BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477595 Length=926 Score E Sequences producing significant alignments: (Bits) Value AT3G03490.1 | Symbols: PEX19-1, AtPEX19-1 | peroxin 19-1 | chr3... 1338 0.0 AT5G17550.1 | Symbols: PEX19-2, AtPEX19-2 | peroxin 19-2 | chr5... 660 0.0 > AT3G03490.1 | Symbols: PEX19-1, AtPEX19-1 | peroxin 19-1 | chr3:830165-831888 REVERSE LENGTH=1013 Length=1013 Score = 1338 bits (724), Expect = 0.0 Identities = 873/941 (93%), Gaps = 26/941 (3%) Strand=Plus/Plus Query 11 TCTTCT-TCTCTCTCTGATATTCTTCCTAC-TCCCATATTCGAATTGTTTAGACAGGGAG 68 ||| || ||||||||||||||||||| | | |||||| | ||||||||||| |||| || Sbjct 42 TCTCCTCTCTCTCTCTGATATTCTTCGT-CGTCCCATCTGCGAATTGTTTACACAGAGAT 100 Query 69 ATAGAGAGGAAGAGAAACGCCTAAGGAAAATGGCCAACAGTCACACCGATGACTTAGACG 128 |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| Sbjct 101 ATAGAGAGGAAGAGAACCGCCTAAGGAAAATGGCGAACAGTCACACCGATGACTTGGACG 160 Query 129 AGCTTCTCGATAGTGCATTGGATGATTTCAAAGATCTCAATC-TT-TC-TCaaagaaatc 185 |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| Sbjct 161 AGCTTCTCGATAGTGCATTGGATGATTTCAAAGATCTCAATCTTTCTCATCAAAGAAATC 220 Query 186 aaagggaagcgcaagaggagga-g--aagaagaagaaagaagagaCGGTTTTATTACCGA 242 |||||||||| ||||||||||| | ||||||| |||||||||||||||||||||||||| Sbjct 221 AAAGGGAAGCTCAAGAGGAGGAGGAAAAGAAGAGGAAAGAAGAGACGGTTTTATTACCGA 280 Query 243 GTGGAGTTCAAGGTCTTGGAATGGGATTACCAGATATGAGAAGCAAGAAAAAAGGAAAGC 302 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | Sbjct 281 GTGGAGTTCAAGGTCTTGGAATGGGATTACCAGATATGAGAAGCAAGAAGAGAGGAAAAC 340 Query 303 AAAAGGTTTCTAAAGAGGATCATGTTGCTGAAGCTCTTGATAAGCTTAGGGAACAAACTA 362 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 341 AAAAGGTTTCCAAAGAGGATCATGTTGCTGAAGCTCTTGATAAGCTTAGGGAACAAACTA 400 Query 363 GGGAAACTGTCAAAGGATTGGAATCCATTTCTTCTAAGCAGCTGCCAGCTTCTGATGATG 422 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 401 GGGAAACTGTCAAAGGATTGGAATCCATTTCTTCTAAGCAGCTGCCTGCTTCTGATGATG 460 Query 423 ATGGAATGGTTGAGGATTTTCTCAAGCAATTTGAGGATCTTACTGGATCCAAGGACTTGG 482 ||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||| Sbjct 461 ATGGAATGGTTGAGGATTTTCTCAAACAATTCGAGGATCTTGCTGGATCTAAGGACTTGG 520 Query 483 AATCAATAGTCGAAACGATGATGCAACAGCTATTGTCGAAGGATATTCTTCACGAACCAA 542 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 521 AATCAATAGTCGAGACGATGATGCAACAGCTATTGTCGAAGGATATTCTCCACGAACCAA 580 Query 543 TGAAGGAGCTTGGTGCAAGATATCCGAAATGGCTAAAAGAGAATGAAGCCAGTCTAACCA 602 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 581 TGAAGGAGCTTGGCGCAAGATATCCGAAATGGCTAAAAGAGAATGAAGCCAGTCTAAGCA 640 Query 603 AAGAAGACTACAAACGTTATTCACAACAGTACAAACTAATAGAAGAACTCAATGCGGTAT 662 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | Sbjct 641 AAGAAGACTACAAACGATATTCACAACAGTACAAACTAATAGAAGAACTCAATGCAGTGT 700 Query 663 ACGAGAATGAACCGAACAATTCTTCTAAGATAATGGAGATCATGCAGAAGATGCAAGAAT 722 ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| |||| Sbjct 701 ACGAGAATGAACCTAACAATTCATCTAAGATAATGGAGATCATGCAAAAGATGCAGGAAT 760 Query 723 GCGGACAACCCCCGAGTGATATAGTTAAAGAGATCGATCCCGGGTTTGATTTTGCAAGTC 782 | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 761 GTGGACAACCCCCGAGTGATATAGTTAAAGAGATTGATCCCGGGTTTGATTTCGCAAGTC 820 Query 783 TAGGCCAAATATCTCCGGAGATGCTAGAGTCCTCGCCAAATTGCTGTATAATGTGATGGG 842 | ||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||| Sbjct 821 TTGGCCAAATATCCCCAGAGATGCTGGAGTCCTCGCCAAATTGCTGTATCATGTGATGGG 880 Query 843 