BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477417
Length=2044
Score E
Sequences producing significant alignments: (Bits) Value
AT3G01120.1 | Symbols: MTO1, CGS, ATCYS1, CGS1 | Pyridoxal phos... 3271 0.0
AT1G33320.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent t... 817 0.0
> AT3G01120.1 | Symbols: MTO1, CGS, ATCYS1, CGS1 | Pyridoxal phosphate
(PLP)-dependent transferases superfamily protein | chr3:38759-41932
REVERSE LENGTH=2234
Length=2234
Score = 3271 bits (1771), Expect = 0.0
Identities = 1959/2047 (96%), Gaps = 24/2047 (1%)
Strand=Plus/Plus
Query 1 GCACCTCTAAA-C-C--ACAAagagaga-ag-agagaa-gagagaATCATT--GAAACG- 50
||||||||||| | | ||||| ||||| || |||||| |||||||||||| ||||||
Sbjct 1 GCACCTCTAAACCACAAACAAAAAGAGAGAGAAGAGAACGAGAGAATCATTGAGAAACGA 60
Query 51 -A-AACAATGGCCGTCTCATCATTCCAGTGCCCTACGATCTTCTCCTCATCCTCCATCTC 108
| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 61 AACAACAATGGCCGTCTCATCATTCCAGTGCCCTACCATCTTCTCCTCCTCCTCAATCTC 120
Query 109 CGGCTTTCAATGCCGTTCTGATCCAGATCTCGTCGGTTCTCCCGTTGGTGGATCATCTCG 168
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 121 CGGCTTTCAATGCCGTTCTGATCCAGATCTCGTCGGTTCTCCCGTCGGTGGATCATCTCG 180
Query 169 CCGCCGTGTCAATGCCACCGCCGGGATTTCTTCCTCATTCACCGGAGACGGTGGATTATC 228
||| |||||| ||||| |||||||||||||||||||||||||||| |||| |||||||||
Sbjct 181 CCGTCGTGTCCATGCCTCCGCCGGGATTTCTTCCTCATTCACCGGGGACGCTGGATTATC 240
Query 229 CTCCAGGATCTTGAGATTTCCTCCTAATTTCGTCCGTCAGCTGAGTATTAAAGCCCGTAG 288
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 241 CTCCAGGATCTTAAGATTTCCTCCTAATTTCGTCCGTCAGCTGAGCATTAAAGCCCGTAG 300
Query 289 AAACTGTAGCAACATCGGTGTTGCGCAGATCGTGGCTGCTAAGTGGTCCAACAACCCTTC 348
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct 301 AAACTGTAGCAACATCGGTGTTGCACAGATCGTGGCGGCTAAGTGGTCCAACAACCCATC 360
Query 349 CTCCGGGTTACCTTCGGCGGCGGCGGCGGCTGCTGCCTCGTCTGCATCTGCGGTTTCTTC 408
||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 361 CTCCGCGTTACCTTCGGCGGCGGCGGCTGCTGCTACCTCGTCTGCATCTGCGGTTTCTTC 420
Query 409 CGCCGCATCTGCAGCCGCAGCCTCGTCCGCCGCCGCCGCCCCTGTGGCTGCCGCTCCTCC 468
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 421 CGCCGCATCTGCAGCCGCAGCCTCGTCCGCCGCCGCCGCCCCTGTGGCTGCCGCGCCT-C 479
Query 469 CGTCGTCGTGCTGAAAAGCGTCGATGAGGAGGTTGTGGTGGCCGAGGAGGGGATTAGGGA 528
| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 480 C--CGTCGTGCTGAAAAGCGTCGATGAGGAGGTTGTGGTGGCCGAGGAGGGGATCAGGGA 537
