BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477517 Length=2696 Score E Sequences producing significant alignments: (Bits) Value AT3G02750.3 | Symbols: | Protein phosphatase 2C family protein... 1748 0.0 > AT3G02750.3 | Symbols: | Protein phosphatase 2C family protein | chr3:593207-595755 REVERSE LENGTH=2276 Length=2276 Score = 1748 bits (946), Expect = 0.0 Identities = 1043/1087 (96%), Gaps = 17/1087 (2%) Strand=Plus/Plus Query 1620 CAGCTGAGGCAGAGAGAATAAGAAAGTGTCGAGGACGGGTGTTTGCACTTAGAGATGAAC 1679 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 1194 CAGCTGAGGCAGAGAGAATAAGAAAGTGTCGAGGACGAGTGTTTGCTCTTAGAGATGAAC 1253 Query 1680 CTGAAGTTTGTAGAGTTTGGCTGCCAAATTGTGACTCACCTGGACTTGCTATGGCACGTG 1739 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1254 CTGAAGTTTGTAGAGTTTGGCTGCCAAATTGTGACTCACCTGGACTTGCTATGGCACGTG 1313 Query 1740 CTTTTGGAGACTTTTGCCTTAAAGATTTTGGCCTAATCTCTGTGCCTGATGTATCTTTCC 1799 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1314 CTTTTGGTGACTTTTGCCTTAAAGATTTTGGCCTAATCTCTGTGCCTGATGTATCTTTCC 1373 Query 1800 GTC-GATTAACCGAAAAAGATGAGTTTATAGTGTTGGCTACAGATGGGATTTGGGATGTT 1858 ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1374 GTCAG-TTAACCGAAAAAGATGAGTTTATAGTGTTGGCTACAGATGGGATTTGGGATGTT 1432 Query 1859 CTCTCAAATGAAGATGTAGTGGCGATTGTAGCTTCAGCTCCATCGCGCTCCTCTGCAGCT 1918 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1433 CTCTCAAATGAAGATGTAGTGGCGATTGTAGCTTCAGCTCCATCGCGCTCCTCTGCAGCA 1492 Query 1919 AGAGCTTTAGTCGAGTCTGCAGTTAGAGCTTGGAGATACAAATACCCGACTTCCAAAGTC 1978 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 1493 AGAGCTTTAGTCGAGTCTGCGGTCAGAGCTTGGAGATACAAATACCCGACTTCCAAAGTC 1552 Query 1979 GATGACTGTGCCGCTGTTTGCTTGTATCTAGACTCCAACAACACAAACGCCATATCTACA 2038 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1553 GATGACTGTGCCGCTGTTTGCTTGTATCTAGACTCCAGCAACACAAACGCCATATCTACA 1612 Query 2039 GCTTCTTCCATCTCCAAACTGGAAGATG-A-A-GAAGAAGAACTAAAAGC-AGCAACTGA 2094 |||||||||||||||||||| ||||||| | | ||||||||||||||||| | | ||||| Sbjct 1613 GCTTCTTCCATCTCCAAACTTGAAGATGGAGAAGAAGAAGAACTAAAAGCCA-CGACTGA 1671 Query 2095 GGATGATGATGCATCAGGACCAAGCGGTCTAGGCCGTTCGAGTACTGTCAGGACGGGGAA 2154 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1672 GGATGATGATGCATCAGGACCAAGCGGTCTAGGCCGTTCGAGTACTGTCAGGTCGGGGAA 1731 Query 2155 AGAGATTGCTCTTGATGAAAGTGAAGCTGAGAAGCTGATAAAAGAAGCGGATAACTTGGA 2214 |||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1732 AGAGATTGCTCTCGACGAAAGTGAAACTGAGAAGCTGATAAAAGAAGCGGATAACTTGGA 1791 Query 2215 TTCTGAACCTGGAACAGAGTATTCTGCACTAGAAGGTGTTGCAAGAGTTAATACACTTTT 