BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477244 Length=1352 Score E Sequences producing significant alignments: (Bits) Value AT1G80130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 1831 0.0 > AT1G80130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:30140961-30142646 REVERSE LENGTH=1375 Length=1375 Score = 1831 bits (991), Expect = 0.0 Identities = 1258/1381 (91%), Gaps = 42/1381 (3%) Strand=Plus/Plus Query 1 ATATATACACTTATCTTTTACTGTCTAAA-TTAACTAGGCGGCTTACCATTATATAAAGA 59 ||||||||||||||||||||| ||||||| |||| || ||||||||||||||||| |||| Sbjct 5 ATATATACACTTATCTTTTACAGTCTAAATTTAATTATGCGGCTTACCATTATAT-AAGA 63 Query 60 CTCTAGAAGGCTACTCTCA-T-TATACATTATCTAG-TACTCATAAGTGGTTCTTGTTTA 116 |||| | || ||||||||| | |||||||||| || |||| || ||||||||||||||| Sbjct 64 CTCTGGTAGACTACTCTCATTATATACATTATAAAGATACTGATGAGTGGTTCTTGTTTA 123 Query 117 ATGGAGTTTTTAATTT-AAAATATTTGGTAACCGAGTGGATCATCATGTTATTGAGAAGC 175 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 124 ATGGAGTTTTAAATTTAAAAATATTTGGTAACCGAGTGGATCATCATGTTATTGAGAAGC 183 Query 176 ACATCTGCTCCGATTCTGAACTCGTGGCTTCCACAACACTGCTCCAGAGAATCGTCTCCG 235 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 184 ACATCTGCTCCGATACTGAACTCGTGGCTTCCACAACACTGCTCGAGAGAATCGTCTCCG 243 Query 236 GAGCCGGAGTCACAGCTCCAGCGCAGGTCAAGATCGTTGTCTCTTTTCTCATCAAAGTCA 295 || ||||||||||||||| |||| |||||| ||| ||||||||||||||||||||||| Sbjct 244 GAACCGGAGTCACAGCTCTGGCGCCGGTCAACATCATTGTCTCTTTTCTCATCAAAGTCC 303 Query 296 ATAGATGGACACACTGGGGAGGTGTTGCATCAAGCTCTCTCCGACCACAAGGAG---AGT 352 ||||||||||||||||||||| | |||| ||||||||||| ||| |||||||| | | Sbjct 304 ATAGATGGACACACTGGGGAGCAGCTGCACCAAGCTCTCTCTGACAACAAGGAGATTATT 363 Query 353 GTTCTTAAATCAAACAGCAGCGAGCACAGCTATAAAACTCCAACATCAAGCAGGCAACGC 412 ||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 364 ATTCTTAAATCAAAAAGCAACGAGCACAGCTACAAAACTCCAACATCAAGCAGGCAACGC 423 Query 413 AGGTCATCTTTAGATGAAACACGCTATACaaaaaaaaCTTTGGATCGGTCGTCACCTTTC 472 |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct 424 AGGTCATCTTTAGATGAAACACGCTACACAAAAAAGACTTTGGATCGGTCATCACCTTTC 483 Query 473 TTAGTGGAGAGGCTCTTCTCGAGCTCTGGACTGGGAGACAAGGCCAGTAGTGATGATCGT 532 ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| Sbjct 484 TTAGTGGAGAGGCTCTTCTCGAGCTCTGGACAGGGAGATAAGGCCAGTAGTAATGATCGT 543 Query 533 CTGGAGACTCTTGTTAGTGGTGGTGGTGGCGGGATGGGAAGCAGCGGCGGCAAGATTTGT 592 |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 544 CTGGAGACTCTTGTGAGTGGTGGTGGTGGCGGGATGGGAGGCAGCGGCGGCAATATTTGT 603 Query 593 -TC--TGGCGGTGGTGTGGGTGGAAGTGGTATTGACGGCGGTGGGAGTGAGGACGCTACC 649 | ||||||||||| |||||||||||| | ||||||||| ||||||||||||||||| Sbjct 604 AACGGCGGCGGTGGTGTCGGTGGAAGTGGTGTGGACGGCGGTAGGAGTGAGGACGCTACC 