Query 529 GAAGATAGGTAGTGTACAGCTGACGGATTCCAAACATTCATTCTTGAGCTCCGATGGGAG 588
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 538 GAAGATAGGTAGTGTACAGCTGACGGATTCCAAACATTCTTTCTTGAGCTCCGATGGGAG 597
Query 589 CCTCACTGTTCATGCCGGTGAAAGATTAGGTCGTGGTATAGTGACGGATGCTATCACTAC 648
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 598 CCTCACTGTTCATGCCGGTGAAAGATTAGGCCGTGGTATAGTGACGGATGCTATCACTAC 657
Query 649 TCCTGTAGTCAACACATCTGCCTATTTCTTCAAGAAAACTGCTGAGCTTATTGACTTCAA 708
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 658 TCCTGTAGTCAACACATCTGCCTACTTCTTCAAGAAAACTGCTGAGCTTATTGACTTCAA 717
Query 709 GGAGAAAAGGAGTGTGAGTTTCGAGTATGGTCGTTATGGTAACCCTACGACTGTGGTACT 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 GGAGAAAAGGAGTGTGAGTTTCGAGTATGGTCGTTATGGTAACCCTACGACTGTGGTACT 777
Query 769 TGAAGAGAAGATAAGTGCACTTGAAGGAGCTGAATCAACTTTGGTTATGGCATCTGGGAT 828
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 778 TGAAGATAAGATAAGTGCACTTGAAGGGGCTGAATCAACTTTGGTTATGGCATCTGGGAT 837
Query 829 GTGTGCAAGCACTGTTATGCTTTTGGCACTGGTTCCTGCCGGTGGACACATTGTGACAAC 888
|||||||||||||||||||||||||||| |||||||||| |||||||||||||| || ||
Sbjct 838 GTGTGCAAGCACTGTTATGCTTTTGGCATTGGTTCCTGCTGGTGGACACATTGTCACTAC 897
Query 889 GACTGATTGCTACAGGAAGACAAGGATTTTCATGGAGAATTTTCTTCCCAAGTTGGGGAT 948
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 898 TACTGATTGCTACAGGAAGACTAGGATCTTCATGGAGAATTTTCTTCCCAAGTTGGGGAT 957
Query 949 CACTGCCACTGTGATTGATCCTGCTGATATCGCAGGGCTTGAAGCTGCAGTGAATGAGTT 1008
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 CACTGTCACTGTGATTGATCCTGCTGATATCGCAGGGCTTGAAGCTGCAGTGAATGAGTT 1017
Query 1009 CAAGGTTTCTCTGTTCTTCACTGAGTCCCCGACAAACCCATTCCTTAGATGTGTCGACAT 1068
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 CAAGGTATCTCTGTTCTTCACTGAGTCCCCGACAAACCCATTCCTTAGATGTGTCGACAT 1077
Query 1069 TGAGCTAGTTTCAGAAATATGCCACAAAAGGGGAACTCTTGTTTGCATTGATGGCACCTT 1128
||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1078 TGAGCTAGTTTCAAAAATATGCCACAAGAGGGGAACTCTGGTTTGCATTGATGGCACCTT 1137
Query 1129 TGCAACACCTCTGAATCAGAAAGCCCTTGCTCTTGGTGCTGATCTTGTTGTGCACTCTGC 1188
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1138 TGCAACACCTCTGAATCAGAAAGCCCTTGCTCTTGGTGCTGATCTTGTCGTGCACTCTGC 1197
Query 1189 TACAAAGTACATTGGAGGACACAATGATGTTCTTGCTGGATGCATCTGTGGTTCACTGAA 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 TACAAAGTACATTGGAGGACACAATGATGTTCTTGCTGGATGCATCTGTGGTTCACTGAA 1257
