BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477648 Length=1678 Score E Sequences producing significant alignments: (Bits) Value AT3G03950.3 | Symbols: ECT1 | evolutionarily conserved C-termin... 2479 0.0 > AT3G03950.3 | Symbols: ECT1 | evolutionarily conserved C-terminal region 1 | chr3:1021260-1024009 FORWARD LENGTH=1771 Length=1771 Score = 2479 bits (1342), Expect = 0.0 Identities = 1590/1704 (93%), Gaps = 40/1704 (2%) Strand=Plus/Plus Query 1 AAAGATCACCGCCTTACGTTAAA---G-AGGAAGACGAAGAAAACAAAAAAGAACGGAAC 56 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 49 AAAGATCACCGCCTTACGTTAAAGGGGAAGGAAGACGAAGAAAACAAAAAAGAACGGAAC 108 Query 57 TTTCTAAAA-----C-C-CACC---A---ctctctctctctGGGTTTTTCGAGGTTGCGT 103 ||||||||| | | |||| | ||||||||||||||||||||||||||||||| Sbjct 109 TTTCTAAAACCCCCCACACACCAAAAGCGCTCTCTCTCTCTGGGTTTTTCGAGGTTGCGT 168 Query 104 TTGCTTTCGTTTGCCCAA-CTTCACAGACGTTTT-CTAGGGT-TTAAAGCTTATCCC-tt 159 |||||||| | ||||||| |||| || ||||| || | |||||||||||||| || Sbjct 169 TTGCTTTCATCTGCCCAACCTTC-TAG-GGTTTTCCT--TCTCTTAAAGCTTATCCCTTT 224 Query 160 tttttGCCTTCTCTCGACATGTCTGGAGCCGCTTCTTCTGATCGTCTCGCCACTAGCTTC 219 ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| Sbjct 225 TTTTTGCCTTCTCTCGATATGGCTGGAGCCGCTTCTTCTGATCGTCTCGTCACTAGCTTC 284 Query 220 CCTCTTCTGGAGACAGCAGATTTGTTTCAGGAGTTGTCTTTAGGTTCAGATGCAAATGAA 279 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 285 CCTCTTCTGGATACAGCAGATTTGTTTCAGGACTTGTCTTTAGGTTCAGATGCAAATGAA 344 Query 280 GTTCCTAGGAACCGTAATAAGGGTTCTTTTCAGCATCAGTATGGTCATGCACCTTATGGC 339 ||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||| Sbjct 345 GTTCCTATGAACTTTACTAAGGGTTCTTTTCAGCATCCGTATGGTCATGCACCTTATGGT 404 Query 340 GCATCTTCTCATGGAAGTGAACGAAGGCCAAATATGAATGTTGGCAATCTGCTAAATGGT 399 ||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| Sbjct 405 GCATCTTCTCATGGAAGTGAAAGAAGGCCAAACATGAATGCTGGCAATCTGCTAAATGGT 464 Query 400 GGAGACTCGATTGGTTCATACCCGTGGGGTTACATCCCAGCAAACTATCCTTCTGGTGGC 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 465 GGAGACTCGATTGGTTCATACCCGTGGGGTTACATCCCAGCAAACTATCCTTCTGGTGGC 524 Query 460 TACCCGGATCCGATGTTTGGTTATGACCGCAACAGCAATCACAATTCCTTTTCACATCTC 519 ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 525 TACCCTGATCCGAGGTTTGGTTATGACCGCAACAGCAATCACAGTTCCTTTTCACATCTC 584 Query 520 ATGAATCCACACAGCTCACAAGAAGCACTGAGTTTTGACCAATTTGGATATAATGATCAT 579 ||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct 585 ATGAATCCACACAGCTCACAAGAAGTACCAAGTTTTGACCAATTGGGATATAATGATCAT 644 Query 580 TTGTATTCCAACCATGGATTGTACGGACTTTACGGGAATGTAATTGACTCTGGTCATGCA 639 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 645 TTGTATTCCAACCATGGATTGTATGGACTTTACGGGAATGTAATTGACTCTGGTCATGCA 704 Query 640 TATGGAACTTTTGGCTATGATTCCTGGAAACTTGGGCGAGGATGGTATCCTGTTGATGGT 699 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 705 TATGGAACTTTTGGTTATGATTCCTGGAAACTTGGGCGAGGATGGTATCCCGTTGATGGT 764 Query 700 TATAGAAAGACCAGAAGCTTCAATCAAGGGCGTGGGTATAGTGATGAGAAAGCAGATAGG 759 |||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct 765 TATAGAAAGACCAGAAGCTTCAATCATGGGCGTGGTTACAGTGATGAGAAAGCAGATAGG 824 Query 760 CTTAATGAGCTTTGTCGAGGACCAAGGAGTAGTGATTTCAAGAGTCCACAAGTTCTTAAC 819 ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 