2274 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1792 TTCAGAACCTGGAACAGAGTATTCTGCACTTGAAGGTGTTGCAAGAGTTAATACACTTTT 1851 Query 2275 AAACTTACCAAGATTTGTGCCTGGAAAGTGAAAAGAGAAAGAAGAGTTGAAGTGGAAGAA 2334 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 1852 AAACTTACCAAGATTTGTGCCTGGAAAGTGAATAGAGAAAGAAGAGTTGAAGTG-AAGAA 1910 Query 2335 GTTGAGAGGTGATAAATGATATCAAAATAAATCACCCAAGACAAGGTACTGTGtcttttt 2394 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1911 GTTGAGAGGTGATTAATGATATCAAA-TAAATCACCCAAGACAAGGTACTGTGTCTTTTT 1969 Query 2395 gttcatttgtttttccgtttcaactttcttacattgatctctattctttttttGAGTCAT 2454 |||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||| Sbjct 1970 GTTCTTTTGTTTTTCCTTTTCAACTTTCTT-CATTGATCTCTATTCTTTTTT-GAGTCAT 2027 Query 2455 AATTCATTGGTTTTGGAACCTAAAtttttgtcagttttgtcttt--tat-tgtctttctc 2511 |||||||||||||||||||||||||||||||||||||||||||| | | |||||||||| Sbjct 2028 AATTCATTGGTTTTGGAACCTAAATTTTTGTCAGTTTTGTCTTTGGTTTATGTCTTTCTC 2087 Query 2512 tcttgttgatgtttatgctgttttttggtcttgtCAGTAAAGAAGAGTGAAAAA-CATCA 2570 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct 2088 TCTTGTTAATGTTTATGTTGTTTTTTGGTCTTGTCAGTAAAGAAGAGTGAAAAAACATCA 2147 Query 2571 CATGATGTAATAATGGCTTGTGTCTGTAATTCTGTGATTCCCCTCAGGCTTAATTTTGTC 2630 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2148 CATCATGTAATAATGGCTTGTGTCTGTAATTCTGTGAATCCCCTCAGGCTTAATTTTGTC 2207 Query 2631 AGTCTGTTGGGAAAATTTCCTGTTTTTATCTTTTCAAAAAGCTCCAATTCCAAGT-ACAG 2689 |||||||||||| |||||||||||| | |||||||||||||||||||||||| || |||| Sbjct 2208 AGTCTGTTGGGACAATTTCCTGTTTCTGTCTTTTCAAAAAGCTCCAATTCCA-GTTACAG 2266 Query 2690 AATTTGT 2696 ||||||| Sbjct 2267 AATTTGT 2273 Score = 1522 bits (824), Expect = 0.0 Identities = 906/945 (96%), Gaps = 7/945 (1%) Strand=Plus/Plus Query 683 AGACATCTCTTTTGCATAGTTTGAATCATCATTGCTCTTTGCGGTGAGAATTGTGATCTA 742 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 149 AGAGATCTCTTTTGCATAGTTTGAATCATCATTGCTCTTTCCGGTGAGAATTGTGATCTA 208 Query 743 AAGGTTCAATCTTTCTCGCTGGAGGACCGTGGGGGTGATTGTTCCATTGTTGGTCTGGAG 802 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 209 AAGGTTCAATCTTTCTCGCTGGAGGACCGTCGGGGTGATTGTACCATTGTTGGTCTGGAG 268 Query 803 TGCCTTCTTAATATAATCAGGGCCCTTAGGATGGGGTCCTGTTTATCTGCAGAGAGCAGG 862 ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 269 TGCCTGCTCAATATAATCAGGGCCCTTAAAATGGGGTCCTGTTTATCTGCAGAGAGCAGG 328 Query 863 AGCCCTAGACCGGGCTCTCCTTGCTCTCCTGCTTTCAGTGTGAGGAAGAGGAAGAACTCT 922 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 329 AGCCCTAGACCGGGCTCTCCTTGCTCTCCTGCTTTTAGTGTGAGGAAGAGGAAGAACTCT 388 Query 