Query 1249 GTTGGTTTCAGAAATTCGCAATCTGCATCATGTGTTGGGAGGCACACTTAACCCAAACGC 1308
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1258 GTTGGTTTCAGAAATTCGCAATCTGCATCATGTGTTGGGAGGAACACTTAACCCAAACGC 1317
Query 1309 TGCATACCTAATCATCCGAGGCATGAAGACATTGCATCTTCGTGTACAGCAACAGAATTC 1368
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 TGCGTACCTAATCATCCGAGGCATGAAGACATTGCATCTTCGTGTACAGCAACAGAATTC 1377
Query 1369 GACCGCTTTTAGAATGGCCGAAATTTTAGAGGCACATCCTAAGGTGAGTCATGTGTACTA 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1378 GACCGCTTTTAGAATGGCCGAAATTTTAGAGGCACATCCTAAGGTGAGTCATGTGTACTA 1437
Query 1429 TCCAGGCCTTCCAAGTCATCCCGAACATGAACTCGCCAAGCGACAAATGACTGGTTTTGG 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 TCCAGGCCTTCCAAGTCATCCCGAACATGAACTCGCCAAGCGACAAATGACTGGTTTTGG 1497
Query 1489 AGGTGTGGTCAGTTTCGAGATTGATGGAGACATTGAAACGACAATCAAGTTTGTGGATTC 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498 AGGTGTGGTCAGTTTCGAGATTGATGGAGACATTGAAACGACAATCAAGTTTGTGGATTC 1557
Query 1549 TCTAAAGATTCCTTACATCGCACCATCTTTCGGTGGCTGTGAAAGCATTGTTGACCAACC 1608
|||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1558 TCTAAAGATTCCTTACATTGCACCATCCTTCGGTGGCTGCGAAAGCATTGTTGACCAACC 1617
Query 1609 TGCTATCATGTCCTACTGGGATCTGCCGCAAGAGGAGAGACTAAAGTATGGAATCAAAGA 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 TGCTATCATGTCCTACTGGGATCTGCCGCAAGAGGAGAGACTAAAGTATGGAATCAAAGA 1677
Query 1669 TAACTTGGTTCGTTTCAGTTTTGGAGTTGAAGACTTTGAAGATGTCAAAGCTGACATTCT 1728
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1678 TAACTTGGTTCGTTTCAGCTTTGGAGTTGAAGACTTTGAAGATGTCAAAGCTGACATTCT 1737
Query 1729 TCAAGCTCTCGAAGCCATCTGAAAATGATATACAACACCCAAAAACGCCGTCGTTTCTTT 1788
|||||||||||||||||||||||||||| | || ||| ||||||||| |||||||||||
Sbjct 1738 TCAAGCTCTCGAAGCCATCTGAAAATGACA--CATCACACAAAAACGCTGTCGTTTCTTT 1795
Query 1789 GTCTTTTATTTATCTCTCTTTGCTGTTTTCAGTCACCGTAATAATGATGTCTTTGAACTA 1848
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 GTCCTTTATTTATCTCTCTTTGCTGTTTTCAGTCACCGTAATAATGATGTCTTTGAACTA 1855
Query 1849 TTTGTTCCGCGACATTTACGTTCCGAAATAATCGTGTACTATTATTATTGTTTGTTGTGC 1908
|| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1856 TT-GTTCCGCGACATTTACGTTCCGAAATAATCGTGTACTATTATGAT-GTTTGTTGTGC 1913
Query 1909 TATAGTAA-AA-TTCTATTTAGTCCGTTTTATGCCTTAAAGTGGTTAAATTGGATAA-TA 1965
|||| ||| || |||| |||||| |||||| | ||||||| ||||||||| ||||| |
Sbjct 1914 TATA-TAATAAATTCTGTTTAGTTCGTTTTGCGTCTTAAAGAGGTTAAATTAGATAACT- 1971