663 Query 650 GATACGTATTACAAGGAGATGATCGACTCGAGTCCAGGAAACTCGCTTTTGACTGGAAAC 709 || ||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct 664 GACACGTATTACCGGGAGATGATCGACTCGAATCCAGGAAACTCGCTTTTGACCGGAAAC 723 Query 710 TACGCCAAGTTCTTGAAAGAGGTGAAAGGAGACATGAAGAAAGCAGAAGAGTATTGTGAA 769 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 724 TACGCCAAGTTCTTGAAAGAGGTGAAAGGAGACATGAAAAAAGCAGAAGAGTATTGTGAA 783 Query 770 AGAGCAATTTTGGGGAACACCAACGATGGAAACGTTCTATCTCTCTATGCTGATCTCATT 829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 784 AGAGCAATTTTGGGGAACACCAACGATGGAAACGTTCTATCTCTCTATGCTGATCTCATT 843 Query 830 TTGCACAACCACCGAGATCGTCAAAGAGCCCACTCTTACTATCAGCAAGCCGTCAAAATG 889 ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 844 TTGCACAACCATCAAGATCGTCAAAGAGCCCACTCTTACTATAAGCAAGCCGTCAAGATG 903 Query 890 TCCCCGGAAGATTGCTATGTGCAAGCTTCATACGCAAGGTTTCTGTGGGATGTGGAAGAG 949 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 904 TCCCCGGAAGATTGTTATGTGCAAGCTTCATACGCAAGGTTTCTGTGGGATGTGGATGAG 963 Query 950 GACGAAGA---TGAAG-----G-AGAAGAAGAAGAGCAAAG-GAGTGATGAAACTGGCCA 999 |||||||| ||||| | ||||||||||||| || |||||||||||||||||| Sbjct 964 GACGAAGAAGATGAAGCATTAGGAGAAGAAGAAGAG-AACTTGAGTGATGAAACTGGCCA 1022 Query 1000 TGTGCCTCCAACTACCATCTTCCGTGATTTTCCCCAACACACTTCTATTACCGCATCATC 1059 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1023 TGTGCCTCCAACTACCATGTTCCGTGATTTTCCCCAACACACTTCTATTACCGCATCATC 1082 Query 1060 CTAAGACACATATATGTACACCTTCGTGAGTGTTCGCATTTAAATAAATAACATATATAG 1119 ||||||||||||| | |||||||||||| |||||| ||||| |||||||||||||||| Sbjct 1083 CTAAGACACATAT--GAACACCTTCGTGAATGTTCGTATTTAGGTAAATAACATATATAG 1140 Query 1120 AAGCATGTTTAATACACATATTTAAATGCAATATGCGTGTATAATATATGTTAAGAATCT 1179 |||||| ||||||||||||| | ||||||||||||||||||||||||||||| ||||||| Sbjct 1141 AAGCATATTTAATACACATACTCAAATGCAATATGCGTGTATAATATATGTTCAGAATCT 1200 Query 1180 TTGTATATGTTCTGTAGTCTTTACTCTTTATAATATGGATATGTACTGCTATTTGCAGTA 1239 ||||||||||||||||||||| | |||||| || |||||||| ||||||||||| Sbjct 1201 TTGTATATGTTCTGTAGTCTT--C-----ATAATAAGGGTATGTACTTATATTTGCAGTA 1253 Query 1240 TATATGTGTTCTTTTTGTATTGTAAA-T--GAAACTTACCC-TGTTCCTATCGAGATAGA 1295 | ||||||| ||||||||||| |||| | ||||||||||| ||| |||||||||||||| Sbjct 1254 TTTATGTGT-CTTTTTGTATTATAAAGTATGAAACTTACCCATGT-CCTATCGAGATAGA 1311 Query 1296 CAAAATATTAGGCAGATGTTTGCTGAAA----GTATGATGGAATTGATGATACAGATCGA 1351 |||||||||||||| |||||| | ||| |||||||| ||||||||||||||||||| Sbjct 1312 CAAAATATTAGGCATTTGTTTGTTAAAAAAAAGTATGATGAAATTGATGATACAGATCGA 1371 Query 1352 T 1352 | Sbjct 1372 T 1372 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66565922670 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5