GCCAAACAGCTTCAAAAATTA-AT-TA-T--GT----C----GT-TT-TAAAACTCAAAA 887 ||||||||||||||| ||||| || | | || | || || |||||||||||| Sbjct 881 GCCAAACAGCTTCAAGAATTATATGTCGTTTGTTTTTCTCTTGTGTTATAAAACTCAAAA 940 Query 888 GCTCTGTTTCAATTATGATTGGAATTTCACACa-a-aaaaa 926 ||||||||||||||||||||||||||||||||| | ||||| Sbjct 941 GCTCTGTTTCAATTATGATTGGAATTTCACACACACAAAAA 981 > AT5G17550.1 | Symbols: PEX19-2, AtPEX19-2 | peroxin 19-2 | chr5:5786510-5788239 REVERSE LENGTH=1044 Length=1044 Score = 660 bits (357), Expect = 0.0 Identities = 643/779 (83%), Gaps = 27/779 (3%) Strand=Plus/Plus Query 74 GAGGAAGAGAAACGCCTAAGGAAAATGGCCAAC---AGTCACACCGATGACTTAGACGAG 130 |||||||||| || | | ||| ||||||||| | |||||||||||||||||||||| Sbjct 53 GAGGAAGAGAGAC-TC-GA-GAATATGGCCAACGATACTCACACCGATGACTTAGACGAG 109 Query 131 CTTCTCGATAGTGCATTGGATGATTTCAAAGATCTCAATCTTTCTCaaagaaatcaaagg 190 |||||||||||||| |||||||||||||| ||||| |||||| ||||||||||| ||| Sbjct 110 CTTCTCGATAGTGCCTTGGATGATTTCAAGGATCTTAATCTTACTCAAAGAAAT-GGAGG 168 Query 191 gaagcgcaagaggaggagaagaagaagaaagaagagaCGGTTTTATTACCGAGTGGAGTT 250 | | |||| || ||| | | | ||| ||||||| | | ||| || ||||| ||| Sbjct 169 G--G-TTAAGA-AAGAAGAGGGTG-ATAAAAAAGAGACAGAGTCATTGCCAAGTGGGGTT 223 Query 251 CAAGGTCTTGGAATGGGATTACCAGATATGAGAAGCAAGAAAAAAGGAAAGCAAAAGGTT 310 ||||||||||||||||| |||||||||||||| || ||||| ||||||||| ||||| || Sbjct 224 CAAGGTCTTGGAATGGGGTTACCAGATATGAGGAGTAAGAAGAAAGGAAAGAAAAAGATT 283 Query 311 TCTAAAGAGGATCATGTTGCTGAAGCTCTTGATAAGCTTAGGGAACAAACTAGGGAAACT 370 |||||||||| |||||| |||| || |||||||| || |||||||||||||| |||||| Sbjct 284 GCTAAAGAGGACCATGTTACTGAGGCACTTGATAAACTCAGGGAACAAACTAGAGAAACT 343 Query 371 GTCAAAGGA-TTGGAATCCATT-TCTTCTAAGCAGCTGCC-A--GCTTCTGATGATGATG 425 || || ||| ||| | ||| || || || ||||||| || | | ||||||||||| | Sbjct 344 GTGAAGGGACTTG-AGTCC-TTGTCATCGAAGCAGCAACCTACAGGTTCTGATGATGCT- 400 Query 426 GAATGGTTGAGGATTTTCTCAAGCAATTTGAGGATCTTACTGGATCCAAGGACTTGGAAT 485 | ||||||| |||| |||||||||| ||| |||||||||| || || |||||||| | Sbjct 401 -A-TGGTTGAAGATTGGATCAAGCAATTCGAGAATCTTACTGGGTCTAACGACTTGGAGT 458 Query 486 CAATAGTCGAAACGATGATGCAACAGCTATTGTCGAAGGATATTCTTCACGAACCAATGA 545 | ||||| || ||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 459 CGATAGTGGACACGATGATGCAACAGCTGTTATCGAAGGATATTCTTCACGAACCAATGA 518 Query 546 AGGAGCTTGGTGCAAGATATCCGAAATGGCTAAAAGAGAATGAAGCCAGTCTAACCAAAG 605 | ||| ||||||||||||| || ||||||||| ||||| ||||| ||||||||| ||| | Sbjct 519 AAGAGATTGGTGCAAGATACCCAAAATGGCTAGAAGAGCATGAATCCAGTCTAAACAAGG 578 Query 606 AAGACTACAAACGTTATTCACAACAGTACAAACTAAT-AGAAGAACTCAA-TGCGGTATA 663 |||| | | | |||||||||| ||||| |||| || | |||||||||| | ||| || Sbjct 579 AAGAATTCGATCGTTATTCACGCCAGTATGAACTTATCA-AAGAACTCAACTT-GGTGTA 636 Query 664 CGAGAATGAACCGAACAATTCTTCTAAGATAATGGAGATCATGCAGAAGATGCAAGAATG 723 |||||| ||||| |||||||| | |||||||||||||| ||||||||||||||||| || Sbjct 637 CGAGAACGAACCAAACAATTCGACCAAGATAATGGAGATAATGCAGAAGATGCAAGAGTG 696 Query 724 CGGACAACCCCCGAGTGATATAGTTAAAGAGATCGATCCCGGGTTTGATTTTGCAAGTCT 783 |||||||| |||||||||||||| ||||||| ||||| || |||||||| || ||||| Sbjct 697 TGGACAACCACCGAGTGATATAGTGCAAGAGATGGATCCTGGCTTTGATTTCGCTAGTCT 756 Query 784 AGGCCAAATATCTCCGGAGATGCTAGAGTCCTCGCCAAATTGCTGTATAATGTGATGGG 842 |||||||| |||||||| ||||| ||||| || |||||||| ||| |||||||| ||| Sbjct 757 GGGCCAAATGTCTCCGGACATGCTCGAGTCTTCACCAAATTGTTGTGTAATGTGA-GGG 814 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45260966447 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5