Query 1966 GGCCCCATGAGAACGACCAGTGTGGCCATGGCTTTGTGGTAAGAACACCTTGTGTTTGGA 2025
|| |||||| ||||||||| ||||||||| |||||||||||||||| ||||||| |||||
Sbjct 1972 GGTCCCATGTGAACGACCATTGTGGCCATTGCTTTGTGGTAAGAACTCCTTGTGCTTGGA 2031
Query 2026 ACTTCAA 2032
|| ||||
Sbjct 2032 ACCTCAA 2038
> AT1G33320.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein | chr1:12081009-12083462 FORWARD
LENGTH=1239
Length=1239
Score = 817 bits (442), Expect = 0.0
Identities = 938/1172 (80%), Gaps = 55/1172 (5%)
Strand=Plus/Plus
Query 605 GGTGAAAGATTAGGTCGTGGTATAG-TGACGGA-TGCTATCACTACTCC-TGTAGTCAAC 661
|||||||||||| |||||| ||| | ||| || | | ||||| || || ||||||||||
Sbjct 97 GGTGAAAGATTACGTCGTGATAT-GAAGAC-GAGTTCGATCACGAC-CCTTGTAGTCAAC 153
Query 662 ACATCTG-CCTATTTCTTC-AAGAAAACTGCTGAGCTTATTGACTTCAAGGAGAAAA-GG 718
||| | | |||| |||||| ||| | ||| | ||||| || ||||||||||| |||| ||
Sbjct 154 ACAAC-GACCTACTTCTTCAAAG-ATACTACCGAGCTAATCGACTTCAAGGA-AAAACGG 210
Query 719 AGTGTGAGTT-T-CGAGTATGGTCGTTATGGTAACCCTACGACTGTGGTACTTGAAGAGA 776
| | ||| || | ||||||| ||||||||| ||||| || ||| ||| ||| ||||| |
Sbjct 211 A-T-TGACTTGTATGAGTATGCTCGTTATGGAAACCCAACAACTATGGCACTCGAAGAAA 268
Query 777 AGATAAGTGCACTTGAAGGAGCTGAATCAACTTTGGTTATGGCATCTGGGATGTGTGCAA 836
|||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||| |||||
Sbjct 269 AGATTAGTGTACTTGAAGGGGCTGAATCAACTTTGGTAATGGCATCGGGGATGTATGCAA 328
Query 837 GCACTGTTATGCTTTTGGCACTGGTTCCTGCCGGTGGACACATTGTGACAACGACTGATT 896
| | ||||||||||||||| |||||||| | |||||| |||||| |||| | ||||
Sbjct 329 GTAATGTTATGCTTTTGGCTTTGGTTCCTACAAATGGACATATTGTGGCAACTAAAGATT 388
Query 897 GCTAC-AGGAAGACAAGGATTTTCATGGAGAATTTTCTTCCCAAGTTGGGGATCACTGCC 955
| ||| ||| ||||||||||||||||||||||||||||| | || |||| |||||||
Sbjct 389 GTTACAAGG-AGACAAGGATTTTCATGGAGAATTTTCTTACTAAACTGGGAATCACTGTA 447
Query 956 ACTGTGATTGA-TCCTGCTGATATCGCAGGGCTTGAAGCTGCA-GTGAATGAGT-TCAAG 1012
||| | ||||| || || |||||| || ||||| || || | || ||| | | | |
Sbjct 448 ACTTTTATTGACTC-TGATGATATTGCGGGGCTCCAAACT-CTTGTTAATAACCATGA-G 504
Query 1013 GTTTCTCTGTTCTTCACTGAGTCCCCGACAAACCCATTCCTTAGATGTGTCGACATTGAG 1072
|||||| ||||||| || |||||||| ||||| ||||| ||| ||||||| || ||| ||
Sbjct 505 GTTTCTTTGTTCTTTACCGAGTCCCCAACAAATCCATTTCTTCGATGTGTAGATATTAAG 564
Query 1073 CTAGTTTCAGAAATATGCCACAAAAGGGGAACTCTTGTTTGCATTGATGGC-ACCTTTGC 1131
|||||||| |||| || || | ||| |||||||||||||| || || | | ||| ||||
Sbjct 565 TTAGTTTCAAAAATCTGTCATAGAAGAGGAACTCTTGTTTGTATAGACG-CTACCATTGC 623
