BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477426 Length=1588 Score E Sequences producing significant alignments: (Bits) Value AT3G01060.1 | Symbols: | unknown protein; Has 640 Blast hits t... 2327 0.0 > AT3G01060.1 | Symbols: | unknown protein; Has 640 Blast hits to 638 proteins in 201 species: Archae - 0; Bacteria - 293; Metazoa - 0; Fungi - 71; Plants - 72; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink). | chr3:16643-18840 REVERSE LENGTH=1614 Length=1614 Score = 2327 bits (1260), Expect = 0.0 Identities = 1400/1467 (95%), Gaps = 11/1467 (1%) Strand=Plus/Plus Query 1 AAAAACCTTACCTGaa--aaaaaaaaaaaaaTCGAATTC-AACTGAGAAGCGAAGAAGAA 57 |||||||||||||||| ||||||||||||| || | |||||||||||||||||||| Sbjct 1 AAAAACCTTACCTGAACTAAAAAAAAAAAAA---AAAACGAACTGAGAAGCGAAGAAGAA 57 Query 58 AATGGCGGCAGCGGCCATGGCCGTTCATCTCCCGAAACATTCTTCGTTTCTTCCGAAACC 117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 AATGGCGGCAGCGGCCATGGCCGTTCATCTCCCGAAACATTCTTCGTTTCTTCCGAAACC 117 Query 118 CAAACTTCCATTGGAT-AAAAACCACAACTTTCTCGGTGGCTCATTGAATTTAGGTCGAC 176 |||||||||||||||| ||||| | ||||||||||||||| ||||| ||||||||||||| Sbjct 118 CAAACTTCCATTGGATAAAAAAAC-CAACTTTCTCGGTGGGTCATTTAATTTAGGTCGAC 176 Query 177 CCATGTCCGTATACCGGGAAATTAACAGTCCGGTGTTGGTCTCCGCTTCTTCGACCAGCA 236 ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||| Sbjct 177 CCATGTCCGTAAACCGGGAATTTAACAGTCCGGTGATGGTCTCCGCTTCTTCGACGAGCA 236 Query 237 AGACCGTCGTTACTGATGACGTAGACGGAGATCGAAGTAAACGGTTTTATATAAACTTCA 296 |||||||| |||| |||||||||||||| |||| ||||||||| |||||||| ||||||| Sbjct 237 AGACCGTCCTTACCGATGACGTAGACGGCGATCAAAGTAAACGCTTTTATATTAACTTCA 296 Query 297 CTGGCTTTCCTTTTCCTCTTGGTCCTTTCCTTAACCGGCGCACCATCAGAACCGAGGCGG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 297 CTGGCTTTCCTTTTCCTCTTGGTCCTTTCCTTAACCGGCGCACCATCAGAACCGAGGCGG 356 Query 357 TTAAAGGTTGCATATGGATGTTTGAACAAGAACAAGCTTTAGGGTTTAGCAGTGTCTCCA 416 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 357 TTAAAGGTTGCATATGGATGTTTGAACAAGAACAAGCTTTAGGGTTTAGCAGCGTGTCCA 416 Query 417 CGAATATACGAATGACTATCATCAAACTAAAATCTGGAGGTTTATGGGTCCATGCTCCTA 476 | ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 417 CTAATATACGAATGACTGTCATCAAACTAAAATCTGGAGGTTTATGGGTTCATGCTCCTA 476 Query 477 TTGCTCCCACCAAAGAGTGTATTCAGCTTATTAAGGAGTTGGAAGCTCCAGTTGAGTACA 536 |||||||||||||||||||| | ||||||||||||||||||| |||||| |||||||||| Sbjct 477 TTGCTCCCACCAAAGAGTGTGTCCAGCTTATTAAGGAGTTGGGAGCTCCGGTTGAGTACA 536 Query 537 TTGTCCTTCCAACATTTGCTTATGAGCACAAGATTTTTGTCGGTCCTTTTTCAAGAAAGT 596 ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 537 TTGTCCTGCCAACGTTTGCTTATGAGCACAAGATTTTTGTCGGTCCTTTTTCTAGAAAGT 596 Query 597 TCCCTAAGGCTCAAGTATGGGTTGCACCAAGACAATGGAGCTGGCCATTGAACTTACCAC 656 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 597 TCCCCAAGGCTCAAGTATGGGTTGCACCAAGACAATGGAGCTGGCCATTGAACTTACCAC 656 Query 657 