923 AAGAAGCGACCTGGTTCTAGGAACTCTTCCTTTGATTACAGAAGAGAAGAACCGTTGAAT 982 ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 389 AAGAAGCGACCTGGTTCTAGGAACTCTTCCTTTGATTACCGGAGAGAAGAACCGTTGAAT 448 Query 983 CAGGTTCCGGGGCGCATGTTCTTGAATGGATCAAGTGAGGTTGCTTGTATCTTCACTCAA 1042 ||||||||||| || ||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 449 CAGGTTCCGGGCCGGATGTTCTTGAATGGATCAACTGAGGTTGCTTGTATCTACACTCAA 508 Query 1043 CAAGGCAAGAAAGGGCCTAATCAAGATGCCATGGTTGTTTGGGAGGATTTTGGTTCGAGG 1102 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 509 CAAGGCAAGAAAGGGCCTAATCAAGATGCCATGGTTGTTTGGGAGAATTTTGGTTCGAGG 568 Query 1103 ACAGATACAATCTTCTGTGGAGTGTTTGATGGACATGGTCCATATGGTCATATGGTTGCA 1162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 569 ACAGATACAATCTTCTGTGGAGTGTTTGATGGACATGGTCCATATGGTCATATGGTTGCA 628 Query 1163 AAGAGGGTTAGAGACAATCTTCCTCTCAAATTAAGTGCTTATTGGGAAGCAAAAGTACCA 1222 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 629 AAGAGAGTCAGAGACAATCTTCCTCTCAAATTAAGTGCTTATTGGGAAGCAAAAGTACCA 688 Query 1223 GTTGAAGGTGTCCTAAAGGCAATCACCACAGAAACCGTTAATAAT-TCAACGAACATTAA 1281 ||||||||||| || |||||||||||||| || || || |||||| | ||| |||||||| Sbjct 689 GTTGAAGGTGTTCTTAAGGCAATCACCACCGACACTGTCAATAATGT-AACCAACATTAA 747 Query 1282 CAACCCTGAAGA---TGCTGCTGCTGCTGCTTTTGT-ATCTGCTGAAGAAGAAACTAGGA 1337 |||||||||||| ||||||||||||||||||||| | |||||||||||||| |||||| Sbjct 748 CAACCCTGAAGATGCTGCTGCTGCTGCTGCTTTTGTCA-CTGCTGAAGAAGAACCTAGGA 806 Query 1338 CATCTGCTGACATGGAGGAGGAGAACACGGAATCCCAACCGGAATTGTTTCAAACGCTGA 1397 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 807 CATCTGCTGACATGGAGGAGGAGAACACAGAAACCCAACCGGAATTGTTTCAAACGCTGA 866 Query 1398 AAGAGTCGTTTCTTAAGGCTTTTAAAGTTATGGATAGAGAACTTAAATTCCATGGAAGTG 1457 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 867 AAGAGTCGTTTCTTAAGGCTTTTAAAGTTATGGATAGAGAGCTTAAATTCCATGGAAGTG 926 Query 1458 TTGACTGTTTCTGCAGTGGGACAACAGCTGTAACCTTGATCAAGCAGGGTCAGTATCTCG 1517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 927 TTGACTGTTTCTGCAGTGGGACAACAGCTGTAACCTTGATCAAGCAGGGTCAGTATCTCG 986 Query 1518 TTGTTGGAAATGTTGGGGACTCTAGAGCTGTAATGGGTACAAGAGACAGTGAAAATGCTC 1577 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||| Sbjct 987 TTGTTGGAAATGTTGGGGATTCCAGAGCTGTAATGGGTACAAGAGACAGTGAAAATACTC 1046 Query 1578 TTGTCGCTGTTCAACTAACTGTGGATCTTAAGCCAAATCTCCCAG 1622 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1047 TTGTCGCTGTTCAACTAACTGTGGATCTTAAGCCAAATCTCCCAG 1091 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 133895570867 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5