Query 1132 AACACCTCTGAATCAGAAAGCC-CTTGCTCTTGGTGCTGATCTTGTTGTGCACTCTGCTA 1190
||||||| | ||||| |||| | |||||||||||||||||||||||| || |||||||
Sbjct 624 AACACCTATCAATCA-AAAGACACTTGCTCTTGGTGCTGATCTTGTTCACCATTCTGCTA 682
Query 1191 CAAAGTACATTGGAGGACACAATGATGTTCTTGCTGGATGCATCTGTGGTTCACTGAAGT 1250
| |||||||||||||| ||||| ||| |||| |||||| |||| | |||||| || |||
Sbjct 683 CTAAGTACATTGGAGGCCACAACGATTTTCTAGCTGGAAGCATATCCGGTTCAATGGAGT 742
Query 1251 TGGTTTCAGAA-ATTCGCAATCTGCATCATG-TGTTGGGAGGCACACTTAACCCAAACGC 1308
||||||| || ||||||||| ||||| | | | ||||||||||| ||||| || |||||
Sbjct 743 TGGTTTCC-AAGATTCGCAATTTGCATAA-GCTTTTGGGAGGCACGCTTAATCCGAACGC 800
Query 1309 TGCATACCTAATCATCCGAGGCATGAAGAC-ATTGCATCTTCGTGTACAG-CAACAGAAT 1366
|||||| || |||| |||||||||||||| || ||||||||||||| || |||||||||
Sbjct 801 TGCATATTTACTCATACGAGGCATGAAGACGAT-GCATCTTCGTGTA-AGACAACAGAAT 858
Query 1367 TCGACCGCTTTTA-GAATGGCCGAAATTTTAGAGGCACATCCTAAGGTGAGTCATGTGTA 1425
|| |||| | | | || ||||| || | ||||| |||||||| |||||||||| || ||
Sbjct 859 TCAACCGGTATGAAGA-TGGCCCAAGTGTTAGAAGCACATCCCAAGGTGAGTCGCGTTTA 917
Query 1426 CTATCCAGGCCTTCCAAGTCATCCCGAACATG-AACTCGCCAAGCGACAAATGACTGGTT 1484
||||| ||||||||| ||||||||||||||| || | |||||||||||||||||||||
Sbjct 918 CTATCTAGGCCTTCCGAGTCATCCCGAACATTTAA-TAGCCAAGCGACAAATGACTGGTA 976
Query 1485 TTGGAGGTGTGGTCAGTTTCGAGATTGATGGAGA-CATTGAA-ACGACAATCAAGTTTGT 1542
|||| || || || |||||||||||||||||| | | || || ||||||||||| |
Sbjct 977 TTGGTGGCCTGATCTCTTTCGAGATTGATGGAGATC-TC-AAGACTACAATCAAGTTCAT 1034
Query 1543 GGATTCTCTAAAGATTCCTTACATCGCACCATC-TTTCGGTGGCTGTGAAAGCATTGTTG 1601
||| |||| ||||| |||||| | ||| |||| ||| ||||| || || ||| | || |
Sbjct 1035 CGATGCTCTGAAGATCCCTTACCTTGCAGCATCGTTT-GGTGGATGCGAGAGCCTCGTGG 1093
Query 1602 ACCAAC-CTGCTATCATGTCCTACTGGGATCTGCCGCAAGAGGAGAGACT-AAAGTATGG 1659
|||||| | || | || | | ||||||| | || | ||| || || || |||| ||||
Sbjct 1094 ACCAACTC-GCCA-CAGGGA-T-CTGGGATATACCACGAGAAGAAAGGCTTAAAG-ATGG 1148
Query 1660 AATCAAAGATAACTTGGTTCGTTTCAGTTTTGG-AGTTGAAGACTTTGAAGATGTCAAAG 1718
| || |||| ||| | ||||| ||||||||||| | ||||||||||||| || |||| |
Sbjct 1149 ATTCCAAGACAACCTAGTTCGCTTCAGTTTTGGTA-TTGAAGACTTTGAGGACATCAAGG 1207
Query 1719 CTGACATTCTTCAAGCTCTCGAAGCCATCTGA 1750
||||| |||| |||||||| ||| ||||||||
Sbjct 1208 CTGACGTTCTCCAAGCTCTTGAAACCATCTGA 1239
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101304699810
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5