTGCACCCAACTTGCGTCTATCAGGGCCAACGTCGTATGGACCGCTCATCGATG 860 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 827 AGAGAATTGCACCCAACTTGCGTCTATCAGGGCCAACGTCGTATGGACCGCTCATCGATG 886 Query 861 CTGC-GATTGACATTGTCGAGAAGAACAACGGACAATTCCATGTTCTGGTGATCGTCGCA 919 |||| | | |||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct 887 CTGCTG-TCGACATTGTGGAGAAGAACAACGGACAATTCCATGTTCTGGTGATTGTTGCA 945 Query 920 GATGGACAGGTAACGAGAGGTACGGATATGGCCGAGGGAGAACTCAGTCAACAAGAGAAA 979 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 946 GATGGACAGGTAACGAGAGGTACGGATATGGCCGAGGGAGAACTCAGTCAACAAGAGAAA 1005 Query 980 TCAACCATCGACGCCATTGTAAATGCAAGCTCGTATGCTTTGTCGATTGTTTTAGTCGGT 1039 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1006 ACAACCATCGACGCGATTGTAAATGCAAGCTCGTATGCTTTGTCGATTGTTTTAGTCGGT 1065 Query 1040 GTTGGAGACGGGCCATGGGAAGACATGAGGAAGTTTGATGACAAGATCCCTAAGCGTGAA 1099 ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 1066 GTTGGAGACGGACCATGGGAAGACATGAGGAAGTTCGATGATAAGATCCCTAAGCGTGAA 1125 Query 1100 TTCGACAACTTTCAGTTTGTGAATTTCACAGAGATTATGACCAGAAACTCACCAGAGTCT 1159 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1126 TTCGACAACTTTCAGTTTGTGAATTTCACAGAGATTATGACGAGAAACTCACCAGAGTCT 1185 Query 1160 GCCAAAGAAACTGCCTTTGCTCTTGCTGCTCTAATGGAGATTCCCTTTCAGTATCAAGCA 1219 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1186 GCCAAAGAAACTGCTTTTGCTCTAGCTGCTCTAATGGAGATTCCCTTTCAGTATCAAGCA 1245 Query 1220 GCCATCGAACTCCGCTTACTCGGGAAACAGACGGGCACAGCTAAGACAATAGTTCCGAGG 1279 |||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| Sbjct 1246 GCCATCGAACTCCGCTTACTCGGGAAGCAGACGGGCTTAGCGAAGACAATAGTTCCGAGG 1305 Query 1280 CCACCACCAACTCCATACACGCCTCCAACTAATGCTGAACTACCATCAACTGCATCACCT 1339 |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1306 CCACCACCAATTCCGTACACACCTCCAACTAATGCTGAACTACCATCAACTGCATCACCT 1365 Query 1340 G-A--AC---AA-A--CCCAGAGTTGCCCGATTTGTCTGACTAACCGAAAAGACGTGGCT 1390 | | || || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1366 GCATCACCTGAACAAACCCAGAGTTGCCCGATTTGTCTGACTAACCGAAAAGACGTGGCT 1425 Query 1391 TTCAGCTGTGGCCACATGACTTGTGGAGATTGCGGATCCAAAATATCAAATTGCCCGATC 1450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1426 TTCAGCTGTGGCCACATGACTTGTGGAGATTGCGGATCCAAAATATCAAATTGCCCGATC 1485 Query 1451 TGCCGAGTACGGATCACGAGCCGCCTAAGGCTTTACACGTGATCAATGCCCACAAAACTT 1510 || |||||| ||||||||| ||| |||| ||||||||| ||||||||| |||| || ||| Sbjct 1486 TGTCGAGTAAGGATCACGAACCGGCTAAAGCTTTACACATGATCAATGGCCACGAA-CTT 1544 Query 1511 TTTC-CTGACCACGGCTTTACACGTGATCAATGCCGACATGCCGAGAAACTTTATTTCTG 1569 ||| |||||||||||||||||||||||||||||| | | | | || |||||| |||| Sbjct 1545 TTTTTCTGACCACGGCTTTACACGTGATCAATGCC-A-A--C--A-AA-CTTTATCTCTG 1596 Query 1570 CACATAACAAAAGGCTTGCATATACTATCCTTCTCCTTTGTAGAATCTACAGTTTGGTTT 1629 ||||||||||| ||||||| ||| || |||||||||||||||||||| |||||||| Sbjct 1597 CACATAACAAATCGCTTGCACATAG---CCATCTCCTTTGTAGAATCTACAATTTGGTTT 1653 Query 1630 GCCAAGTGTTTCTGAGAATGTTCCACAATCAGCATGTACCATGTAATTCCGTATCTACTA 1689 ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||| Sbjct 1654 GCCAAGTGTTTCTGACAATGTTCCACAATCAGCGTGTACCATGTAATTCTGTATGTACTG 1713 Query 1690 TAAAACAGTAACTTTGCAAACAAGAATGAAGAAGCAATG 1728 ||||||| ||||||||||||||||||||||||||||||| Sbjct 1714 TAAAACATTAACTTTGCAAACAAGAATGAAGAAGCAATG 1752 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85441327590 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5