825 CTTAATGAGCTATGTCGAGGACCAAGGAGTAGTGATTTCAAGAATCCACAAGTTCTTAAC 884 Query 820 TCTTCAATGCTAGAGGCAATGAAGCAAGATGTTTCAGCGGCAGATCTTCAGCGTTACAAC 879 |||||||||||||| |||||||||||||| |||||||| | |||||| ||||| ||||| Sbjct 885 TCTTCAATGCTAGATGCAATGAAGCAAGACGTTTCAGCAGTAGATCTCCAGCGCTACAAT 944 Query 880 GGGGAGAATTTCCCTGAAACATTCGTGAAAGCTAAATTCTTTGTGATCAAGTCTTACAGT 939 |||||||||||||||||| |||| |||||||| |||||||||||||||||||| ||||| Sbjct 945 GGGGAGAATTTCCCTGAATCATTTGTGAAAGCAAAATTCTTTGTGATCAAGTCATACAGC 1004 Query 940 GAAGATGATGTTCATAACAGTATTAAGTATGGTGCATGGTCGAGCACACCAACTGGCAAC 999 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1005 GAAGATGATGTTCATAACTGTATTAAGTATGGTGCATGGTCGAGCACACCAACTGGCAAC 1064 Query 1000 AAGAAGTTGCATGCTGCATATTATGAAGCCAAAGAAAA-TGCCCAAGAATGCCCTGTGTA 1058 ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 1065 AAGAAGTTGAATGCTGCATATTATGAAGCCAAAGAAAACT-CCCAAGAATGCCCTGTGTA 1123 Query 1059 TCTTCTGTTCTCGGTGAATGCAAGTGGGCAATTTGTCGGTCTTGCAGAGATGGTAGGCCC 1118 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 1124 TCTTCTGTTCTCGGTGAATGCAAGTGGGCAATTTGTTGGTCTTGCGGAGATGGTAGGCCC 1183 Query 1119 TGTTGATTTCAACAAGACAATGGAGTATTGGCAGCAAGATAAATGGATTGGTTGTTTCCC 1178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1184 TGTTGATTTCAACAAGACAATGGAGTATTGGCAGCAAGATAAATGGATTGGTTGTTTCCC 1243 Query 1179 TGTGAAGTGGCATATCATCAAAGACATACCAAACAGTCTCTTGAGACACATAACACTTGC 1238 |||||||||||||||||||||||||||||||||||||||||| |||||||| || || || Sbjct 1244 TGTGAAGTGGCATATCATCAAAGACATACCAAACAGTCTCTTAAGACACATTACCCTGGC 1303 Query 1239 GAATAATGAGAACAAGCCAGTCACTAATAGCAGAGACACTCAAGAGGTTAATCTGGAGCA 1298 |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 1304 GAATAACGAGAACAAGCCTGTCACTAATAGCAGAGACACTCAAGAGGTGAATCTGGAGCA 1363 Query 1299 TGGGACTAAGATCATAAAGATCTTCAAGGAGTATATGAGCAAGACATGTATACTTGATGA 1358 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1364 TGGGACCAAGATCATAAAGATCTTCAAGGAGTATATGAGCAAGACATGTATACTTGATGA 1423 Query 1359 TTACAAGTTCTATGAGACAAGGCAAAAGATCATCAGAGATAAGAAGATCAAGCAAAAGAA 1418 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1424 TTACAAGTTCTATGAGACAAGGCAGAAGATCATCAGAGACAAGAAGATCAAGCAAAAGAA 1483 Query 1419 ACAGGCCCTTGATGGAGCTTCCGGGGAAACAATTAACTTGTGTTGAAAGCTGGAATCGAT 1478 ||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| || Sbjct 1484 ACAGGCCCTTGATGGAGCTTCGGGGGAAACAATTAACTTGAGTTGAAAGATGGAATCAAT 1543 Query 1479 GCAAGGAAAGAAGA---TGACTTAATTAAAAGAACTTAGTTTTTGGATCATGTTTTCCCT 1535 |||||||||||||| |||||||||||||||||||||||||| | || ||||||| || Sbjct 1544 GCAAGGAAAGAAGAAGATGACTTAATTAAAAGAACTTAGTTTT-GAATTATGTTTTTTCT 1602 Query 1536 TCAGGGTTTGGATTTCTAAAAACCTAATACACACATCTTTAATCTGTGTGTTCTCTCTGC 1595 |||||||| |||||||||||||||||||||||| ||||||||||||||||| | ||| | Sbjct 1603 TCAGGGTTGGGATTTCTAAAAACCTAATACACA--TCTTTAATCTGTGTGTT-T-TCT-C 1657 Query 1596 TGCTGCTTATCTAAACAAAACTGACATTGTCTTTTGTTCCTTTTAAGGG-ACGCACATCT 1654 |||| | |||||||||||||| |||||||||||||||||| ||||||| |||||||||| Sbjct 1658 TGCT--T-ATCTAAACAAAACTTACATTGTCTTTTGTTCCTCTTAAGGGGACGCACATCT 1714 Query 1655 GATAAAATAAAAACTCATGCTTTC 1678 ||||||| ||||||||| |||||| Sbjct 1715 GATAAAACAAAAACTCAGGCTTTC 1738 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82931300340 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5