TCGAGTTTTTTGGTATCTTTCGTGCTAAAATCATTAAAGACGGGGACTTATCTACGCCAT 716 | |||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 657 TTGAGTTTTTCGGTATCTTTCGTGCTAAAATCATCAAAGACAGGGACTTATCTACGCCAT 716 Query 717 GGGCTGAGGAGATCGAACAGAAAGTCCTAAGCTCCCCAGAAGTTGGAATTGGACCGTATG 776 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 717 GGGCTGAGGAGATCGAACAGAAAGTCCTAAGCTCCCCAGAAGTTGGAATTGGACCATATG 776 Query 777 TCGAAGTAGCGTTCTACCATAAGCGGTCAAGAACCCTTTTAGTCACCGATGCTGTGATAT 836 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 777 TCGAAGTAGCGTTCTACCATAAGCGGTCAAGAACCCTTTTAGTCACTGATGCTGTGATCT 836 Query 837 TCGTCCCGCGGAAACCGCCCTCGAGTATCAGCAATGAATCCTTGTTGGCCTCGGCTAAGA 896 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 837 TCGTCCCGCGGAAACCTCCCTCGAGTATCAGCAACGAATCCTTGTTGGCCTCGGCTAAGA 896 Query 897 ATGGACTAGCTGTGAAGATACTTAGCAAAGGAAAAGACGTACCCAATGATCCAGTGGTTG 956 |||||||||||||||||||||||||||||||||||||| | || |||||||| ||||||| Sbjct 897 ATGGACTAGCTGTGAAGATACTTAGCAAAGGAAAAGACATTCCTAATGATCCTGTGGTTG 956 Query 957 ATAATCCGAACACCCGCCAAAAAGGGTGGGAAAGAATGGTTCTACAAATCCTATTTCTTG 1016 ||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 957 ATAATCCTAACACCCGCCAAAAAGGATGGGAAAGAATGGTTCTGCAAATCCTATTTCTTG 1016 Query 1017 GTCCCTCGAATCTCTTGGAACCAAACGCAAGCTTCGCACGAATGTCGCAGAAGCTGATCG 1076 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1017 GTCCCTCGAATCTCTTGGAACCAAACGCAAGCTTCGCACGAATGTCACAGAAGCTGATCG 1076 Query 1077 TTTCTCCCATTGTAAAGACTTTGGTCTTTAGCAAAGTCCCTGAGAAGGTGAGGGATTGGA 1136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1077 TTTCTCCCATTGTAAAGACTTTGGTCTTTAGCAAAGTCCCTGAGAAGGTGAGGGATTGGA 1136 Query 1137 TCGATGAGATAGCCCGGGACTGGAGATTTAAAAGGATAATCCCAGCTCATTTCGAAGCTC 1196 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 1137 TCGATGAGATAGCCCGTGACTGGAGATTTAAAAGGATTATCCCAGCTCATTTCGAAGCTC 1196 Query 1197 CAATAAAAGCAGGAAGATCAGAGTTTCTAGCTGCGTTTGGATTCCTAGAGGATCTTCTAG 1256 ||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1197 CAATAAACGCAGGAAGATCAGATTTTCTAGCTGCGTTTGGGTTCCTAGAGGATCTTCTAG 1256 Query 1257 GGGAAAGATATGTAACTCGTCCTTCGCTCTCTCTTCTTTTCACTTCGCTAATGGGAAAAG 1316 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 1257 GGGAAAGATATGTAACTCGTCCTTCGCTCTCTCTTCTCTTCACTTCACTAATGGGAAAAG 1316 Query 1317 CTGCGAGCTATTTTCCTCCAGACGATATGAGAACTCTCTCTTCTCTTGATCAGTTCTTAG 1376 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1317 CTGCGAGCTATTTTCCTCCAGACGATATGAGAACTCTCTCTTCACTTGATCAGTTCTTAG 1376 Query 1377 TCTCTGTTGGGGCTGTGAAAAAGACAGTATCCGGTAGAAAACGAAGATGATGGCAAAACA 1436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1377 TCTCTGTTGGGGCTGTGAAAAAGACAGTATCCGGTAGAAAACGAAGATGATGGCAAAACA 1436 Query 1437 Gaaaaaaa-aaGATTCAGCCTTGTAAT 1462 |||||| ||||| |||| || |||| Sbjct 1437 GAAAAATGGAAGATACAGC-TT-TAAT 1461 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78413251290 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5